Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11306:11307
Extra
PDB:
ATOM 1 O3' U A1305 89.004 -26.058 35.458 1.00 47.58 O
ATOM 2 P G A1306 88.061 -24.785 35.252 1.00 41.14 P
ATOM 3 OP1 G A1306 88.103 -24.429 33.790 1.00 41.35 O
ATOM 4 OP2 G A1306 88.464 -23.763 36.256 1.00 40.93 O
ATOM 5 O5' G A1306 86.641 -25.392 35.629 1.00 40.90 O
ATOM 6 C5' G A1306 86.112 -26.438 34.864 1.00 41.06 C
ATOM 7 C4' G A1306 84.945 -27.056 35.533 1.00 40.83 C
ATOM 8 O4' G A1306 85.309 -27.544 36.830 1.00 40.76 O
ATOM 9 C3' G A1306 83.760 -26.168 35.806 1.00 40.46 C
ATOM 10 O3' G A1306 82.998 -25.900 34.644 1.00 40.48 O
ATOM 11 C2' G A1306 83.008 -26.979 36.860 1.00 40.27 C
ATOM 12 O2' G A1306 82.303 -28.040 36.257 1.00 40.40 O
ATOM 13 C1' G A1306 84.161 -27.582 37.650 1.00 40.43 C
ATOM 14 N9 G A1306 84.446 -26.820 38.845 1.00 40.20 N
ATOM 15 C8 G A1306 85.486 -25.942 38.898 1.00 40.26 C
ATOM 16 N7 G A1306 85.554 -25.388 40.076 1.00 40.04 N
ATOM 17 C5 G A1306 84.512 -25.943 40.800 1.00 39.82 C
ATOM 18 C6 G A1306 84.146 -25.688 42.127 1.00 39.56 C
ATOM 19 O6 G A1306 84.702 -24.885 42.868 1.00 39.47 O
ATOM 20 N1 G A1306 83.045 -26.436 42.528 1.00 39.41 N
ATOM 21 C2 G A1306 82.388 -27.334 41.689 1.00 39.53 C
ATOM 22 N2 G A1306 81.343 -27.989 42.240 1.00 39.37 N
ATOM 23 N3 G A1306 82.750 -27.587 40.411 1.00 39.79 N
ATOM 24 C4 G A1306 83.805 -26.844 40.047 1.00 39.92 C
ATOM 25 P A A1307 82.226 -24.501 34.516 1.00 40.67 P
ATOM 26 OP1 A A1307 81.869 -24.332 33.108 1.00 40.84 O
ATOM 27 OP2 A A1307 83.063 -23.466 35.153 1.00 40.58 O
ATOM 28 O5' A A1307 80.922 -24.722 35.410 1.00 40.34 O
TER
ATOM 1 O3' G B1306 82.998 -25.900 34.644 1.00 40.48 O
ATOM 2 P A B1307 82.226 -24.501 34.516 1.00 40.67 P
ATOM 3 OP1 A B1307 81.869 -24.332 33.108 1.00 40.84 O
ATOM 4 OP2 A B1307 83.063 -23.466 35.153 1.00 40.58 O
ATOM 5 O5' A B1307 80.922 -24.722 35.410 1.00 40.34 O
ATOM 6 C5' A B1307 79.984 -25.738 35.122 1.00 40.37 C
ATOM 7 C4' A B1307 79.104 -26.023 36.308 1.00 40.08 C
ATOM 8 O4' A B1307 79.904 -26.465 37.425 1.00 40.08 O
ATOM 9 C3' A B1307 78.339 -24.848 36.869 1.00 39.72 C
ATOM 10 O3' A B1307 77.179 -24.560 36.132 1.00 39.64 O
ATOM 11 C2' A B1307 78.035 -25.330 38.258 1.00 39.52 C
ATOM 12 O2' A B1307 77.069 -26.362 38.190 1.00 39.53 O
ATOM 13 C1' A B1307 79.350 -25.975 38.620 1.00 39.75 C
ATOM 14 N9 A B1307 80.303 -25.027 39.229 1.00 39.69 N
ATOM 15 C8 A B1307 81.425 -24.446 38.662 1.00 39.88 C
ATOM 16 N7 A B1307 82.101 -23.679 39.499 1.00 39.78 N
ATOM 17 C5 A B1307 81.405 -23.784 40.698 1.00 39.51 C
ATOM 18 C6 A B1307 81.595 -23.231 41.956 1.00 39.32 C
ATOM 19 N6 A B1307 82.567 -22.419 42.264 1.00 39.35 N
ATOM 20 N1 A B1307 80.762 -23.525 42.950 1.00 39.09 N
ATOM 21 C2 A B1307 79.741 -24.336 42.676 1.00 39.06 C
ATOM 22 N3 A B1307 79.410 -24.929 41.519 1.00 39.22 N
ATOM 23 C4 A B1307 80.309 -24.613 40.552 1.00 39.45 C
ATOM 24 P C B1308 76.579 -23.093 36.137 1.00 40.09 P
ATOM 25 OP1 C B1308 75.478 -23.075 35.183 1.00 40.10 O
ATOM 26 OP2 C B1308 77.694 -22.167 35.931 1.00 40.18 O
ATOM 27 O5' C B1308 76.041 -22.947 37.618 1.00 39.76 O
TER
ATOM 2 P G A1306 88.061 -24.785 35.252 1.00 41.14 P
ATOM 3 OP1 G A1306 88.103 -24.429 33.790 1.00 41.35 O
ATOM 4 OP2 G A1306 88.464 -23.763 36.256 1.00 40.93 O
ATOM 5 O5' G A1306 86.641 -25.392 35.629 1.00 40.90 O
ATOM 6 C5' G A1306 86.112 -26.438 34.864 1.00 41.06 C
ATOM 7 C4' G A1306 84.945 -27.056 35.533 1.00 40.83 C
ATOM 8 O4' G A1306 85.309 -27.544 36.830 1.00 40.76 O
ATOM 9 C3' G A1306 83.760 -26.168 35.806 1.00 40.46 C
ATOM 10 O3' G A1306 82.998 -25.900 34.644 1.00 40.48 O
ATOM 11 C2' G A1306 83.008 -26.979 36.860 1.00 40.27 C
ATOM 12 O2' G A1306 82.303 -28.040 36.257 1.00 40.40 O
ATOM 13 C1' G A1306 84.161 -27.582 37.650 1.00 40.43 C
ATOM 14 N9 G A1306 84.446 -26.820 38.845 1.00 40.20 N
ATOM 15 C8 G A1306 85.486 -25.942 38.898 1.00 40.26 C
ATOM 16 N7 G A1306 85.554 -25.388 40.076 1.00 40.04 N
ATOM 17 C5 G A1306 84.512 -25.943 40.800 1.00 39.82 C
ATOM 18 C6 G A1306 84.146 -25.688 42.127 1.00 39.56 C
ATOM 19 O6 G A1306 84.702 -24.885 42.868 1.00 39.47 O
ATOM 20 N1 G A1306 83.045 -26.436 42.528 1.00 39.41 N
ATOM 21 C2 G A1306 82.388 -27.334 41.689 1.00 39.53 C
ATOM 22 N2 G A1306 81.343 -27.989 42.240 1.00 39.37 N
ATOM 23 N3 G A1306 82.750 -27.587 40.411 1.00 39.79 N
ATOM 24 C4 G A1306 83.805 -26.844 40.047 1.00 39.92 C
ATOM 25 P A A1307 82.226 -24.501 34.516 1.00 40.67 P
ATOM 26 OP1 A A1307 81.869 -24.332 33.108 1.00 40.84 O
ATOM 27 OP2 A A1307 83.063 -23.466 35.153 1.00 40.58 O
ATOM 28 O5' A A1307 80.922 -24.722 35.410 1.00 40.34 O
TER
ATOM 1 O3' G B1306 82.998 -25.900 34.644 1.00 40.48 O
ATOM 2 P A B1307 82.226 -24.501 34.516 1.00 40.67 P
ATOM 3 OP1 A B1307 81.869 -24.332 33.108 1.00 40.84 O
ATOM 4 OP2 A B1307 83.063 -23.466 35.153 1.00 40.58 O
ATOM 5 O5' A B1307 80.922 -24.722 35.410 1.00 40.34 O
ATOM 6 C5' A B1307 79.984 -25.738 35.122 1.00 40.37 C
ATOM 7 C4' A B1307 79.104 -26.023 36.308 1.00 40.08 C
ATOM 8 O4' A B1307 79.904 -26.465 37.425 1.00 40.08 O
ATOM 9 C3' A B1307 78.339 -24.848 36.869 1.00 39.72 C
ATOM 10 O3' A B1307 77.179 -24.560 36.132 1.00 39.64 O
ATOM 11 C2' A B1307 78.035 -25.330 38.258 1.00 39.52 C
ATOM 12 O2' A B1307 77.069 -26.362 38.190 1.00 39.53 O
ATOM 13 C1' A B1307 79.350 -25.975 38.620 1.00 39.75 C
ATOM 14 N9 A B1307 80.303 -25.027 39.229 1.00 39.69 N
ATOM 15 C8 A B1307 81.425 -24.446 38.662 1.00 39.88 C
ATOM 16 N7 A B1307 82.101 -23.679 39.499 1.00 39.78 N
ATOM 17 C5 A B1307 81.405 -23.784 40.698 1.00 39.51 C
ATOM 18 C6 A B1307 81.595 -23.231 41.956 1.00 39.32 C
ATOM 19 N6 A B1307 82.567 -22.419 42.264 1.00 39.35 N
ATOM 20 N1 A B1307 80.762 -23.525 42.950 1.00 39.09 N
ATOM 21 C2 A B1307 79.741 -24.336 42.676 1.00 39.06 C
ATOM 22 N3 A B1307 79.410 -24.929 41.519 1.00 39.22 N
ATOM 23 C4 A B1307 80.309 -24.613 40.552 1.00 39.45 C
ATOM 24 P C B1308 76.579 -23.093 36.137 1.00 40.09 P
ATOM 25 OP1 C B1308 75.478 -23.075 35.183 1.00 40.10 O
ATOM 26 OP2 C B1308 77.694 -22.167 35.931 1.00 40.18 O
ATOM 27 O5' C B1308 76.041 -22.947 37.618 1.00 39.76 O
TER
Atoms:
OP1: (88.103,-24.429,33.790)
OP2: (88.464,-23.763,36.256)
C3': (83.760,-26.168,35.806)
C1': (84.161,-27.582,37.650)
C5': (86.112,-26.438,34.864)
O6: (84.702,-24.885,42.868)
O4': (85.309,-27.544,36.830)
C8: (85.486,-25.942,38.898)
C2: (82.388,-27.334,41.689)
C6: (84.146,-25.688,42.127)
C5: (84.512,-25.943,40.800)
C4: (83.805,-26.844,40.047)
P: (88.061,-24.785,35.252)
C4': (84.945,-27.056,35.533)
C2': (83.008,-26.979,36.860)
O2': (82.303,-28.040,36.257)
N1: (83.045,-26.436,42.528)
N2: (81.343,-27.989,42.240)
N3: (82.750,-27.587,40.411)
N7: (85.554,-25.388,40.076)
N9: (84.446,-26.820,38.845)
O5': (86.641,-25.392,35.629)
O3': (82.998,-25.900,34.644)
OP2: (88.464,-23.763,36.256)
C3': (83.760,-26.168,35.806)
C1': (84.161,-27.582,37.650)
C5': (86.112,-26.438,34.864)
O6: (84.702,-24.885,42.868)
O4': (85.309,-27.544,36.830)
C8: (85.486,-25.942,38.898)
C2: (82.388,-27.334,41.689)
C6: (84.146,-25.688,42.127)
C5: (84.512,-25.943,40.800)
C4: (83.805,-26.844,40.047)
P: (88.061,-24.785,35.252)
C4': (84.945,-27.056,35.533)
C2': (83.008,-26.979,36.860)
O2': (82.303,-28.040,36.257)
N1: (83.045,-26.436,42.528)
N2: (81.343,-27.989,42.240)
N3: (82.750,-27.587,40.411)
N7: (85.554,-25.388,40.076)
N9: (84.446,-26.820,38.845)
O5': (86.641,-25.392,35.629)
O3': (82.998,-25.900,34.644)
OP1: (81.869,-24.332,33.108)
OP2: (83.063,-23.466,35.153)
C3': (78.339,-24.848,36.869)
C1': (79.350,-25.975,38.620)
C5': (79.984,-25.738,35.122)
O4': (79.904,-26.465,37.425)
C8: (81.425,-24.446,38.662)
O2': (77.069,-26.362,38.190)
C6: (81.595,-23.231,41.956)
C5: (81.405,-23.784,40.698)
C4: (80.309,-24.613,40.552)
P: (82.226,-24.501,34.516)
C4': (79.104,-26.023,36.308)
C2': (78.035,-25.330,38.258)
C2: (79.741,-24.336,42.676)
N1: (80.762,-23.525,42.950)
N3: (79.410,-24.929,41.519)
N6: (82.567,-22.419,42.264)
N7: (82.101,-23.679,39.499)
N9: (80.303,-25.027,39.229)
O5': (80.922,-24.722,35.410)
O3': (77.179,-24.560,36.132)
OP2: (83.063,-23.466,35.153)
C3': (78.339,-24.848,36.869)
C1': (79.350,-25.975,38.620)
C5': (79.984,-25.738,35.122)
O4': (79.904,-26.465,37.425)
C8: (81.425,-24.446,38.662)
O2': (77.069,-26.362,38.190)
C6: (81.595,-23.231,41.956)
C5: (81.405,-23.784,40.698)
C4: (80.309,-24.613,40.552)
P: (82.226,-24.501,34.516)
C4': (79.104,-26.023,36.308)
C2': (78.035,-25.330,38.258)
C2: (79.741,-24.336,42.676)
N1: (80.762,-23.525,42.950)
N3: (79.410,-24.929,41.519)
N6: (82.567,-22.419,42.264)
N7: (82.101,-23.679,39.499)
N9: (80.303,-25.027,39.229)
O5': (80.922,-24.722,35.410)
O3': (77.179,-24.560,36.132)
Image (generated by PyMOL):