Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A386:A387
Extra
PDB:
ATOM 1 O3' G A 385 -87.337 -42.765 56.354 1.00 0.01 O
ATOM 2 P U A 386 -87.214 -41.177 56.585 1.00 1.03 P
ATOM 3 OP1 U A 386 -87.988 -40.517 55.514 1.00 1.03 O
ATOM 4 OP2 U A 386 -85.778 -40.857 56.717 1.00 1.03 O
ATOM 5 O5' U A 386 -87.948 -40.985 57.960 1.00 1.03 O
ATOM 6 C5' U A 386 -89.303 -41.334 58.073 1.00 1.03 C
ATOM 7 C4' U A 386 -90.082 -40.298 58.821 1.00 1.03 C
ATOM 8 O4' U A 386 -89.691 -40.327 60.205 1.00 1.03 O
ATOM 9 C3' U A 386 -89.883 -38.864 58.373 1.00 1.03 C
ATOM 10 O3' U A 386 -91.073 -38.147 58.633 1.00 1.03 O
ATOM 11 C2' U A 386 -88.818 -38.371 59.318 1.00 1.03 C
ATOM 12 O2' U A 386 -88.806 -36.983 59.464 1.00 1.03 O
ATOM 13 C1' U A 386 -89.250 -39.052 60.592 1.00 1.03 C
ATOM 14 N1 U A 386 -88.207 -39.251 61.574 1.00 1.04 N
ATOM 15 C2 U A 386 -88.446 -38.664 62.790 1.00 1.04 C
ATOM 16 O2 U A 386 -89.397 -37.926 63.001 1.00 1.04 O
ATOM 17 N3 U A 386 -87.511 -38.949 63.736 1.00 1.04 N
ATOM 18 C4 U A 386 -86.419 -39.761 63.584 1.00 1.04 C
ATOM 19 O4 U A 386 -85.688 -39.890 64.562 1.00 1.04 O
ATOM 20 C5 U A 386 -86.261 -40.380 62.307 1.00 1.04 C
ATOM 21 C6 U A 386 -87.169 -40.125 61.364 1.00 1.04 C
ATOM 22 P G A 387 -92.248 -38.146 57.556 1.00 5.00 P
ATOM 23 OP1 G A 387 -91.728 -38.820 56.354 1.00 5.00 O
ATOM 24 OP2 G A 387 -92.720 -36.752 57.467 1.00 5.00 O
ATOM 25 O5' G A 387 -93.374 -39.037 58.204 1.00 5.00 O
TER
ATOM 1 O3' U B 386 -91.073 -38.147 58.633 1.00 1.03 O
ATOM 2 P G B 387 -92.248 -38.146 57.556 1.00 5.00 P
ATOM 3 OP1 G B 387 -91.728 -38.820 56.354 1.00 5.00 O
ATOM 4 OP2 G B 387 -92.720 -36.752 57.467 1.00 5.00 O
ATOM 5 O5' G B 387 -93.374 -39.037 58.204 1.00 5.00 O
ATOM 6 C5' G B 387 -93.667 -38.969 59.579 1.00 5.00 C
ATOM 7 C4' G B 387 -93.821 -40.346 60.128 1.00 5.00 C
ATOM 8 O4' G B 387 -92.536 -40.950 60.280 1.00 5.00 O
ATOM 9 C3' G B 387 -94.457 -40.466 61.478 1.00 5.00 C
ATOM 10 O3' G B 387 -95.874 -40.433 61.389 1.00 5.00 O
ATOM 11 C2' G B 387 -93.911 -41.802 61.995 1.00 5.00 C
ATOM 12 O2' G B 387 -94.753 -42.873 61.610 1.00 5.00 O
ATOM 13 C1' G B 387 -92.595 -41.948 61.242 1.00 5.00 C
ATOM 14 N9 G B 387 -91.423 -41.820 62.096 1.00 5.19 N
ATOM 15 C8 G B 387 -91.173 -40.887 63.048 1.00 5.19 C
ATOM 16 N7 G B 387 -90.001 -41.034 63.596 1.00 5.19 N
ATOM 17 C5 G B 387 -89.460 -42.114 62.937 1.00 5.19 C
ATOM 18 C6 G B 387 -88.216 -42.736 63.101 1.00 5.19 C
ATOM 19 O6 G B 387 -87.313 -42.431 63.894 1.00 5.19 O
ATOM 20 N1 G B 387 -88.065 -43.810 62.235 1.00 5.19 N
ATOM 21 C2 G B 387 -88.981 -44.225 61.321 1.00 5.19 C
ATOM 22 N2 G B 387 -88.625 -45.286 60.575 1.00 5.19 N
ATOM 23 N3 G B 387 -90.152 -43.642 61.177 1.00 5.19 N
ATOM 24 C4 G B 387 -90.317 -42.606 62.006 1.00 5.19 C
ATOM 25 P G B 388 -96.680 -39.106 61.794 1.00 6.01 P
ATOM 26 OP1 G B 388 -98.110 -39.322 61.438 1.00 6.01 O
ATOM 27 OP2 G B 388 -95.962 -37.961 61.198 1.00 6.01 O
ATOM 28 O5' G B 388 -96.503 -39.091 63.371 1.00 6.01 O
TER
ATOM 2 P U A 386 -87.214 -41.177 56.585 1.00 1.03 P
ATOM 3 OP1 U A 386 -87.988 -40.517 55.514 1.00 1.03 O
ATOM 4 OP2 U A 386 -85.778 -40.857 56.717 1.00 1.03 O
ATOM 5 O5' U A 386 -87.948 -40.985 57.960 1.00 1.03 O
ATOM 6 C5' U A 386 -89.303 -41.334 58.073 1.00 1.03 C
ATOM 7 C4' U A 386 -90.082 -40.298 58.821 1.00 1.03 C
ATOM 8 O4' U A 386 -89.691 -40.327 60.205 1.00 1.03 O
ATOM 9 C3' U A 386 -89.883 -38.864 58.373 1.00 1.03 C
ATOM 10 O3' U A 386 -91.073 -38.147 58.633 1.00 1.03 O
ATOM 11 C2' U A 386 -88.818 -38.371 59.318 1.00 1.03 C
ATOM 12 O2' U A 386 -88.806 -36.983 59.464 1.00 1.03 O
ATOM 13 C1' U A 386 -89.250 -39.052 60.592 1.00 1.03 C
ATOM 14 N1 U A 386 -88.207 -39.251 61.574 1.00 1.04 N
ATOM 15 C2 U A 386 -88.446 -38.664 62.790 1.00 1.04 C
ATOM 16 O2 U A 386 -89.397 -37.926 63.001 1.00 1.04 O
ATOM 17 N3 U A 386 -87.511 -38.949 63.736 1.00 1.04 N
ATOM 18 C4 U A 386 -86.419 -39.761 63.584 1.00 1.04 C
ATOM 19 O4 U A 386 -85.688 -39.890 64.562 1.00 1.04 O
ATOM 20 C5 U A 386 -86.261 -40.380 62.307 1.00 1.04 C
ATOM 21 C6 U A 386 -87.169 -40.125 61.364 1.00 1.04 C
ATOM 22 P G A 387 -92.248 -38.146 57.556 1.00 5.00 P
ATOM 23 OP1 G A 387 -91.728 -38.820 56.354 1.00 5.00 O
ATOM 24 OP2 G A 387 -92.720 -36.752 57.467 1.00 5.00 O
ATOM 25 O5' G A 387 -93.374 -39.037 58.204 1.00 5.00 O
TER
ATOM 1 O3' U B 386 -91.073 -38.147 58.633 1.00 1.03 O
ATOM 2 P G B 387 -92.248 -38.146 57.556 1.00 5.00 P
ATOM 3 OP1 G B 387 -91.728 -38.820 56.354 1.00 5.00 O
ATOM 4 OP2 G B 387 -92.720 -36.752 57.467 1.00 5.00 O
ATOM 5 O5' G B 387 -93.374 -39.037 58.204 1.00 5.00 O
ATOM 6 C5' G B 387 -93.667 -38.969 59.579 1.00 5.00 C
ATOM 7 C4' G B 387 -93.821 -40.346 60.128 1.00 5.00 C
ATOM 8 O4' G B 387 -92.536 -40.950 60.280 1.00 5.00 O
ATOM 9 C3' G B 387 -94.457 -40.466 61.478 1.00 5.00 C
ATOM 10 O3' G B 387 -95.874 -40.433 61.389 1.00 5.00 O
ATOM 11 C2' G B 387 -93.911 -41.802 61.995 1.00 5.00 C
ATOM 12 O2' G B 387 -94.753 -42.873 61.610 1.00 5.00 O
ATOM 13 C1' G B 387 -92.595 -41.948 61.242 1.00 5.00 C
ATOM 14 N9 G B 387 -91.423 -41.820 62.096 1.00 5.19 N
ATOM 15 C8 G B 387 -91.173 -40.887 63.048 1.00 5.19 C
ATOM 16 N7 G B 387 -90.001 -41.034 63.596 1.00 5.19 N
ATOM 17 C5 G B 387 -89.460 -42.114 62.937 1.00 5.19 C
ATOM 18 C6 G B 387 -88.216 -42.736 63.101 1.00 5.19 C
ATOM 19 O6 G B 387 -87.313 -42.431 63.894 1.00 5.19 O
ATOM 20 N1 G B 387 -88.065 -43.810 62.235 1.00 5.19 N
ATOM 21 C2 G B 387 -88.981 -44.225 61.321 1.00 5.19 C
ATOM 22 N2 G B 387 -88.625 -45.286 60.575 1.00 5.19 N
ATOM 23 N3 G B 387 -90.152 -43.642 61.177 1.00 5.19 N
ATOM 24 C4 G B 387 -90.317 -42.606 62.006 1.00 5.19 C
ATOM 25 P G B 388 -96.680 -39.106 61.794 1.00 6.01 P
ATOM 26 OP1 G B 388 -98.110 -39.322 61.438 1.00 6.01 O
ATOM 27 OP2 G B 388 -95.962 -37.961 61.198 1.00 6.01 O
ATOM 28 O5' G B 388 -96.503 -39.091 63.371 1.00 6.01 O
TER
Atoms:
C4: (-86.419,-39.761,63.584)
N3: (-87.511,-38.949,63.736)
OP1: (-87.988,-40.517,55.514)
OP2: (-85.778,-40.857,56.717)
C2: (-88.446,-38.664,62.790)
C1': (-89.250,-39.052,60.592)
C3': (-89.883,-38.864,58.373)
O5': (-87.948,-40.985,57.960)
O4': (-89.691,-40.327,60.205)
C5': (-89.303,-41.334,58.073)
P: (-87.214,-41.177,56.585)
C4': (-90.082,-40.298,58.821)
C2': (-88.818,-38.371,59.318)
O2': (-88.806,-36.983,59.464)
N1: (-88.207,-39.251,61.574)
O4: (-85.688,-39.890,64.562)
O2: (-89.397,-37.926,63.001)
C6: (-87.169,-40.125,61.364)
C5: (-86.261,-40.380,62.307)
O3': (-91.073,-38.147,58.633)
N3: (-87.511,-38.949,63.736)
OP1: (-87.988,-40.517,55.514)
OP2: (-85.778,-40.857,56.717)
C2: (-88.446,-38.664,62.790)
C1': (-89.250,-39.052,60.592)
C3': (-89.883,-38.864,58.373)
O5': (-87.948,-40.985,57.960)
O4': (-89.691,-40.327,60.205)
C5': (-89.303,-41.334,58.073)
P: (-87.214,-41.177,56.585)
C4': (-90.082,-40.298,58.821)
C2': (-88.818,-38.371,59.318)
O2': (-88.806,-36.983,59.464)
N1: (-88.207,-39.251,61.574)
O4: (-85.688,-39.890,64.562)
O2: (-89.397,-37.926,63.001)
C6: (-87.169,-40.125,61.364)
C5: (-86.261,-40.380,62.307)
O3': (-91.073,-38.147,58.633)
OP1: (-91.728,-38.820,56.354)
OP2: (-92.720,-36.752,57.467)
C3': (-94.457,-40.466,61.478)
C1': (-92.595,-41.948,61.242)
C5': (-93.667,-38.969,59.579)
O6: (-87.313,-42.431,63.894)
O4': (-92.536,-40.950,60.280)
C8: (-91.173,-40.887,63.048)
C2: (-88.981,-44.225,61.321)
C6: (-88.216,-42.736,63.101)
C5: (-89.460,-42.114,62.937)
C4: (-90.317,-42.606,62.006)
P: (-92.248,-38.146,57.556)
C4': (-93.821,-40.346,60.128)
C2': (-93.911,-41.802,61.995)
O2': (-94.753,-42.873,61.610)
N1: (-88.065,-43.810,62.235)
N2: (-88.625,-45.286,60.575)
N3: (-90.152,-43.642,61.177)
N7: (-90.001,-41.034,63.596)
N9: (-91.423,-41.820,62.096)
O5': (-93.374,-39.037,58.204)
O3': (-95.874,-40.433,61.389)
OP2: (-92.720,-36.752,57.467)
C3': (-94.457,-40.466,61.478)
C1': (-92.595,-41.948,61.242)
C5': (-93.667,-38.969,59.579)
O6: (-87.313,-42.431,63.894)
O4': (-92.536,-40.950,60.280)
C8: (-91.173,-40.887,63.048)
C2: (-88.981,-44.225,61.321)
C6: (-88.216,-42.736,63.101)
C5: (-89.460,-42.114,62.937)
C4: (-90.317,-42.606,62.006)
P: (-92.248,-38.146,57.556)
C4': (-93.821,-40.346,60.128)
C2': (-93.911,-41.802,61.995)
O2': (-94.753,-42.873,61.610)
N1: (-88.065,-43.810,62.235)
N2: (-88.625,-45.286,60.575)
N3: (-90.152,-43.642,61.177)
N7: (-90.001,-41.034,63.596)
N9: (-91.423,-41.820,62.096)
O5': (-93.374,-39.037,58.204)
O3': (-95.874,-40.433,61.389)
Image (generated by PyMOL):