Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NDB:M46:M47
Extra
PDB:
ATOM 1 O3' G A 45 -55.965 22.952 -35.611 1.00 58.46 O
ATOM 2 P G A 46 -55.808 23.618 -37.062 1.00 58.56 P
ATOM 3 OP1 G A 46 -56.146 22.452 -37.897 1.00 56.66 O
ATOM 4 OP2 G A 46 -54.506 24.304 -37.325 1.00 57.61 O
ATOM 5 O5' G A 46 -56.857 24.862 -37.002 1.00 55.90 O
ATOM 6 C5' G A 46 -58.008 24.715 -36.242 1.00 55.64 C
ATOM 7 C4' G A 46 -59.193 25.627 -36.473 1.00 58.97 C
ATOM 8 O4' G A 46 -59.131 26.446 -35.297 1.00 60.94 O
ATOM 9 C3' G A 46 -59.265 26.658 -37.597 1.00 61.71 C
ATOM 10 O3' G A 46 -60.089 26.267 -38.705 1.00 61.96 O
ATOM 11 C2' G A 46 -59.863 27.896 -36.911 1.00 62.15 C
ATOM 12 O2' G A 46 -61.250 27.757 -36.659 1.00 66.52 O
ATOM 13 C1' G A 46 -59.146 27.841 -35.582 1.00 59.91 C
ATOM 14 N9 G A 46 -57.809 28.459 -35.580 1.00 58.24 N
ATOM 15 C8 G A 46 -56.567 27.865 -35.656 1.00 58.13 C
ATOM 16 N7 G A 46 -55.568 28.701 -35.638 1.00 57.05 N
ATOM 17 C5 G A 46 -56.197 29.921 -35.543 1.00 56.49 C
ATOM 18 C6 G A 46 -55.635 31.192 -35.476 1.00 56.48 C
ATOM 19 O6 G A 46 -54.440 31.443 -35.492 1.00 57.47 O
ATOM 20 N1 G A 46 -56.584 32.203 -35.391 1.00 58.08 N
ATOM 21 C2 G A 46 -57.950 31.982 -35.367 1.00 59.43 C
ATOM 22 N2 G A 46 -58.767 33.044 -35.269 1.00 59.62 N
ATOM 23 N3 G A 46 -58.494 30.771 -35.403 1.00 59.96 N
ATOM 24 C4 G A 46 -57.556 29.796 -35.497 1.00 57.81 C
ATOM 25 P A A 47 -59.716 26.886 -40.136 1.00 62.33 P
ATOM 26 OP1 A A 47 -60.619 26.153 -41.049 1.00 64.44 O
ATOM 27 OP2 A A 47 -58.253 26.823 -40.378 1.00 58.00 O
ATOM 28 O5' A A 47 -60.217 28.416 -40.014 1.00 63.43 O
TER
ATOM 1 O3' G B 46 -60.089 26.267 -38.705 1.00 61.96 O
ATOM 2 P A B 47 -59.716 26.886 -40.136 1.00 62.33 P
ATOM 3 OP1 A B 47 -60.619 26.153 -41.049 1.00 64.44 O
ATOM 4 OP2 A B 47 -58.253 26.823 -40.378 1.00 58.00 O
ATOM 5 O5' A B 47 -60.217 28.416 -40.014 1.00 63.43 O
ATOM 6 C5' A B 47 -61.637 28.717 -39.935 1.00 65.46 C
ATOM 7 C4' A B 47 -61.845 30.195 -39.694 1.00 67.53 C
ATOM 8 O4' A B 47 -60.949 30.499 -38.613 1.00 68.00 O
ATOM 9 C3' A B 47 -61.344 31.163 -40.773 1.00 69.99 C
ATOM 10 O3' A B 47 -62.264 31.420 -41.838 1.00 74.32 O
ATOM 11 C2' A B 47 -60.988 32.445 -40.020 1.00 68.15 C
ATOM 12 O2' A B 47 -62.082 33.284 -39.699 1.00 66.59 O
ATOM 13 C1' A B 47 -60.418 31.828 -38.747 1.00 68.45 C
ATOM 14 N9 A B 47 -58.955 31.802 -38.771 1.00 67.10 N
ATOM 15 C8 A B 47 -58.166 30.677 -38.882 1.00 67.69 C
ATOM 16 N7 A B 47 -56.875 30.933 -38.885 1.00 67.31 N
ATOM 17 C5 A B 47 -56.837 32.326 -38.777 1.00 66.15 C
ATOM 18 C6 A B 47 -55.755 33.223 -38.734 1.00 66.06 C
ATOM 19 N6 A B 47 -54.486 32.792 -38.790 1.00 65.91 N
ATOM 20 N1 A B 47 -56.013 34.540 -38.627 1.00 66.15 N
ATOM 21 C2 A B 47 -57.295 34.916 -38.565 1.00 67.56 C
ATOM 22 N3 A B 47 -58.399 34.166 -38.588 1.00 67.30 N
ATOM 23 C4 A B 47 -58.098 32.870 -38.702 1.00 65.77 C
ATOM 24 P G B 48 -61.697 31.363 -43.345 1.00 77.71 P
ATOM 25 OP1 G B 48 -62.909 31.181 -44.149 1.00 79.44 O
ATOM 26 OP2 G B 48 -60.582 30.375 -43.492 1.00 76.79 O
ATOM 27 O5' G B 48 -61.106 32.825 -43.621 1.00 77.02 O
TER
ATOM 2 P G A 46 -55.808 23.618 -37.062 1.00 58.56 P
ATOM 3 OP1 G A 46 -56.146 22.452 -37.897 1.00 56.66 O
ATOM 4 OP2 G A 46 -54.506 24.304 -37.325 1.00 57.61 O
ATOM 5 O5' G A 46 -56.857 24.862 -37.002 1.00 55.90 O
ATOM 6 C5' G A 46 -58.008 24.715 -36.242 1.00 55.64 C
ATOM 7 C4' G A 46 -59.193 25.627 -36.473 1.00 58.97 C
ATOM 8 O4' G A 46 -59.131 26.446 -35.297 1.00 60.94 O
ATOM 9 C3' G A 46 -59.265 26.658 -37.597 1.00 61.71 C
ATOM 10 O3' G A 46 -60.089 26.267 -38.705 1.00 61.96 O
ATOM 11 C2' G A 46 -59.863 27.896 -36.911 1.00 62.15 C
ATOM 12 O2' G A 46 -61.250 27.757 -36.659 1.00 66.52 O
ATOM 13 C1' G A 46 -59.146 27.841 -35.582 1.00 59.91 C
ATOM 14 N9 G A 46 -57.809 28.459 -35.580 1.00 58.24 N
ATOM 15 C8 G A 46 -56.567 27.865 -35.656 1.00 58.13 C
ATOM 16 N7 G A 46 -55.568 28.701 -35.638 1.00 57.05 N
ATOM 17 C5 G A 46 -56.197 29.921 -35.543 1.00 56.49 C
ATOM 18 C6 G A 46 -55.635 31.192 -35.476 1.00 56.48 C
ATOM 19 O6 G A 46 -54.440 31.443 -35.492 1.00 57.47 O
ATOM 20 N1 G A 46 -56.584 32.203 -35.391 1.00 58.08 N
ATOM 21 C2 G A 46 -57.950 31.982 -35.367 1.00 59.43 C
ATOM 22 N2 G A 46 -58.767 33.044 -35.269 1.00 59.62 N
ATOM 23 N3 G A 46 -58.494 30.771 -35.403 1.00 59.96 N
ATOM 24 C4 G A 46 -57.556 29.796 -35.497 1.00 57.81 C
ATOM 25 P A A 47 -59.716 26.886 -40.136 1.00 62.33 P
ATOM 26 OP1 A A 47 -60.619 26.153 -41.049 1.00 64.44 O
ATOM 27 OP2 A A 47 -58.253 26.823 -40.378 1.00 58.00 O
ATOM 28 O5' A A 47 -60.217 28.416 -40.014 1.00 63.43 O
TER
ATOM 1 O3' G B 46 -60.089 26.267 -38.705 1.00 61.96 O
ATOM 2 P A B 47 -59.716 26.886 -40.136 1.00 62.33 P
ATOM 3 OP1 A B 47 -60.619 26.153 -41.049 1.00 64.44 O
ATOM 4 OP2 A B 47 -58.253 26.823 -40.378 1.00 58.00 O
ATOM 5 O5' A B 47 -60.217 28.416 -40.014 1.00 63.43 O
ATOM 6 C5' A B 47 -61.637 28.717 -39.935 1.00 65.46 C
ATOM 7 C4' A B 47 -61.845 30.195 -39.694 1.00 67.53 C
ATOM 8 O4' A B 47 -60.949 30.499 -38.613 1.00 68.00 O
ATOM 9 C3' A B 47 -61.344 31.163 -40.773 1.00 69.99 C
ATOM 10 O3' A B 47 -62.264 31.420 -41.838 1.00 74.32 O
ATOM 11 C2' A B 47 -60.988 32.445 -40.020 1.00 68.15 C
ATOM 12 O2' A B 47 -62.082 33.284 -39.699 1.00 66.59 O
ATOM 13 C1' A B 47 -60.418 31.828 -38.747 1.00 68.45 C
ATOM 14 N9 A B 47 -58.955 31.802 -38.771 1.00 67.10 N
ATOM 15 C8 A B 47 -58.166 30.677 -38.882 1.00 67.69 C
ATOM 16 N7 A B 47 -56.875 30.933 -38.885 1.00 67.31 N
ATOM 17 C5 A B 47 -56.837 32.326 -38.777 1.00 66.15 C
ATOM 18 C6 A B 47 -55.755 33.223 -38.734 1.00 66.06 C
ATOM 19 N6 A B 47 -54.486 32.792 -38.790 1.00 65.91 N
ATOM 20 N1 A B 47 -56.013 34.540 -38.627 1.00 66.15 N
ATOM 21 C2 A B 47 -57.295 34.916 -38.565 1.00 67.56 C
ATOM 22 N3 A B 47 -58.399 34.166 -38.588 1.00 67.30 N
ATOM 23 C4 A B 47 -58.098 32.870 -38.702 1.00 65.77 C
ATOM 24 P G B 48 -61.697 31.363 -43.345 1.00 77.71 P
ATOM 25 OP1 G B 48 -62.909 31.181 -44.149 1.00 79.44 O
ATOM 26 OP2 G B 48 -60.582 30.375 -43.492 1.00 76.79 O
ATOM 27 O5' G B 48 -61.106 32.825 -43.621 1.00 77.02 O
TER
Atoms:
OP1: (-56.146,22.452,-37.897)
OP2: (-54.506,24.304,-37.325)
C3': (-59.265,26.658,-37.597)
C1': (-59.146,27.841,-35.582)
C5': (-58.008,24.715,-36.242)
O6: (-54.440,31.443,-35.492)
O4': (-59.131,26.446,-35.297)
C8: (-56.567,27.865,-35.656)
C2: (-57.950,31.982,-35.367)
C6: (-55.635,31.192,-35.476)
C5: (-56.197,29.921,-35.543)
C4: (-57.556,29.796,-35.497)
P: (-55.808,23.618,-37.062)
C4': (-59.193,25.627,-36.473)
C2': (-59.863,27.896,-36.911)
O2': (-61.250,27.757,-36.659)
N1: (-56.584,32.203,-35.391)
N2: (-58.767,33.044,-35.269)
N3: (-58.494,30.771,-35.403)
N7: (-55.568,28.701,-35.638)
N9: (-57.809,28.459,-35.580)
O5': (-56.857,24.862,-37.002)
O3': (-60.089,26.267,-38.705)
OP2: (-54.506,24.304,-37.325)
C3': (-59.265,26.658,-37.597)
C1': (-59.146,27.841,-35.582)
C5': (-58.008,24.715,-36.242)
O6: (-54.440,31.443,-35.492)
O4': (-59.131,26.446,-35.297)
C8: (-56.567,27.865,-35.656)
C2: (-57.950,31.982,-35.367)
C6: (-55.635,31.192,-35.476)
C5: (-56.197,29.921,-35.543)
C4: (-57.556,29.796,-35.497)
P: (-55.808,23.618,-37.062)
C4': (-59.193,25.627,-36.473)
C2': (-59.863,27.896,-36.911)
O2': (-61.250,27.757,-36.659)
N1: (-56.584,32.203,-35.391)
N2: (-58.767,33.044,-35.269)
N3: (-58.494,30.771,-35.403)
N7: (-55.568,28.701,-35.638)
N9: (-57.809,28.459,-35.580)
O5': (-56.857,24.862,-37.002)
O3': (-60.089,26.267,-38.705)
OP1: (-60.619,26.153,-41.049)
OP2: (-58.253,26.823,-40.378)
C3': (-61.344,31.163,-40.773)
C1': (-60.418,31.828,-38.747)
C5': (-61.637,28.717,-39.935)
O4': (-60.949,30.499,-38.613)
C8: (-58.166,30.677,-38.882)
O2': (-62.082,33.284,-39.699)
C6: (-55.755,33.223,-38.734)
C5: (-56.837,32.326,-38.777)
C4: (-58.098,32.870,-38.702)
P: (-59.716,26.886,-40.136)
C4': (-61.845,30.195,-39.694)
C2': (-60.988,32.445,-40.020)
C2: (-57.295,34.916,-38.565)
N1: (-56.013,34.540,-38.627)
N3: (-58.399,34.166,-38.588)
N6: (-54.486,32.792,-38.790)
N7: (-56.875,30.933,-38.885)
N9: (-58.955,31.802,-38.771)
O5': (-60.217,28.416,-40.014)
O3': (-62.264,31.420,-41.838)
OP2: (-58.253,26.823,-40.378)
C3': (-61.344,31.163,-40.773)
C1': (-60.418,31.828,-38.747)
C5': (-61.637,28.717,-39.935)
O4': (-60.949,30.499,-38.613)
C8: (-58.166,30.677,-38.882)
O2': (-62.082,33.284,-39.699)
C6: (-55.755,33.223,-38.734)
C5: (-56.837,32.326,-38.777)
C4: (-58.098,32.870,-38.702)
P: (-59.716,26.886,-40.136)
C4': (-61.845,30.195,-39.694)
C2': (-60.988,32.445,-40.020)
C2: (-57.295,34.916,-38.565)
N1: (-56.013,34.540,-38.627)
N3: (-58.399,34.166,-38.588)
N6: (-54.486,32.792,-38.790)
N7: (-56.875,30.933,-38.885)
N9: (-58.955,31.802,-38.771)
O5': (-60.217,28.416,-40.014)
O3': (-62.264,31.420,-41.838)
Image (generated by PyMOL):