Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A225:A399
Extra
PDB:
ATOM 1 O3' U A 224 96.807 -58.042 -72.539 1.00 50.11 O
ATOM 2 P A A 225 97.382 -56.686 -71.896 1.00 61.55 P
ATOM 3 OP1 A A 225 98.825 -56.570 -72.250 1.00 70.24 O
ATOM 4 OP2 A A 225 96.949 -56.662 -70.458 1.00 43.98 O
ATOM 5 O5' A A 225 96.635 -55.516 -72.672 1.00 53.85 O
ATOM 6 C5' A A 225 96.663 -55.466 -74.085 1.00 57.93 C
ATOM 7 C4' A A 225 95.607 -54.517 -74.588 1.00 64.01 C
ATOM 8 O4' A A 225 94.273 -55.028 -74.332 1.00 69.23 O
ATOM 9 C3' A A 225 95.589 -53.161 -73.915 1.00 62.62 C
ATOM 10 O3' A A 225 96.577 -52.315 -74.460 1.00 63.76 O
ATOM 11 C2' A A 225 94.175 -52.645 -74.184 1.00 61.94 C
ATOM 12 O2' A A 225 94.006 -52.005 -75.422 1.00 66.99 O
ATOM 13 C1' A A 225 93.372 -53.935 -74.271 1.00 60.10 C
ATOM 14 N9 A A 225 92.475 -54.073 -73.134 1.00 63.02 N
ATOM 15 C8 A A 225 92.587 -54.839 -72.002 1.00 64.01 C
ATOM 16 N7 A A 225 91.572 -54.712 -71.182 1.00 64.47 N
ATOM 17 C5 A A 225 90.738 -53.804 -71.821 1.00 62.82 C
ATOM 18 C6 A A 225 89.494 -53.256 -71.478 1.00 58.41 C
ATOM 19 N6 A A 225 88.836 -53.551 -70.359 1.00 58.43 N
ATOM 20 N1 A A 225 88.941 -52.379 -72.335 1.00 57.95 N
ATOM 21 C2 A A 225 89.603 -52.075 -73.456 1.00 60.21 C
ATOM 22 N3 A A 225 90.770 -52.525 -73.895 1.00 60.90 N
ATOM 23 C4 A A 225 91.289 -53.399 -73.019 1.00 63.73 C
ATOM 24 P G A 226 97.226 -51.198 -73.532 1.00 52.02 P
ATOM 25 OP1 G A 226 98.352 -50.557 -74.247 1.00 57.10 O
ATOM 26 OP2 G A 226 97.441 -51.844 -72.209 1.00 53.55 O
ATOM 27 O5' G A 226 96.066 -50.133 -73.357 1.00 57.45 O
TER
ATOM 1 O3' U B 398 81.756 -49.522 -71.467 1.00 53.00 O
ATOM 2 P U B 399 81.993 -50.800 -70.512 1.00 51.97 P
ATOM 3 OP1 U B 399 82.061 -52.008 -71.376 1.00 41.01 O
ATOM 4 OP2 U B 399 81.043 -50.761 -69.357 1.00 44.64 O
ATOM 5 O5' U B 399 83.456 -50.575 -69.922 1.00 47.54 O
ATOM 6 C5' U B 399 83.963 -51.429 -68.899 1.00 52.70 C
ATOM 7 C4' U B 399 85.345 -50.990 -68.491 1.00 48.67 C
ATOM 8 O4' U B 399 86.303 -51.355 -69.518 1.00 47.01 O
ATOM 9 C3' U B 399 85.505 -49.489 -68.341 1.00 50.04 C
ATOM 10 O3' U B 399 85.068 -49.001 -67.083 1.00 45.66 O
ATOM 11 C2' U B 399 86.998 -49.290 -68.552 1.00 52.97 C
ATOM 12 O2' U B 399 87.736 -49.523 -67.364 1.00 56.42 O
ATOM 13 C1' U B 399 87.302 -50.352 -69.613 1.00 50.35 C
ATOM 14 N1 U B 399 87.292 -49.796 -70.976 1.00 47.05 N
ATOM 15 C2 U B 399 88.442 -49.172 -71.449 1.00 46.67 C
ATOM 16 O2 U B 399 89.467 -49.090 -70.812 1.00 51.15 O
ATOM 17 N3 U B 399 88.346 -48.656 -72.711 1.00 47.02 N
ATOM 18 C4 U B 399 87.258 -48.711 -73.542 1.00 48.69 C
ATOM 19 O4 U B 399 87.339 -48.238 -74.668 1.00 49.49 O
ATOM 20 C5 U B 399 86.123 -49.371 -72.999 1.00 49.78 C
ATOM 21 C6 U B 399 86.175 -49.876 -71.766 1.00 50.76 C
ATOM 22 P C B 400 84.441 -47.512 -66.983 1.00 56.54 P
ATOM 23 OP1 C B 400 84.147 -47.245 -65.544 1.00 62.04 O
ATOM 24 OP2 C B 400 83.359 -47.369 -67.999 1.00 63.37 O
ATOM 25 O5' C B 400 85.607 -46.517 -67.415 1.00 50.46 O
TER
ATOM 2 P A A 225 97.382 -56.686 -71.896 1.00 61.55 P
ATOM 3 OP1 A A 225 98.825 -56.570 -72.250 1.00 70.24 O
ATOM 4 OP2 A A 225 96.949 -56.662 -70.458 1.00 43.98 O
ATOM 5 O5' A A 225 96.635 -55.516 -72.672 1.00 53.85 O
ATOM 6 C5' A A 225 96.663 -55.466 -74.085 1.00 57.93 C
ATOM 7 C4' A A 225 95.607 -54.517 -74.588 1.00 64.01 C
ATOM 8 O4' A A 225 94.273 -55.028 -74.332 1.00 69.23 O
ATOM 9 C3' A A 225 95.589 -53.161 -73.915 1.00 62.62 C
ATOM 10 O3' A A 225 96.577 -52.315 -74.460 1.00 63.76 O
ATOM 11 C2' A A 225 94.175 -52.645 -74.184 1.00 61.94 C
ATOM 12 O2' A A 225 94.006 -52.005 -75.422 1.00 66.99 O
ATOM 13 C1' A A 225 93.372 -53.935 -74.271 1.00 60.10 C
ATOM 14 N9 A A 225 92.475 -54.073 -73.134 1.00 63.02 N
ATOM 15 C8 A A 225 92.587 -54.839 -72.002 1.00 64.01 C
ATOM 16 N7 A A 225 91.572 -54.712 -71.182 1.00 64.47 N
ATOM 17 C5 A A 225 90.738 -53.804 -71.821 1.00 62.82 C
ATOM 18 C6 A A 225 89.494 -53.256 -71.478 1.00 58.41 C
ATOM 19 N6 A A 225 88.836 -53.551 -70.359 1.00 58.43 N
ATOM 20 N1 A A 225 88.941 -52.379 -72.335 1.00 57.95 N
ATOM 21 C2 A A 225 89.603 -52.075 -73.456 1.00 60.21 C
ATOM 22 N3 A A 225 90.770 -52.525 -73.895 1.00 60.90 N
ATOM 23 C4 A A 225 91.289 -53.399 -73.019 1.00 63.73 C
ATOM 24 P G A 226 97.226 -51.198 -73.532 1.00 52.02 P
ATOM 25 OP1 G A 226 98.352 -50.557 -74.247 1.00 57.10 O
ATOM 26 OP2 G A 226 97.441 -51.844 -72.209 1.00 53.55 O
ATOM 27 O5' G A 226 96.066 -50.133 -73.357 1.00 57.45 O
TER
ATOM 1 O3' U B 398 81.756 -49.522 -71.467 1.00 53.00 O
ATOM 2 P U B 399 81.993 -50.800 -70.512 1.00 51.97 P
ATOM 3 OP1 U B 399 82.061 -52.008 -71.376 1.00 41.01 O
ATOM 4 OP2 U B 399 81.043 -50.761 -69.357 1.00 44.64 O
ATOM 5 O5' U B 399 83.456 -50.575 -69.922 1.00 47.54 O
ATOM 6 C5' U B 399 83.963 -51.429 -68.899 1.00 52.70 C
ATOM 7 C4' U B 399 85.345 -50.990 -68.491 1.00 48.67 C
ATOM 8 O4' U B 399 86.303 -51.355 -69.518 1.00 47.01 O
ATOM 9 C3' U B 399 85.505 -49.489 -68.341 1.00 50.04 C
ATOM 10 O3' U B 399 85.068 -49.001 -67.083 1.00 45.66 O
ATOM 11 C2' U B 399 86.998 -49.290 -68.552 1.00 52.97 C
ATOM 12 O2' U B 399 87.736 -49.523 -67.364 1.00 56.42 O
ATOM 13 C1' U B 399 87.302 -50.352 -69.613 1.00 50.35 C
ATOM 14 N1 U B 399 87.292 -49.796 -70.976 1.00 47.05 N
ATOM 15 C2 U B 399 88.442 -49.172 -71.449 1.00 46.67 C
ATOM 16 O2 U B 399 89.467 -49.090 -70.812 1.00 51.15 O
ATOM 17 N3 U B 399 88.346 -48.656 -72.711 1.00 47.02 N
ATOM 18 C4 U B 399 87.258 -48.711 -73.542 1.00 48.69 C
ATOM 19 O4 U B 399 87.339 -48.238 -74.668 1.00 49.49 O
ATOM 20 C5 U B 399 86.123 -49.371 -72.999 1.00 49.78 C
ATOM 21 C6 U B 399 86.175 -49.876 -71.766 1.00 50.76 C
ATOM 22 P C B 400 84.441 -47.512 -66.983 1.00 56.54 P
ATOM 23 OP1 C B 400 84.147 -47.245 -65.544 1.00 62.04 O
ATOM 24 OP2 C B 400 83.359 -47.369 -67.999 1.00 63.37 O
ATOM 25 O5' C B 400 85.607 -46.517 -67.415 1.00 50.46 O
TER
Atoms:
OP1: (98.825,-56.570,-72.250)
OP2: (96.949,-56.662,-70.458)
C3': (95.589,-53.161,-73.915)
C1': (93.372,-53.935,-74.271)
C5': (96.663,-55.466,-74.085)
O4': (94.273,-55.028,-74.332)
C8: (92.587,-54.839,-72.002)
O2': (94.006,-52.005,-75.422)
C6: (89.494,-53.256,-71.478)
C5: (90.738,-53.804,-71.821)
C4: (91.289,-53.399,-73.019)
P: (97.382,-56.686,-71.896)
C4': (95.607,-54.517,-74.588)
C2': (94.175,-52.645,-74.184)
C2: (89.603,-52.075,-73.456)
N1: (88.941,-52.379,-72.335)
N3: (90.770,-52.525,-73.895)
N6: (88.836,-53.551,-70.359)
N7: (91.572,-54.712,-71.182)
N9: (92.475,-54.073,-73.134)
O5': (96.635,-55.516,-72.672)
O3': (96.577,-52.315,-74.460)
OP2: (96.949,-56.662,-70.458)
C3': (95.589,-53.161,-73.915)
C1': (93.372,-53.935,-74.271)
C5': (96.663,-55.466,-74.085)
O4': (94.273,-55.028,-74.332)
C8: (92.587,-54.839,-72.002)
O2': (94.006,-52.005,-75.422)
C6: (89.494,-53.256,-71.478)
C5: (90.738,-53.804,-71.821)
C4: (91.289,-53.399,-73.019)
P: (97.382,-56.686,-71.896)
C4': (95.607,-54.517,-74.588)
C2': (94.175,-52.645,-74.184)
C2: (89.603,-52.075,-73.456)
N1: (88.941,-52.379,-72.335)
N3: (90.770,-52.525,-73.895)
N6: (88.836,-53.551,-70.359)
N7: (91.572,-54.712,-71.182)
N9: (92.475,-54.073,-73.134)
O5': (96.635,-55.516,-72.672)
O3': (96.577,-52.315,-74.460)
C4: (87.258,-48.711,-73.542)
N3: (88.346,-48.656,-72.711)
OP1: (82.061,-52.008,-71.376)
OP2: (81.043,-50.761,-69.357)
C2: (88.442,-49.172,-71.449)
C1': (87.302,-50.352,-69.613)
C3': (85.505,-49.489,-68.341)
O5': (83.456,-50.575,-69.922)
O4': (86.303,-51.355,-69.518)
C5': (83.963,-51.429,-68.899)
P: (81.993,-50.800,-70.512)
C4': (85.345,-50.990,-68.491)
C2': (86.998,-49.290,-68.552)
O2': (87.736,-49.523,-67.364)
N1: (87.292,-49.796,-70.976)
O4: (87.339,-48.238,-74.668)
O2: (89.467,-49.090,-70.812)
C6: (86.175,-49.876,-71.766)
C5: (86.123,-49.371,-72.999)
O3': (85.068,-49.001,-67.083)
N3: (88.346,-48.656,-72.711)
OP1: (82.061,-52.008,-71.376)
OP2: (81.043,-50.761,-69.357)
C2: (88.442,-49.172,-71.449)
C1': (87.302,-50.352,-69.613)
C3': (85.505,-49.489,-68.341)
O5': (83.456,-50.575,-69.922)
O4': (86.303,-51.355,-69.518)
C5': (83.963,-51.429,-68.899)
P: (81.993,-50.800,-70.512)
C4': (85.345,-50.990,-68.491)
C2': (86.998,-49.290,-68.552)
O2': (87.736,-49.523,-67.364)
N1: (87.292,-49.796,-70.976)
O4: (87.339,-48.238,-74.668)
O2: (89.467,-49.090,-70.812)
C6: (86.175,-49.876,-71.766)
C5: (86.123,-49.371,-72.999)
O3': (85.068,-49.001,-67.083)
Image (generated by PyMOL):