ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUM:R75:R45

Extra

PDB:
ATOM 1 O3' U A 74 -6.872 -0.978 -5.225 1.00 32.98 O
ATOM 2 P A A 75 -6.959 -2.030 -4.018 1.00 33.48 P
ATOM 3 OP1 A A 75 -6.329 -1.383 -2.836 1.00 32.19 O
ATOM 4 OP2 A A 75 -6.454 -3.341 -4.490 1.00 30.48 O
ATOM 5 O5' A A 75 -8.536 -2.162 -3.791 1.00 30.45 O
ATOM 6 C5' A A 75 -9.259 -1.043 -3.283 1.00 29.69 C
ATOM 7 C4' A A 75 -10.278 -1.453 -2.240 1.00 29.31 C
ATOM 8 O4' A A 75 -11.232 -2.396 -2.800 1.00 28.46 O
ATOM 9 C3' A A 75 -9.690 -2.126 -1.009 1.00 28.51 C
ATOM 10 O3' A A 75 -10.429 -1.730 0.132 1.00 29.56 O
ATOM 11 C2' A A 75 -9.904 -3.594 -1.299 1.00 27.76 C
ATOM 12 O2' A A 75 -9.989 -4.341 -0.112 1.00 31.44 O
ATOM 13 C1' A A 75 -11.261 -3.546 -1.990 1.00 27.56 C
ATOM 14 N9 A A 75 -11.517 -4.715 -2.819 1.00 28.45 N
ATOM 15 C8 A A 75 -10.580 -5.560 -3.342 1.00 30.78 C
ATOM 16 N7 A A 75 -11.082 -6.548 -4.041 1.00 31.96 N
ATOM 17 C5 A A 75 -12.443 -6.332 -3.971 1.00 29.33 C
ATOM 18 C6 A A 75 -13.530 -7.034 -4.508 1.00 29.50 C
ATOM 19 N6 A A 75 -13.371 -8.134 -5.249 1.00 32.23 N
ATOM 20 N1 A A 75 -14.775 -6.570 -4.256 1.00 28.61 N
ATOM 21 C2 A A 75 -14.913 -5.468 -3.517 1.00 27.96 C
ATOM 22 N3 A A 75 -13.957 -4.724 -2.958 1.00 30.42 N
ATOM 23 C4 A A 75 -12.734 -5.212 -3.221 1.00 28.91 C
ATOM 24 P G A 76 -9.650 -1.276 1.440 1.00 31.11 P
ATOM 25 OP1 G A 76 -8.658 -2.323 1.774 1.00 30.50 O
ATOM 26 OP2 G A 76 -10.665 -0.858 2.432 1.00 34.93 O
ATOM 27 O5' G A 76 -8.863 0.033 0.969 1.00 30.16 O
TER

ATOM 1 O3' C B 44 -13.281 -12.209 -5.415 1.00 29.27 O
ATOM 2 P U B 45 -12.649 -11.537 -6.724 1.00 33.07 P
ATOM 3 OP1 U B 45 -11.912 -12.575 -7.486 1.00 31.46 O
ATOM 4 OP2 U B 45 -11.943 -10.297 -6.326 1.00 32.95 O
ATOM 5 O5' U B 45 -13.979 -11.162 -7.530 1.00 36.36 O
ATOM 6 C5' U B 45 -14.129 -9.892 -8.125 1.00 40.81 C
ATOM 7 C4' U B 45 -15.583 -9.446 -8.100 1.00 44.38 C
ATOM 8 O4' U B 45 -15.725 -8.241 -7.302 1.00 44.13 O
ATOM 9 C3' U B 45 -16.157 -9.056 -9.453 1.00 47.01 C
ATOM 10 O3' U B 45 -17.570 -9.161 -9.390 1.00 49.51 O
ATOM 11 C2' U B 45 -15.700 -7.604 -9.589 1.00 45.98 C
ATOM 12 O2' U B 45 -16.536 -6.860 -10.443 1.00 46.26 O
ATOM 13 C1' U B 45 -15.823 -7.102 -8.146 1.00 44.41 C
ATOM 14 N1 U B 45 -14.772 -6.125 -7.705 1.00 42.92 N
ATOM 15 C2 U B 45 -15.153 -4.934 -7.102 1.00 43.67 C
ATOM 16 O2 U B 45 -16.309 -4.607 -6.910 1.00 45.97 O
ATOM 17 N3 U B 45 -14.121 -4.110 -6.722 1.00 42.97 N
ATOM 18 C4 U B 45 -12.767 -4.353 -6.877 1.00 43.58 C
ATOM 19 O4 U B 45 -11.951 -3.520 -6.489 1.00 43.95 O
ATOM 20 C5 U B 45 -12.446 -5.612 -7.507 1.00 43.37 C
ATOM 21 C6 U B 45 -13.436 -6.430 -7.889 1.00 41.99 C
ATOM 22 P C B 46 -18.359 -10.149 -10.365 1.00 51.61 P
ATOM 23 OP1 C B 46 -17.596 -11.410 -10.487 1.00 49.06 O
ATOM 24 OP2 C B 46 -18.709 -9.368 -11.574 1.00 52.44 O
ATOM 25 O5' C B 46 -19.695 -10.434 -9.526 1.00 53.53 O
TER

Atoms:
OP1: (-6.329,-1.383,-2.836)
OP2: (-6.454,-3.341,-4.490)
C3': (-9.690,-2.126,-1.009)
C1': (-11.261,-3.546,-1.990)
C5': (-9.259,-1.043,-3.283)
O4': (-11.232,-2.396,-2.800)
C8: (-10.580,-5.560,-3.342)
O2': (-9.989,-4.341,-0.112)
C6: (-13.530,-7.034,-4.508)
C5: (-12.443,-6.332,-3.971)
C4: (-12.734,-5.212,-3.221)
P: (-6.959,-2.030,-4.018)
C4': (-10.278,-1.453,-2.240)
C2': (-9.904,-3.594,-1.299)
C2: (-14.913,-5.468,-3.517)
N1: (-14.775,-6.570,-4.256)
N3: (-13.957,-4.724,-2.958)
N6: (-13.371,-8.134,-5.249)
N7: (-11.082,-6.548,-4.041)
N9: (-11.517,-4.715,-2.819)
O5': (-8.536,-2.162,-3.791)
O3': (-10.429,-1.730,0.132)
C4: (-12.767,-4.353,-6.877)
N3: (-14.121,-4.110,-6.722)
OP1: (-11.912,-12.575,-7.486)
OP2: (-11.943,-10.297,-6.326)
C2: (-15.153,-4.934,-7.102)
C1': (-15.823,-7.102,-8.146)
C3': (-16.157,-9.056,-9.453)
O5': (-13.979,-11.162,-7.530)
O4': (-15.725,-8.241,-7.302)
C5': (-14.129,-9.892,-8.125)
P: (-12.649,-11.537,-6.724)
C4': (-15.583,-9.446,-8.100)
C2': (-15.700,-7.604,-9.589)
O2': (-16.536,-6.860,-10.443)
N1: (-14.772,-6.125,-7.705)
O4: (-11.951,-3.520,-6.489)
O2: (-16.309,-4.607,-6.910)
C6: (-13.436,-6.430,-7.889)
C5: (-12.446,-5.612,-7.507)
O3': (-17.570,-9.161,-9.390)
Image (generated by PyMOL):
PyMOL image
show in jmol