Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0434:0435
Extra
PDB:
ATOM 1 O3' U A 433 38.859 132.256 30.740 1.00 42.12 O
ATOM 2 P G A 434 37.947 132.113 32.050 1.00 43.91 P
ATOM 3 OP1 G A 434 36.632 132.727 31.751 1.00 43.70 O
ATOM 4 OP2 G A 434 38.726 132.603 33.209 1.00 43.15 O
ATOM 5 O5' G A 434 37.739 130.538 32.180 1.00 42.50 O
ATOM 6 C5' G A 434 37.013 129.809 31.170 1.00 41.16 C
ATOM 7 C4' G A 434 37.126 128.315 31.392 1.00 40.62 C
ATOM 8 O4' G A 434 38.525 127.923 31.391 1.00 41.52 O
ATOM 9 C3' G A 434 36.629 127.778 32.719 1.00 39.24 C
ATOM 10 O3' G A 434 35.228 127.636 32.777 1.00 37.92 O
ATOM 11 C2' G A 434 37.327 126.435 32.801 1.00 39.95 C
ATOM 12 O2' G A 434 36.716 125.432 32.020 1.00 37.78 O
ATOM 13 C1' G A 434 38.699 126.785 32.225 1.00 41.38 C
ATOM 14 N9 G A 434 39.658 127.107 33.279 1.00 42.31 N
ATOM 15 C8 G A 434 40.192 128.336 33.585 1.00 42.41 C
ATOM 16 N7 G A 434 41.021 128.298 34.593 1.00 43.72 N
ATOM 17 C5 G A 434 41.038 126.960 34.973 1.00 43.93 C
ATOM 18 C6 G A 434 41.755 126.300 36.013 1.00 44.25 C
ATOM 19 O6 G A 434 42.558 126.778 36.825 1.00 44.11 O
ATOM 20 N1 G A 434 41.459 124.943 36.053 1.00 43.20 N
ATOM 21 C2 G A 434 40.601 124.298 35.205 1.00 41.83 C
ATOM 22 N2 G A 434 40.458 122.986 35.399 1.00 41.97 N
ATOM 23 N3 G A 434 39.937 124.893 34.236 1.00 42.05 N
ATOM 24 C4 G A 434 40.200 126.215 34.176 1.00 42.56 C
ATOM 25 P A A 435 34.488 127.811 34.186 1.00 39.56 P
ATOM 26 OP1 A A 435 33.043 127.846 33.902 1.00 39.58 O
ATOM 27 OP2 A A 435 35.118 128.937 34.928 1.00 35.08 O
ATOM 28 O5' A A 435 34.823 126.459 34.957 1.00 37.99 O
TER
ATOM 1 O3' G B 434 35.228 127.636 32.777 1.00 37.92 O
ATOM 2 P A B 435 34.488 127.811 34.186 1.00 39.56 P
ATOM 3 OP1 A B 435 33.043 127.846 33.902 1.00 39.58 O
ATOM 4 OP2 A B 435 35.118 128.937 34.928 1.00 35.08 O
ATOM 5 O5' A B 435 34.823 126.459 34.957 1.00 37.99 O
ATOM 6 C5' A B 435 34.454 125.189 34.409 1.00 38.90 C
ATOM 7 C4' A B 435 35.017 124.064 35.247 1.00 39.54 C
ATOM 8 O4' A B 435 36.461 124.092 35.204 1.00 39.11 O
ATOM 9 C3' A B 435 34.678 124.088 36.726 1.00 40.30 C
ATOM 10 O3' A B 435 33.390 123.521 36.946 1.00 42.75 O
ATOM 11 C2' A B 435 35.798 123.243 37.310 1.00 39.52 C
ATOM 12 O2' A B 435 35.600 121.871 37.075 1.00 39.87 O
ATOM 13 C1' A B 435 36.983 123.689 36.454 1.00 40.13 C
ATOM 14 N9 A B 435 37.714 124.821 37.029 1.00 42.74 N
ATOM 15 C8 A B 435 37.603 126.149 36.696 1.00 42.99 C
ATOM 16 N7 A B 435 38.385 126.936 37.389 1.00 43.07 N
ATOM 17 C5 A B 435 39.064 126.071 38.234 1.00 42.61 C
ATOM 18 C6 A B 435 40.036 126.288 39.210 1.00 41.67 C
ATOM 19 N6 A B 435 40.528 127.489 39.504 1.00 41.38 N
ATOM 20 N1 A B 435 40.499 125.216 39.883 1.00 41.99 N
ATOM 21 C2 A B 435 40.012 124.010 39.581 1.00 41.18 C
ATOM 22 N3 A B 435 39.104 123.675 38.680 1.00 41.99 N
ATOM 23 C4 A B 435 38.660 124.766 38.028 1.00 43.13 C
ATOM 24 P G B 436 32.574 123.865 38.287 1.00 43.35 P
ATOM 25 OP1 G B 436 31.204 123.318 38.104 1.00 42.80 O
ATOM 26 OP2 G B 436 32.749 125.309 38.591 1.00 41.57 O
ATOM 27 O5' G B 436 33.302 122.998 39.413 1.00 43.08 O
TER
ATOM 2 P G A 434 37.947 132.113 32.050 1.00 43.91 P
ATOM 3 OP1 G A 434 36.632 132.727 31.751 1.00 43.70 O
ATOM 4 OP2 G A 434 38.726 132.603 33.209 1.00 43.15 O
ATOM 5 O5' G A 434 37.739 130.538 32.180 1.00 42.50 O
ATOM 6 C5' G A 434 37.013 129.809 31.170 1.00 41.16 C
ATOM 7 C4' G A 434 37.126 128.315 31.392 1.00 40.62 C
ATOM 8 O4' G A 434 38.525 127.923 31.391 1.00 41.52 O
ATOM 9 C3' G A 434 36.629 127.778 32.719 1.00 39.24 C
ATOM 10 O3' G A 434 35.228 127.636 32.777 1.00 37.92 O
ATOM 11 C2' G A 434 37.327 126.435 32.801 1.00 39.95 C
ATOM 12 O2' G A 434 36.716 125.432 32.020 1.00 37.78 O
ATOM 13 C1' G A 434 38.699 126.785 32.225 1.00 41.38 C
ATOM 14 N9 G A 434 39.658 127.107 33.279 1.00 42.31 N
ATOM 15 C8 G A 434 40.192 128.336 33.585 1.00 42.41 C
ATOM 16 N7 G A 434 41.021 128.298 34.593 1.00 43.72 N
ATOM 17 C5 G A 434 41.038 126.960 34.973 1.00 43.93 C
ATOM 18 C6 G A 434 41.755 126.300 36.013 1.00 44.25 C
ATOM 19 O6 G A 434 42.558 126.778 36.825 1.00 44.11 O
ATOM 20 N1 G A 434 41.459 124.943 36.053 1.00 43.20 N
ATOM 21 C2 G A 434 40.601 124.298 35.205 1.00 41.83 C
ATOM 22 N2 G A 434 40.458 122.986 35.399 1.00 41.97 N
ATOM 23 N3 G A 434 39.937 124.893 34.236 1.00 42.05 N
ATOM 24 C4 G A 434 40.200 126.215 34.176 1.00 42.56 C
ATOM 25 P A A 435 34.488 127.811 34.186 1.00 39.56 P
ATOM 26 OP1 A A 435 33.043 127.846 33.902 1.00 39.58 O
ATOM 27 OP2 A A 435 35.118 128.937 34.928 1.00 35.08 O
ATOM 28 O5' A A 435 34.823 126.459 34.957 1.00 37.99 O
TER
ATOM 1 O3' G B 434 35.228 127.636 32.777 1.00 37.92 O
ATOM 2 P A B 435 34.488 127.811 34.186 1.00 39.56 P
ATOM 3 OP1 A B 435 33.043 127.846 33.902 1.00 39.58 O
ATOM 4 OP2 A B 435 35.118 128.937 34.928 1.00 35.08 O
ATOM 5 O5' A B 435 34.823 126.459 34.957 1.00 37.99 O
ATOM 6 C5' A B 435 34.454 125.189 34.409 1.00 38.90 C
ATOM 7 C4' A B 435 35.017 124.064 35.247 1.00 39.54 C
ATOM 8 O4' A B 435 36.461 124.092 35.204 1.00 39.11 O
ATOM 9 C3' A B 435 34.678 124.088 36.726 1.00 40.30 C
ATOM 10 O3' A B 435 33.390 123.521 36.946 1.00 42.75 O
ATOM 11 C2' A B 435 35.798 123.243 37.310 1.00 39.52 C
ATOM 12 O2' A B 435 35.600 121.871 37.075 1.00 39.87 O
ATOM 13 C1' A B 435 36.983 123.689 36.454 1.00 40.13 C
ATOM 14 N9 A B 435 37.714 124.821 37.029 1.00 42.74 N
ATOM 15 C8 A B 435 37.603 126.149 36.696 1.00 42.99 C
ATOM 16 N7 A B 435 38.385 126.936 37.389 1.00 43.07 N
ATOM 17 C5 A B 435 39.064 126.071 38.234 1.00 42.61 C
ATOM 18 C6 A B 435 40.036 126.288 39.210 1.00 41.67 C
ATOM 19 N6 A B 435 40.528 127.489 39.504 1.00 41.38 N
ATOM 20 N1 A B 435 40.499 125.216 39.883 1.00 41.99 N
ATOM 21 C2 A B 435 40.012 124.010 39.581 1.00 41.18 C
ATOM 22 N3 A B 435 39.104 123.675 38.680 1.00 41.99 N
ATOM 23 C4 A B 435 38.660 124.766 38.028 1.00 43.13 C
ATOM 24 P G B 436 32.574 123.865 38.287 1.00 43.35 P
ATOM 25 OP1 G B 436 31.204 123.318 38.104 1.00 42.80 O
ATOM 26 OP2 G B 436 32.749 125.309 38.591 1.00 41.57 O
ATOM 27 O5' G B 436 33.302 122.998 39.413 1.00 43.08 O
TER
Atoms:
OP1: (36.632,132.727,31.751)
OP2: (38.726,132.603,33.209)
C3': (36.629,127.778,32.719)
C1': (38.699,126.785,32.225)
C5': (37.013,129.809,31.170)
O6: (42.558,126.778,36.825)
O4': (38.525,127.923,31.391)
C8: (40.192,128.336,33.585)
C2: (40.601,124.298,35.205)
C6: (41.755,126.300,36.013)
C5: (41.038,126.960,34.973)
C4: (40.200,126.215,34.176)
P: (37.947,132.113,32.050)
C4': (37.126,128.315,31.392)
C2': (37.327,126.435,32.801)
O2': (36.716,125.432,32.020)
N1: (41.459,124.943,36.053)
N2: (40.458,122.986,35.399)
N3: (39.937,124.893,34.236)
N7: (41.021,128.298,34.593)
N9: (39.658,127.107,33.279)
O5': (37.739,130.538,32.180)
O3': (35.228,127.636,32.777)
OP2: (38.726,132.603,33.209)
C3': (36.629,127.778,32.719)
C1': (38.699,126.785,32.225)
C5': (37.013,129.809,31.170)
O6: (42.558,126.778,36.825)
O4': (38.525,127.923,31.391)
C8: (40.192,128.336,33.585)
C2: (40.601,124.298,35.205)
C6: (41.755,126.300,36.013)
C5: (41.038,126.960,34.973)
C4: (40.200,126.215,34.176)
P: (37.947,132.113,32.050)
C4': (37.126,128.315,31.392)
C2': (37.327,126.435,32.801)
O2': (36.716,125.432,32.020)
N1: (41.459,124.943,36.053)
N2: (40.458,122.986,35.399)
N3: (39.937,124.893,34.236)
N7: (41.021,128.298,34.593)
N9: (39.658,127.107,33.279)
O5': (37.739,130.538,32.180)
O3': (35.228,127.636,32.777)
OP1: (33.043,127.846,33.902)
OP2: (35.118,128.937,34.928)
C3': (34.678,124.088,36.726)
C1': (36.983,123.689,36.454)
C5': (34.454,125.189,34.409)
O4': (36.461,124.092,35.204)
C8: (37.603,126.149,36.696)
O2': (35.600,121.871,37.075)
C6: (40.036,126.288,39.210)
C5: (39.064,126.071,38.234)
C4: (38.660,124.766,38.028)
P: (34.488,127.811,34.186)
C4': (35.017,124.064,35.247)
C2': (35.798,123.243,37.310)
C2: (40.012,124.010,39.581)
N1: (40.499,125.216,39.883)
N3: (39.104,123.675,38.680)
N6: (40.528,127.489,39.504)
N7: (38.385,126.936,37.389)
N9: (37.714,124.821,37.029)
O5': (34.823,126.459,34.957)
O3': (33.390,123.521,36.946)
OP2: (35.118,128.937,34.928)
C3': (34.678,124.088,36.726)
C1': (36.983,123.689,36.454)
C5': (34.454,125.189,34.409)
O4': (36.461,124.092,35.204)
C8: (37.603,126.149,36.696)
O2': (35.600,121.871,37.075)
C6: (40.036,126.288,39.210)
C5: (39.064,126.071,38.234)
C4: (38.660,124.766,38.028)
P: (34.488,127.811,34.186)
C4': (35.017,124.064,35.247)
C2': (35.798,123.243,37.310)
C2: (40.012,124.010,39.581)
N1: (40.499,125.216,39.883)
N3: (39.104,123.675,38.680)
N6: (40.528,127.489,39.504)
N7: (38.385,126.936,37.389)
N9: (37.714,124.821,37.029)
O5': (34.823,126.459,34.957)
O3': (33.390,123.521,36.946)
Image (generated by PyMOL):