Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12132:12133
Extra
PDB:
ATOM 1 O3' A A2131 4.063 22.973 84.459 1.00 47.78 O
ATOM 2 P G A2132 2.945 21.836 84.472 1.00 45.84 P
ATOM 3 OP1 G A2132 1.709 22.462 83.915 1.00 46.15 O
ATOM 4 OP2 G A2132 2.924 21.231 85.845 1.00 45.86 O
ATOM 5 O5' G A2132 3.524 20.761 83.443 1.00 45.42 O
ATOM 6 C5' G A2132 4.673 19.993 83.762 1.00 45.09 C
ATOM 7 C4' G A2132 4.491 18.562 83.386 1.00 44.81 C
ATOM 8 O4' G A2132 3.582 17.923 84.317 1.00 44.93 O
ATOM 9 C3' G A2132 3.862 18.324 82.046 1.00 44.75 C
ATOM 10 O3' G A2132 4.783 18.408 81.012 1.00 44.52 O
ATOM 11 C2' G A2132 3.279 16.938 82.203 1.00 44.61 C
ATOM 12 O2' G A2132 4.316 15.981 82.159 1.00 44.25 O
ATOM 13 C1' G A2132 2.764 16.995 83.633 1.00 44.84 C
ATOM 14 N9 G A2132 1.341 17.444 83.701 1.00 45.19 N
ATOM 15 C8 G A2132 0.783 18.529 84.357 1.00 45.56 C
ATOM 16 N7 G A2132 -0.509 18.621 84.253 1.00 45.81 N
ATOM 17 C5 G A2132 -0.831 17.547 83.453 1.00 45.59 C
ATOM 18 C6 G A2132 -2.066 17.117 82.944 1.00 45.71 C
ATOM 19 O6 G A2132 -3.149 17.640 83.137 1.00 46.05 O
ATOM 20 N1 G A2132 -2.013 15.968 82.169 1.00 45.43 N
ATOM 21 C2 G A2132 -0.871 15.297 81.908 1.00 45.07 C
ATOM 22 N2 G A2132 -0.947 14.207 81.149 1.00 44.84 N
ATOM 23 N3 G A2132 0.288 15.682 82.379 1.00 44.95 N
ATOM 24 C4 G A2132 0.261 16.809 83.126 1.00 45.22 C
ATOM 25 P A A2133 4.405 19.158 79.645 1.00 46.52 P
ATOM 26 OP1 A A2133 5.718 19.511 78.979 1.00 46.32 O
ATOM 27 OP2 A A2133 3.428 20.258 79.976 1.00 46.93 O
ATOM 28 O5' A A2133 3.648 18.041 78.793 1.00 46.38 O
TER
ATOM 1 O3' G B2132 4.783 18.408 81.012 1.00 44.52 O
ATOM 2 P A B2133 4.405 19.158 79.645 1.00 46.52 P
ATOM 3 OP1 A B2133 5.718 19.511 78.979 1.00 46.32 O
ATOM 4 OP2 A B2133 3.428 20.258 79.976 1.00 46.93 O
ATOM 5 O5' A B2133 3.648 18.041 78.793 1.00 46.38 O
ATOM 6 C5' A B2133 4.275 16.837 78.407 1.00 46.03 C
ATOM 7 C4' A B2133 3.349 16.028 77.550 1.00 46.00 C
ATOM 8 O4' A B2133 2.337 15.392 78.387 1.00 46.12 O
ATOM 9 C3' A B2133 2.546 16.823 76.538 1.00 46.23 C
ATOM 10 O3' A B2133 3.260 17.065 75.346 1.00 46.09 O
ATOM 11 C2' A B2133 1.315 15.962 76.341 1.00 46.30 C
ATOM 12 O2' A B2133 1.622 14.870 75.510 1.00 46.02 O
ATOM 13 C1' A B2133 1.083 15.436 77.744 1.00 46.32 C
ATOM 14 N9 A B2133 0.205 16.326 78.504 1.00 46.69 N
ATOM 15 C8 A B2133 0.492 17.153 79.557 1.00 46.85 C
ATOM 16 N7 A B2133 -0.515 17.854 80.011 1.00 47.21 N
ATOM 17 C5 A B2133 -1.537 17.432 79.179 1.00 47.27 C
ATOM 18 C6 A B2133 -2.892 17.780 79.106 1.00 47.61 C
ATOM 19 N6 A B2133 -3.460 18.670 79.909 1.00 47.95 N
ATOM 20 N1 A B2133 -3.658 17.170 78.177 1.00 47.60 N
ATOM 21 C2 A B2133 -3.080 16.281 77.365 1.00 47.28 C
ATOM 22 N3 A B2133 -1.822 15.877 77.315 1.00 46.95 N
ATOM 23 C4 A B2133 -1.101 16.500 78.258 1.00 46.96 C
ATOM 24 P U B2134 2.923 18.361 74.456 1.00 45.80 P
ATOM 25 OP1 U B2134 3.787 18.328 73.247 1.00 45.59 O
ATOM 26 OP2 U B2134 2.984 19.534 75.348 1.00 46.05 O
ATOM 27 O5' U B2134 1.438 18.096 74.030 1.00 46.01 O
TER
ATOM 2 P G A2132 2.945 21.836 84.472 1.00 45.84 P
ATOM 3 OP1 G A2132 1.709 22.462 83.915 1.00 46.15 O
ATOM 4 OP2 G A2132 2.924 21.231 85.845 1.00 45.86 O
ATOM 5 O5' G A2132 3.524 20.761 83.443 1.00 45.42 O
ATOM 6 C5' G A2132 4.673 19.993 83.762 1.00 45.09 C
ATOM 7 C4' G A2132 4.491 18.562 83.386 1.00 44.81 C
ATOM 8 O4' G A2132 3.582 17.923 84.317 1.00 44.93 O
ATOM 9 C3' G A2132 3.862 18.324 82.046 1.00 44.75 C
ATOM 10 O3' G A2132 4.783 18.408 81.012 1.00 44.52 O
ATOM 11 C2' G A2132 3.279 16.938 82.203 1.00 44.61 C
ATOM 12 O2' G A2132 4.316 15.981 82.159 1.00 44.25 O
ATOM 13 C1' G A2132 2.764 16.995 83.633 1.00 44.84 C
ATOM 14 N9 G A2132 1.341 17.444 83.701 1.00 45.19 N
ATOM 15 C8 G A2132 0.783 18.529 84.357 1.00 45.56 C
ATOM 16 N7 G A2132 -0.509 18.621 84.253 1.00 45.81 N
ATOM 17 C5 G A2132 -0.831 17.547 83.453 1.00 45.59 C
ATOM 18 C6 G A2132 -2.066 17.117 82.944 1.00 45.71 C
ATOM 19 O6 G A2132 -3.149 17.640 83.137 1.00 46.05 O
ATOM 20 N1 G A2132 -2.013 15.968 82.169 1.00 45.43 N
ATOM 21 C2 G A2132 -0.871 15.297 81.908 1.00 45.07 C
ATOM 22 N2 G A2132 -0.947 14.207 81.149 1.00 44.84 N
ATOM 23 N3 G A2132 0.288 15.682 82.379 1.00 44.95 N
ATOM 24 C4 G A2132 0.261 16.809 83.126 1.00 45.22 C
ATOM 25 P A A2133 4.405 19.158 79.645 1.00 46.52 P
ATOM 26 OP1 A A2133 5.718 19.511 78.979 1.00 46.32 O
ATOM 27 OP2 A A2133 3.428 20.258 79.976 1.00 46.93 O
ATOM 28 O5' A A2133 3.648 18.041 78.793 1.00 46.38 O
TER
ATOM 1 O3' G B2132 4.783 18.408 81.012 1.00 44.52 O
ATOM 2 P A B2133 4.405 19.158 79.645 1.00 46.52 P
ATOM 3 OP1 A B2133 5.718 19.511 78.979 1.00 46.32 O
ATOM 4 OP2 A B2133 3.428 20.258 79.976 1.00 46.93 O
ATOM 5 O5' A B2133 3.648 18.041 78.793 1.00 46.38 O
ATOM 6 C5' A B2133 4.275 16.837 78.407 1.00 46.03 C
ATOM 7 C4' A B2133 3.349 16.028 77.550 1.00 46.00 C
ATOM 8 O4' A B2133 2.337 15.392 78.387 1.00 46.12 O
ATOM 9 C3' A B2133 2.546 16.823 76.538 1.00 46.23 C
ATOM 10 O3' A B2133 3.260 17.065 75.346 1.00 46.09 O
ATOM 11 C2' A B2133 1.315 15.962 76.341 1.00 46.30 C
ATOM 12 O2' A B2133 1.622 14.870 75.510 1.00 46.02 O
ATOM 13 C1' A B2133 1.083 15.436 77.744 1.00 46.32 C
ATOM 14 N9 A B2133 0.205 16.326 78.504 1.00 46.69 N
ATOM 15 C8 A B2133 0.492 17.153 79.557 1.00 46.85 C
ATOM 16 N7 A B2133 -0.515 17.854 80.011 1.00 47.21 N
ATOM 17 C5 A B2133 -1.537 17.432 79.179 1.00 47.27 C
ATOM 18 C6 A B2133 -2.892 17.780 79.106 1.00 47.61 C
ATOM 19 N6 A B2133 -3.460 18.670 79.909 1.00 47.95 N
ATOM 20 N1 A B2133 -3.658 17.170 78.177 1.00 47.60 N
ATOM 21 C2 A B2133 -3.080 16.281 77.365 1.00 47.28 C
ATOM 22 N3 A B2133 -1.822 15.877 77.315 1.00 46.95 N
ATOM 23 C4 A B2133 -1.101 16.500 78.258 1.00 46.96 C
ATOM 24 P U B2134 2.923 18.361 74.456 1.00 45.80 P
ATOM 25 OP1 U B2134 3.787 18.328 73.247 1.00 45.59 O
ATOM 26 OP2 U B2134 2.984 19.534 75.348 1.00 46.05 O
ATOM 27 O5' U B2134 1.438 18.096 74.030 1.00 46.01 O
TER
Atoms:
OP1: (1.709,22.462,83.915)
OP2: (2.924,21.231,85.845)
C3': (3.862,18.324,82.046)
C1': (2.764,16.995,83.633)
C5': (4.673,19.993,83.762)
O6: (-3.149,17.640,83.137)
O4': (3.582,17.923,84.317)
C8: (0.783,18.529,84.357)
C2: (-0.871,15.297,81.908)
C6: (-2.066,17.117,82.944)
C5: (-0.831,17.547,83.453)
C4: (0.261,16.809,83.126)
P: (2.945,21.836,84.472)
C4': (4.491,18.562,83.386)
C2': (3.279,16.938,82.203)
O2': (4.316,15.981,82.159)
N1: (-2.013,15.968,82.169)
N2: (-0.947,14.207,81.149)
N3: (0.288,15.682,82.379)
N7: (-0.509,18.621,84.253)
N9: (1.341,17.444,83.701)
O5': (3.524,20.761,83.443)
O3': (4.783,18.408,81.012)
OP2: (2.924,21.231,85.845)
C3': (3.862,18.324,82.046)
C1': (2.764,16.995,83.633)
C5': (4.673,19.993,83.762)
O6: (-3.149,17.640,83.137)
O4': (3.582,17.923,84.317)
C8: (0.783,18.529,84.357)
C2: (-0.871,15.297,81.908)
C6: (-2.066,17.117,82.944)
C5: (-0.831,17.547,83.453)
C4: (0.261,16.809,83.126)
P: (2.945,21.836,84.472)
C4': (4.491,18.562,83.386)
C2': (3.279,16.938,82.203)
O2': (4.316,15.981,82.159)
N1: (-2.013,15.968,82.169)
N2: (-0.947,14.207,81.149)
N3: (0.288,15.682,82.379)
N7: (-0.509,18.621,84.253)
N9: (1.341,17.444,83.701)
O5': (3.524,20.761,83.443)
O3': (4.783,18.408,81.012)
OP1: (5.718,19.511,78.979)
OP2: (3.428,20.258,79.976)
C3': (2.546,16.823,76.538)
C1': (1.083,15.436,77.744)
C5': (4.275,16.837,78.407)
O4': (2.337,15.392,78.387)
C8: (0.492,17.153,79.557)
O2': (1.622,14.870,75.510)
C6: (-2.892,17.780,79.106)
C5: (-1.537,17.432,79.179)
C4: (-1.101,16.500,78.258)
P: (4.405,19.158,79.645)
C4': (3.349,16.028,77.550)
C2': (1.315,15.962,76.341)
C2: (-3.080,16.281,77.365)
N1: (-3.658,17.170,78.177)
N3: (-1.822,15.877,77.315)
N6: (-3.460,18.670,79.909)
N7: (-0.515,17.854,80.011)
N9: (0.205,16.326,78.504)
O5': (3.648,18.041,78.793)
O3': (3.260,17.065,75.346)
OP2: (3.428,20.258,79.976)
C3': (2.546,16.823,76.538)
C1': (1.083,15.436,77.744)
C5': (4.275,16.837,78.407)
O4': (2.337,15.392,78.387)
C8: (0.492,17.153,79.557)
O2': (1.622,14.870,75.510)
C6: (-2.892,17.780,79.106)
C5: (-1.537,17.432,79.179)
C4: (-1.101,16.500,78.258)
P: (4.405,19.158,79.645)
C4': (3.349,16.028,77.550)
C2': (1.315,15.962,76.341)
C2: (-3.080,16.281,77.365)
N1: (-3.658,17.170,78.177)
N3: (-1.822,15.877,77.315)
N6: (-3.460,18.670,79.909)
N7: (-0.515,17.854,80.011)
N9: (0.205,16.326,78.504)
O5': (3.648,18.041,78.793)
O3': (3.260,17.065,75.346)
Image (generated by PyMOL):