ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1M5O:B5:B6

Extra

PDB:
ATOM 1 O3' A A 4 81.500 23.404 20.732 1.00106.83 O
ATOM 2 P G A 5 82.465 24.099 21.818 1.00108.06 P
ATOM 3 OP1 G A 5 83.812 24.261 21.215 1.00111.70 O
ATOM 4 OP2 G A 5 82.318 23.365 23.101 1.00106.39 O
ATOM 5 O5' G A 5 81.840 25.549 22.012 1.00 90.90 O
ATOM 6 C5' G A 5 81.800 26.464 20.928 1.00 93.30 C
ATOM 7 C4' G A 5 81.234 27.781 21.383 1.00100.64 C
ATOM 8 O4' G A 5 79.832 27.622 21.729 1.00 95.33 O
ATOM 9 C3' G A 5 81.854 28.340 22.648 1.00104.97 C
ATOM 10 O3' G A 5 83.086 28.992 22.372 1.00108.06 O
ATOM 11 C2' G A 5 80.768 29.292 23.128 1.00103.26 C
ATOM 12 O2' G A 5 80.744 30.511 22.410 1.00101.18 O
ATOM 13 C1' G A 5 79.510 28.480 22.813 1.00 99.75 C
ATOM 14 N9 G A 5 79.083 27.651 23.936 1.00 97.05 N
ATOM 15 C8 G A 5 79.395 26.331 24.159 1.00 96.59 C
ATOM 16 N7 G A 5 78.867 25.857 25.255 1.00 95.19 N
ATOM 17 C5 G A 5 78.164 26.929 25.788 1.00 93.01 C
ATOM 18 C6 G A 5 77.390 27.019 26.968 1.00 93.18 C
ATOM 19 O6 G A 5 77.159 26.142 27.806 1.00 94.79 O
ATOM 20 N1 G A 5 76.855 28.291 27.132 1.00 94.41 N
ATOM 21 C2 G A 5 77.040 29.342 26.267 1.00 94.64 C
ATOM 22 N2 G A 5 76.440 30.492 26.598 1.00 96.53 N
ATOM 23 N3 G A 5 77.758 29.270 25.161 1.00 93.46 N
ATOM 24 C4 G A 5 78.288 28.043 24.986 1.00 94.19 C
ATOM 25 P A A 6 84.236 29.020 23.493 1.00109.98 P
ATOM 26 OP1 A A 6 85.467 29.584 22.882 1.00112.12 O
ATOM 27 OP2 A A 6 84.282 27.677 24.133 1.00103.69 O
ATOM 28 O5' A A 6 83.682 30.069 24.552 1.00 82.40 O
TER

ATOM 1 O3' G B 5 83.086 28.992 22.372 1.00108.06 O
ATOM 2 P A B 6 84.236 29.020 23.493 1.00109.98 P
ATOM 3 OP1 A B 6 85.467 29.584 22.882 1.00112.12 O
ATOM 4 OP2 A B 6 84.282 27.677 24.133 1.00103.69 O
ATOM 5 O5' A B 6 83.682 30.069 24.552 1.00 82.40 O
ATOM 6 C5' A B 6 83.223 31.344 24.124 1.00 86.86 C
ATOM 7 C4' A B 6 82.331 31.947 25.173 1.00 94.47 C
ATOM 8 O4' A B 6 81.121 31.153 25.298 1.00 95.18 O
ATOM 9 C3' A B 6 82.921 31.947 26.570 1.00103.04 C
ATOM 10 O3' A B 6 83.796 33.053 26.752 1.00113.12 O
ATOM 11 C2' A B 6 81.670 32.019 27.436 1.00100.73 C
ATOM 12 O2' A B 6 81.124 33.322 27.519 1.00 98.19 O
ATOM 13 C1' A B 6 80.723 31.100 26.660 1.00 96.56 C
ATOM 14 N9 A B 6 80.806 29.706 27.099 1.00 89.05 N
ATOM 15 C8 A B 6 81.601 28.716 26.578 1.00 88.22 C
ATOM 16 N7 A B 6 81.472 27.560 27.182 1.00 86.74 N
ATOM 17 C5 A B 6 80.526 27.804 28.167 1.00 85.82 C
ATOM 18 C6 A B 6 79.951 26.978 29.147 1.00 84.83 C
ATOM 19 N6 A B 6 80.261 25.687 29.299 1.00 83.31 N
ATOM 20 N1 A B 6 79.036 27.529 29.975 1.00 83.19 N
ATOM 21 C2 A B 6 78.726 28.824 29.816 1.00 85.69 C
ATOM 22 N3 A B 6 79.197 29.702 28.932 1.00 85.91 N
ATOM 23 C4 A B 6 80.104 29.121 28.127 1.00 86.48 C
ATOM 24 P G B 7 85.121 32.878 27.647 1.00114.91 P
ATOM 25 OP1 G B 7 85.962 34.089 27.474 1.00113.72 O
ATOM 26 OP2 G B 7 85.691 31.539 27.342 1.00101.38 O
ATOM 27 O5' G B 7 84.556 32.860 29.136 1.00110.41 O
TER

Atoms:
OP1: (83.812,24.261,21.215)
OP2: (82.318,23.365,23.101)
C3': (81.854,28.340,22.648)
C1': (79.510,28.480,22.813)
C5': (81.800,26.464,20.928)
O6: (77.159,26.142,27.806)
O4': (79.832,27.622,21.729)
C8: (79.395,26.331,24.159)
C2: (77.040,29.342,26.267)
C6: (77.390,27.019,26.968)
C5: (78.164,26.929,25.788)
C4: (78.288,28.043,24.986)
P: (82.465,24.099,21.818)
C4': (81.234,27.781,21.383)
C2': (80.768,29.292,23.128)
O2': (80.744,30.511,22.410)
N1: (76.855,28.291,27.132)
N2: (76.440,30.492,26.598)
N3: (77.758,29.270,25.161)
N7: (78.867,25.857,25.255)
N9: (79.083,27.651,23.936)
O5': (81.840,25.549,22.012)
O3': (83.086,28.992,22.372)
OP1: (85.467,29.584,22.882)
OP2: (84.282,27.677,24.133)
C3': (82.921,31.947,26.570)
C1': (80.723,31.100,26.660)
C5': (83.223,31.344,24.124)
O4': (81.121,31.153,25.298)
C8: (81.601,28.716,26.578)
O2': (81.124,33.322,27.519)
C6: (79.951,26.978,29.147)
C5: (80.526,27.804,28.167)
C4: (80.104,29.121,28.127)
P: (84.236,29.020,23.493)
C4': (82.331,31.947,25.173)
C2': (81.670,32.019,27.436)
C2: (78.726,28.824,29.816)
N1: (79.036,27.529,29.975)
N3: (79.197,29.702,28.932)
N6: (80.261,25.687,29.299)
N7: (81.472,27.560,27.182)
N9: (80.806,29.706,27.099)
O5': (83.682,30.069,24.552)
O3': (83.796,33.053,26.752)
Image (generated by PyMOL):
PyMOL image
show in jmol