Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RG5:A5:A6
Extra
PDB:
ATOM 1 O3' G A 4 -0.651 -3.416 29.453 1.00 79.40 O
ATOM 2 P G A 5 0.590 -2.852 28.603 1.00 80.09 P
ATOM 3 OP1 G A 5 1.814 -3.452 29.184 1.00 80.10 O
ATOM 4 OP2 G A 5 0.467 -1.374 28.472 1.00 79.33 O
ATOM 5 O5' G A 5 0.339 -3.505 27.161 1.00 79.65 O
ATOM 6 C5' G A 5 0.565 -4.887 26.962 1.00 78.91 C
ATOM 7 C4' G A 5 -0.053 -5.338 25.656 1.00 79.17 C
ATOM 8 O4' G A 5 -1.414 -4.859 25.518 1.00 78.65 O
ATOM 9 C3' G A 5 0.594 -4.819 24.384 1.00 79.45 C
ATOM 10 O3' G A 5 1.863 -5.420 24.165 1.00 80.64 O
ATOM 11 C2' G A 5 -0.478 -5.274 23.398 1.00 78.91 C
ATOM 12 O2' G A 5 -0.605 -6.673 23.241 1.00 78.81 O
ATOM 13 C1' G A 5 -1.709 -4.771 24.135 1.00 78.29 C
ATOM 14 N9 G A 5 -2.051 -3.402 23.745 1.00 76.73 N
ATOM 15 C8 G A 5 -1.922 -2.235 24.468 1.00 76.72 C
ATOM 16 N7 G A 5 -2.327 -1.170 23.825 1.00 75.51 N
ATOM 17 C5 G A 5 -2.746 -1.669 22.600 1.00 74.72 C
ATOM 18 C6 G A 5 -3.288 -0.998 21.485 1.00 74.37 C
ATOM 19 O6 G A 5 -3.499 0.214 21.370 1.00 73.81 O
ATOM 20 N1 G A 5 -3.580 -1.877 20.435 1.00 74.26 N
ATOM 21 C2 G A 5 -3.372 -3.244 20.463 1.00 74.75 C
ATOM 22 N2 G A 5 -3.714 -3.944 19.371 1.00 74.60 N
ATOM 23 N3 G A 5 -2.872 -3.886 21.509 1.00 74.92 N
ATOM 24 C4 G A 5 -2.582 -3.037 22.534 1.00 75.63 C
ATOM 25 P A A 6 3.076 -4.631 23.472 1.00 80.72 P
ATOM 26 OP1 A A 6 4.226 -5.557 23.484 1.00 81.82 O
ATOM 27 OP2 A A 6 3.214 -3.289 24.082 1.00 80.41 O
ATOM 28 O5' A A 6 2.604 -4.468 21.949 1.00 80.61 O
TER
ATOM 1 O3' G B 5 1.863 -5.420 24.165 1.00 80.64 O
ATOM 2 P A B 6 3.076 -4.631 23.472 1.00 80.72 P
ATOM 3 OP1 A B 6 4.226 -5.557 23.484 1.00 81.82 O
ATOM 4 OP2 A B 6 3.214 -3.289 24.082 1.00 80.41 O
ATOM 5 O5' A B 6 2.604 -4.468 21.949 1.00 80.61 O
ATOM 6 C5' A B 6 2.473 -5.614 21.103 1.00 79.73 C
ATOM 7 C4' A B 6 1.735 -5.247 19.828 1.00 79.82 C
ATOM 8 O4' A B 6 0.388 -4.806 20.158 1.00 79.30 O
ATOM 9 C3' A B 6 2.308 -4.055 19.063 1.00 80.02 C
ATOM 10 O3' A B 6 3.502 -4.321 18.284 1.00 80.22 O
ATOM 11 C2' A B 6 1.086 -3.602 18.253 1.00 79.62 C
ATOM 12 O2' A B 6 0.738 -4.385 17.126 1.00 79.85 O
ATOM 13 C1' A B 6 0.022 -3.693 19.343 1.00 78.93 C
ATOM 14 N9 A B 6 -0.005 -2.417 20.074 1.00 77.35 N
ATOM 15 C8 A B 6 0.439 -2.147 21.344 1.00 76.41 C
ATOM 16 N7 A B 6 0.295 -0.888 21.693 1.00 76.09 N
ATOM 17 C5 A B 6 -0.273 -0.284 20.579 1.00 75.36 C
ATOM 18 C6 A B 6 -0.681 1.042 20.291 1.00 74.32 C
ATOM 19 N6 A B 6 -0.577 2.058 21.151 1.00 73.06 N
ATOM 20 N1 A B 6 -1.205 1.299 19.071 1.00 73.95 N
ATOM 21 C2 A B 6 -1.320 0.295 18.194 1.00 74.21 C
ATOM 22 N3 A B 6 -0.977 -0.981 18.348 1.00 75.29 N
ATOM 23 C4 A B 6 -0.454 -1.213 19.569 1.00 75.99 C
ATOM 24 P U B 7 4.712 -3.246 18.243 1.00 79.89 P
ATOM 25 OP1 U B 7 5.918 -3.893 17.673 1.00 80.12 O
ATOM 26 OP2 U B 7 4.834 -2.569 19.558 1.00 78.86 O
ATOM 27 O5' U B 7 4.172 -2.185 17.167 1.00 77.91 O
TER
ATOM 2 P G A 5 0.590 -2.852 28.603 1.00 80.09 P
ATOM 3 OP1 G A 5 1.814 -3.452 29.184 1.00 80.10 O
ATOM 4 OP2 G A 5 0.467 -1.374 28.472 1.00 79.33 O
ATOM 5 O5' G A 5 0.339 -3.505 27.161 1.00 79.65 O
ATOM 6 C5' G A 5 0.565 -4.887 26.962 1.00 78.91 C
ATOM 7 C4' G A 5 -0.053 -5.338 25.656 1.00 79.17 C
ATOM 8 O4' G A 5 -1.414 -4.859 25.518 1.00 78.65 O
ATOM 9 C3' G A 5 0.594 -4.819 24.384 1.00 79.45 C
ATOM 10 O3' G A 5 1.863 -5.420 24.165 1.00 80.64 O
ATOM 11 C2' G A 5 -0.478 -5.274 23.398 1.00 78.91 C
ATOM 12 O2' G A 5 -0.605 -6.673 23.241 1.00 78.81 O
ATOM 13 C1' G A 5 -1.709 -4.771 24.135 1.00 78.29 C
ATOM 14 N9 G A 5 -2.051 -3.402 23.745 1.00 76.73 N
ATOM 15 C8 G A 5 -1.922 -2.235 24.468 1.00 76.72 C
ATOM 16 N7 G A 5 -2.327 -1.170 23.825 1.00 75.51 N
ATOM 17 C5 G A 5 -2.746 -1.669 22.600 1.00 74.72 C
ATOM 18 C6 G A 5 -3.288 -0.998 21.485 1.00 74.37 C
ATOM 19 O6 G A 5 -3.499 0.214 21.370 1.00 73.81 O
ATOM 20 N1 G A 5 -3.580 -1.877 20.435 1.00 74.26 N
ATOM 21 C2 G A 5 -3.372 -3.244 20.463 1.00 74.75 C
ATOM 22 N2 G A 5 -3.714 -3.944 19.371 1.00 74.60 N
ATOM 23 N3 G A 5 -2.872 -3.886 21.509 1.00 74.92 N
ATOM 24 C4 G A 5 -2.582 -3.037 22.534 1.00 75.63 C
ATOM 25 P A A 6 3.076 -4.631 23.472 1.00 80.72 P
ATOM 26 OP1 A A 6 4.226 -5.557 23.484 1.00 81.82 O
ATOM 27 OP2 A A 6 3.214 -3.289 24.082 1.00 80.41 O
ATOM 28 O5' A A 6 2.604 -4.468 21.949 1.00 80.61 O
TER
ATOM 1 O3' G B 5 1.863 -5.420 24.165 1.00 80.64 O
ATOM 2 P A B 6 3.076 -4.631 23.472 1.00 80.72 P
ATOM 3 OP1 A B 6 4.226 -5.557 23.484 1.00 81.82 O
ATOM 4 OP2 A B 6 3.214 -3.289 24.082 1.00 80.41 O
ATOM 5 O5' A B 6 2.604 -4.468 21.949 1.00 80.61 O
ATOM 6 C5' A B 6 2.473 -5.614 21.103 1.00 79.73 C
ATOM 7 C4' A B 6 1.735 -5.247 19.828 1.00 79.82 C
ATOM 8 O4' A B 6 0.388 -4.806 20.158 1.00 79.30 O
ATOM 9 C3' A B 6 2.308 -4.055 19.063 1.00 80.02 C
ATOM 10 O3' A B 6 3.502 -4.321 18.284 1.00 80.22 O
ATOM 11 C2' A B 6 1.086 -3.602 18.253 1.00 79.62 C
ATOM 12 O2' A B 6 0.738 -4.385 17.126 1.00 79.85 O
ATOM 13 C1' A B 6 0.022 -3.693 19.343 1.00 78.93 C
ATOM 14 N9 A B 6 -0.005 -2.417 20.074 1.00 77.35 N
ATOM 15 C8 A B 6 0.439 -2.147 21.344 1.00 76.41 C
ATOM 16 N7 A B 6 0.295 -0.888 21.693 1.00 76.09 N
ATOM 17 C5 A B 6 -0.273 -0.284 20.579 1.00 75.36 C
ATOM 18 C6 A B 6 -0.681 1.042 20.291 1.00 74.32 C
ATOM 19 N6 A B 6 -0.577 2.058 21.151 1.00 73.06 N
ATOM 20 N1 A B 6 -1.205 1.299 19.071 1.00 73.95 N
ATOM 21 C2 A B 6 -1.320 0.295 18.194 1.00 74.21 C
ATOM 22 N3 A B 6 -0.977 -0.981 18.348 1.00 75.29 N
ATOM 23 C4 A B 6 -0.454 -1.213 19.569 1.00 75.99 C
ATOM 24 P U B 7 4.712 -3.246 18.243 1.00 79.89 P
ATOM 25 OP1 U B 7 5.918 -3.893 17.673 1.00 80.12 O
ATOM 26 OP2 U B 7 4.834 -2.569 19.558 1.00 78.86 O
ATOM 27 O5' U B 7 4.172 -2.185 17.167 1.00 77.91 O
TER
Atoms:
OP1: (1.814,-3.452,29.184)
OP2: (0.467,-1.374,28.472)
C3': (0.594,-4.819,24.384)
C1': (-1.709,-4.771,24.135)
C5': (0.565,-4.887,26.962)
O6: (-3.499,0.214,21.370)
O4': (-1.414,-4.859,25.518)
C8: (-1.922,-2.235,24.468)
C2: (-3.372,-3.244,20.463)
C6: (-3.288,-0.998,21.485)
C5: (-2.746,-1.669,22.600)
C4: (-2.582,-3.037,22.534)
P: (0.590,-2.852,28.603)
C4': (-0.053,-5.338,25.656)
C2': (-0.478,-5.274,23.398)
O2': (-0.605,-6.673,23.241)
N1: (-3.580,-1.877,20.435)
N2: (-3.714,-3.944,19.371)
N3: (-2.872,-3.886,21.509)
N7: (-2.327,-1.170,23.825)
N9: (-2.051,-3.402,23.745)
O5': (0.339,-3.505,27.161)
O3': (1.863,-5.420,24.165)
OP2: (0.467,-1.374,28.472)
C3': (0.594,-4.819,24.384)
C1': (-1.709,-4.771,24.135)
C5': (0.565,-4.887,26.962)
O6: (-3.499,0.214,21.370)
O4': (-1.414,-4.859,25.518)
C8: (-1.922,-2.235,24.468)
C2: (-3.372,-3.244,20.463)
C6: (-3.288,-0.998,21.485)
C5: (-2.746,-1.669,22.600)
C4: (-2.582,-3.037,22.534)
P: (0.590,-2.852,28.603)
C4': (-0.053,-5.338,25.656)
C2': (-0.478,-5.274,23.398)
O2': (-0.605,-6.673,23.241)
N1: (-3.580,-1.877,20.435)
N2: (-3.714,-3.944,19.371)
N3: (-2.872,-3.886,21.509)
N7: (-2.327,-1.170,23.825)
N9: (-2.051,-3.402,23.745)
O5': (0.339,-3.505,27.161)
O3': (1.863,-5.420,24.165)
OP1: (4.226,-5.557,23.484)
OP2: (3.214,-3.289,24.082)
C3': (2.308,-4.055,19.063)
C1': (0.022,-3.693,19.343)
C5': (2.473,-5.614,21.103)
O4': (0.388,-4.806,20.158)
C8: (0.439,-2.147,21.344)
O2': (0.738,-4.385,17.126)
C6: (-0.681,1.042,20.291)
C5: (-0.273,-0.284,20.579)
C4: (-0.454,-1.213,19.569)
P: (3.076,-4.631,23.472)
C4': (1.735,-5.247,19.828)
C2': (1.086,-3.602,18.253)
C2: (-1.320,0.295,18.194)
N1: (-1.205,1.299,19.071)
N3: (-0.977,-0.981,18.348)
N6: (-0.577,2.058,21.151)
N7: (0.295,-0.888,21.693)
N9: (-0.005,-2.417,20.074)
O5': (2.604,-4.468,21.949)
O3': (3.502,-4.321,18.284)
OP2: (3.214,-3.289,24.082)
C3': (2.308,-4.055,19.063)
C1': (0.022,-3.693,19.343)
C5': (2.473,-5.614,21.103)
O4': (0.388,-4.806,20.158)
C8: (0.439,-2.147,21.344)
O2': (0.738,-4.385,17.126)
C6: (-0.681,1.042,20.291)
C5: (-0.273,-0.284,20.579)
C4: (-0.454,-1.213,19.569)
P: (3.076,-4.631,23.472)
C4': (1.735,-5.247,19.828)
C2': (1.086,-3.602,18.253)
C2: (-1.320,0.295,18.194)
N1: (-1.205,1.299,19.071)
N3: (-0.977,-0.981,18.348)
N6: (-0.577,2.058,21.151)
N7: (0.295,-0.888,21.693)
N9: (-0.005,-2.417,20.074)
O5': (2.604,-4.468,21.949)
O3': (3.502,-4.321,18.284)
Image (generated by PyMOL):