Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3B5S:B4:B5
Extra
PDB:
ATOM 1 O3' U A 3 26.880 17.273 68.136 1.00109.77 O
ATOM 2 P G A 4 27.781 18.119 67.098 1.00108.22 P
ATOM 3 OP1 G A 4 27.339 19.529 67.235 1.00110.54 O
ATOM 4 OP2 G A 4 27.761 17.460 65.757 1.00106.01 O
ATOM 5 O5' G A 4 29.271 18.003 67.647 1.00102.71 O
ATOM 6 C5' G A 4 29.607 18.538 68.911 1.00 97.19 C
ATOM 7 C4' G A 4 31.004 18.134 69.303 1.00 93.94 C
ATOM 8 O4' G A 4 31.081 16.687 69.359 1.00 94.80 O
ATOM 9 C3' G A 4 32.084 18.497 68.301 1.00 93.06 C
ATOM 10 O3' G A 4 32.497 19.845 68.425 1.00 94.41 O
ATOM 11 C2' G A 4 33.184 17.509 68.651 1.00 92.04 C
ATOM 12 O2' G A 4 33.915 17.871 69.801 1.00 90.62 O
ATOM 13 C1' G A 4 32.365 16.260 68.946 1.00 89.47 C
ATOM 14 N9 G A 4 32.235 15.432 67.751 1.00 85.85 N
ATOM 15 C8 G A 4 31.126 15.266 66.953 1.00 84.91 C
ATOM 16 N7 G A 4 31.346 14.485 65.928 1.00 83.94 N
ATOM 17 C5 G A 4 32.676 14.107 66.066 1.00 82.69 C
ATOM 18 C6 G A 4 33.490 13.268 65.253 1.00 81.17 C
ATOM 19 O6 G A 4 33.184 12.668 64.206 1.00 80.20 O
ATOM 20 N1 G A 4 34.786 13.160 65.769 1.00 78.44 N
ATOM 21 C2 G A 4 35.234 13.769 66.916 1.00 79.19 C
ATOM 22 N2 G A 4 36.497 13.534 67.260 1.00 76.69 N
ATOM 23 N3 G A 4 34.492 14.552 67.671 1.00 80.80 N
ATOM 24 C4 G A 4 33.232 14.677 67.193 1.00 82.95 C
ATOM 25 P A A 5 33.021 20.639 67.131 1.00 96.40 P
ATOM 26 OP1 A A 5 33.271 22.033 67.564 1.00 96.53 O
ATOM 27 OP2 A A 5 32.087 20.370 66.008 1.00 92.15 O
ATOM 28 O5' A A 5 34.452 20.001 66.843 1.00 89.86 O
TER
ATOM 1 O3' G B 4 32.497 19.845 68.425 1.00 94.41 O
ATOM 2 P A B 5 33.021 20.639 67.131 1.00 96.40 P
ATOM 3 OP1 A B 5 33.271 22.033 67.564 1.00 96.53 O
ATOM 4 OP2 A B 5 32.087 20.370 66.008 1.00 92.15 O
ATOM 5 O5' A B 5 34.452 20.001 66.843 1.00 89.86 O
ATOM 6 C5' A B 5 35.502 20.113 67.806 1.00 86.23 C
ATOM 7 C4' A B 5 36.658 19.220 67.439 1.00 83.82 C
ATOM 8 O4' A B 5 36.207 17.843 67.368 1.00 84.40 O
ATOM 9 C3' A B 5 37.277 19.480 66.083 1.00 83.92 C
ATOM 10 O3' A B 5 38.229 20.530 66.170 1.00 83.56 O
ATOM 11 C2' A B 5 37.929 18.136 65.769 1.00 84.12 C
ATOM 12 O2' A B 5 39.161 17.954 66.444 1.00 83.74 O
ATOM 13 C1' A B 5 36.890 17.163 66.324 1.00 81.67 C
ATOM 14 N9 A B 5 35.896 16.724 65.339 1.00 79.73 N
ATOM 15 C8 A B 5 34.593 17.161 65.261 1.00 78.06 C
ATOM 16 N7 A B 5 33.898 16.605 64.305 1.00 77.96 N
ATOM 17 C5 A B 5 34.799 15.741 63.703 1.00 76.69 C
ATOM 18 C6 A B 5 34.667 14.855 62.625 1.00 75.59 C
ATOM 19 N6 A B 5 33.525 14.691 61.940 1.00 70.81 N
ATOM 20 N1 A B 5 35.758 14.131 62.268 1.00 73.63 N
ATOM 21 C2 A B 5 36.898 14.295 62.959 1.00 75.61 C
ATOM 22 N3 A B 5 37.147 15.098 63.996 1.00 76.39 N
ATOM 23 C4 A B 5 36.041 15.803 64.325 1.00 77.80 C
ATOM 24 P G B 6 38.376 21.573 64.964 1.00 86.96 P
ATOM 25 OP1 G B 6 39.510 22.481 65.261 1.00 86.31 O
ATOM 26 OP2 G B 6 37.028 22.125 64.672 1.00 80.94 O
ATOM 27 O5' G B 6 38.844 20.674 63.738 1.00 84.33 O
TER
ATOM 2 P G A 4 27.781 18.119 67.098 1.00108.22 P
ATOM 3 OP1 G A 4 27.339 19.529 67.235 1.00110.54 O
ATOM 4 OP2 G A 4 27.761 17.460 65.757 1.00106.01 O
ATOM 5 O5' G A 4 29.271 18.003 67.647 1.00102.71 O
ATOM 6 C5' G A 4 29.607 18.538 68.911 1.00 97.19 C
ATOM 7 C4' G A 4 31.004 18.134 69.303 1.00 93.94 C
ATOM 8 O4' G A 4 31.081 16.687 69.359 1.00 94.80 O
ATOM 9 C3' G A 4 32.084 18.497 68.301 1.00 93.06 C
ATOM 10 O3' G A 4 32.497 19.845 68.425 1.00 94.41 O
ATOM 11 C2' G A 4 33.184 17.509 68.651 1.00 92.04 C
ATOM 12 O2' G A 4 33.915 17.871 69.801 1.00 90.62 O
ATOM 13 C1' G A 4 32.365 16.260 68.946 1.00 89.47 C
ATOM 14 N9 G A 4 32.235 15.432 67.751 1.00 85.85 N
ATOM 15 C8 G A 4 31.126 15.266 66.953 1.00 84.91 C
ATOM 16 N7 G A 4 31.346 14.485 65.928 1.00 83.94 N
ATOM 17 C5 G A 4 32.676 14.107 66.066 1.00 82.69 C
ATOM 18 C6 G A 4 33.490 13.268 65.253 1.00 81.17 C
ATOM 19 O6 G A 4 33.184 12.668 64.206 1.00 80.20 O
ATOM 20 N1 G A 4 34.786 13.160 65.769 1.00 78.44 N
ATOM 21 C2 G A 4 35.234 13.769 66.916 1.00 79.19 C
ATOM 22 N2 G A 4 36.497 13.534 67.260 1.00 76.69 N
ATOM 23 N3 G A 4 34.492 14.552 67.671 1.00 80.80 N
ATOM 24 C4 G A 4 33.232 14.677 67.193 1.00 82.95 C
ATOM 25 P A A 5 33.021 20.639 67.131 1.00 96.40 P
ATOM 26 OP1 A A 5 33.271 22.033 67.564 1.00 96.53 O
ATOM 27 OP2 A A 5 32.087 20.370 66.008 1.00 92.15 O
ATOM 28 O5' A A 5 34.452 20.001 66.843 1.00 89.86 O
TER
ATOM 1 O3' G B 4 32.497 19.845 68.425 1.00 94.41 O
ATOM 2 P A B 5 33.021 20.639 67.131 1.00 96.40 P
ATOM 3 OP1 A B 5 33.271 22.033 67.564 1.00 96.53 O
ATOM 4 OP2 A B 5 32.087 20.370 66.008 1.00 92.15 O
ATOM 5 O5' A B 5 34.452 20.001 66.843 1.00 89.86 O
ATOM 6 C5' A B 5 35.502 20.113 67.806 1.00 86.23 C
ATOM 7 C4' A B 5 36.658 19.220 67.439 1.00 83.82 C
ATOM 8 O4' A B 5 36.207 17.843 67.368 1.00 84.40 O
ATOM 9 C3' A B 5 37.277 19.480 66.083 1.00 83.92 C
ATOM 10 O3' A B 5 38.229 20.530 66.170 1.00 83.56 O
ATOM 11 C2' A B 5 37.929 18.136 65.769 1.00 84.12 C
ATOM 12 O2' A B 5 39.161 17.954 66.444 1.00 83.74 O
ATOM 13 C1' A B 5 36.890 17.163 66.324 1.00 81.67 C
ATOM 14 N9 A B 5 35.896 16.724 65.339 1.00 79.73 N
ATOM 15 C8 A B 5 34.593 17.161 65.261 1.00 78.06 C
ATOM 16 N7 A B 5 33.898 16.605 64.305 1.00 77.96 N
ATOM 17 C5 A B 5 34.799 15.741 63.703 1.00 76.69 C
ATOM 18 C6 A B 5 34.667 14.855 62.625 1.00 75.59 C
ATOM 19 N6 A B 5 33.525 14.691 61.940 1.00 70.81 N
ATOM 20 N1 A B 5 35.758 14.131 62.268 1.00 73.63 N
ATOM 21 C2 A B 5 36.898 14.295 62.959 1.00 75.61 C
ATOM 22 N3 A B 5 37.147 15.098 63.996 1.00 76.39 N
ATOM 23 C4 A B 5 36.041 15.803 64.325 1.00 77.80 C
ATOM 24 P G B 6 38.376 21.573 64.964 1.00 86.96 P
ATOM 25 OP1 G B 6 39.510 22.481 65.261 1.00 86.31 O
ATOM 26 OP2 G B 6 37.028 22.125 64.672 1.00 80.94 O
ATOM 27 O5' G B 6 38.844 20.674 63.738 1.00 84.33 O
TER
Atoms:
OP1: (27.339,19.529,67.235)
OP2: (27.761,17.460,65.757)
C3': (32.084,18.497,68.301)
C1': (32.365,16.260,68.946)
C5': (29.607,18.538,68.911)
O6: (33.184,12.668,64.206)
O4': (31.081,16.687,69.359)
C8: (31.126,15.266,66.953)
C2: (35.234,13.769,66.916)
C6: (33.490,13.268,65.253)
C5: (32.676,14.107,66.066)
C4: (33.232,14.677,67.193)
P: (27.781,18.119,67.098)
C4': (31.004,18.134,69.303)
C2': (33.184,17.509,68.651)
O2': (33.915,17.871,69.801)
N1: (34.786,13.160,65.769)
N2: (36.497,13.534,67.260)
N3: (34.492,14.552,67.671)
N7: (31.346,14.485,65.928)
N9: (32.235,15.432,67.751)
O5': (29.271,18.003,67.647)
O3': (32.497,19.845,68.425)
OP2: (27.761,17.460,65.757)
C3': (32.084,18.497,68.301)
C1': (32.365,16.260,68.946)
C5': (29.607,18.538,68.911)
O6: (33.184,12.668,64.206)
O4': (31.081,16.687,69.359)
C8: (31.126,15.266,66.953)
C2: (35.234,13.769,66.916)
C6: (33.490,13.268,65.253)
C5: (32.676,14.107,66.066)
C4: (33.232,14.677,67.193)
P: (27.781,18.119,67.098)
C4': (31.004,18.134,69.303)
C2': (33.184,17.509,68.651)
O2': (33.915,17.871,69.801)
N1: (34.786,13.160,65.769)
N2: (36.497,13.534,67.260)
N3: (34.492,14.552,67.671)
N7: (31.346,14.485,65.928)
N9: (32.235,15.432,67.751)
O5': (29.271,18.003,67.647)
O3': (32.497,19.845,68.425)
OP1: (33.271,22.033,67.564)
OP2: (32.087,20.370,66.008)
C3': (37.277,19.480,66.083)
C1': (36.890,17.163,66.324)
C5': (35.502,20.113,67.806)
O4': (36.207,17.843,67.368)
C8: (34.593,17.161,65.261)
O2': (39.161,17.954,66.444)
C6: (34.667,14.855,62.625)
C5: (34.799,15.741,63.703)
C4: (36.041,15.803,64.325)
P: (33.021,20.639,67.131)
C4': (36.658,19.220,67.439)
C2': (37.929,18.136,65.769)
C2: (36.898,14.295,62.959)
N1: (35.758,14.131,62.268)
N3: (37.147,15.098,63.996)
N6: (33.525,14.691,61.940)
N7: (33.898,16.605,64.305)
N9: (35.896,16.724,65.339)
O5': (34.452,20.001,66.843)
O3': (38.229,20.530,66.170)
OP2: (32.087,20.370,66.008)
C3': (37.277,19.480,66.083)
C1': (36.890,17.163,66.324)
C5': (35.502,20.113,67.806)
O4': (36.207,17.843,67.368)
C8: (34.593,17.161,65.261)
O2': (39.161,17.954,66.444)
C6: (34.667,14.855,62.625)
C5: (34.799,15.741,63.703)
C4: (36.041,15.803,64.325)
P: (33.021,20.639,67.131)
C4': (36.658,19.220,67.439)
C2': (37.929,18.136,65.769)
C2: (36.898,14.295,62.959)
N1: (35.758,14.131,62.268)
N3: (37.147,15.098,63.996)
N6: (33.525,14.691,61.940)
N7: (33.898,16.605,64.305)
N9: (35.896,16.724,65.339)
O5': (34.452,20.001,66.843)
O3': (38.229,20.530,66.170)
Image (generated by PyMOL):