Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD3:A1:A2
Extra
PDB:
ATOM 1 O3' G A 0 27.975 -42.248 22.198 1.00 66.27 O
ATOM 2 P G A 1 27.331 -40.827 21.822 1.00 80.29 P
ATOM 3 OP1 G A 1 28.393 -39.808 22.000 1.00 82.32 O
ATOM 4 OP2 G A 1 26.077 -40.695 22.603 1.00 79.71 O
ATOM 5 O5' G A 1 26.992 -40.990 20.275 1.00 49.24 O
ATOM 6 C5' G A 1 28.026 -41.119 19.311 1.00 50.33 C
ATOM 7 C4' G A 1 27.472 -41.180 17.910 1.00 54.22 C
ATOM 8 O4' G A 1 26.698 -42.397 17.738 1.00 56.16 O
ATOM 9 C3' G A 1 26.499 -40.076 17.530 1.00 55.74 C
ATOM 10 O3' G A 1 27.139 -38.866 17.175 1.00 59.59 O
ATOM 11 C2' G A 1 25.717 -40.713 16.392 1.00 53.57 C
ATOM 12 O2' G A 1 26.488 -40.728 15.199 1.00 52.65 O
ATOM 13 C1' G A 1 25.589 -42.145 16.898 1.00 53.65 C
ATOM 14 N9 G A 1 24.356 -42.333 17.683 1.00 50.49 N
ATOM 15 C8 G A 1 24.239 -42.449 19.047 1.00 45.83 C
ATOM 16 N7 G A 1 23.002 -42.599 19.438 1.00 45.30 N
ATOM 17 C5 G A 1 22.260 -42.577 18.264 1.00 49.64 C
ATOM 18 C6 G A 1 20.861 -42.693 18.053 1.00 51.02 C
ATOM 19 O6 G A 1 19.961 -42.846 18.890 1.00 49.89 O
ATOM 20 N1 G A 1 20.544 -42.614 16.698 1.00 52.92 N
ATOM 21 C2 G A 1 21.449 -42.445 15.677 1.00 52.76 C
ATOM 22 N2 G A 1 20.944 -42.393 14.434 1.00 52.90 N
ATOM 23 N3 G A 1 22.755 -42.335 15.862 1.00 51.90 N
ATOM 24 C4 G A 1 23.084 -42.411 17.171 1.00 51.59 C
ATOM 25 P A A 2 26.380 -37.465 17.379 1.00 65.30 P
ATOM 26 OP1 A A 2 27.313 -36.400 16.940 1.00 68.59 O
ATOM 27 OP2 A A 2 25.871 -37.440 18.775 1.00 62.28 O
ATOM 28 O5' A A 2 25.162 -37.570 16.361 1.00 52.71 O
TER
ATOM 1 O3' G B 1 27.139 -38.866 17.175 1.00 59.59 O
ATOM 2 P A B 2 26.380 -37.465 17.379 1.00 65.30 P
ATOM 3 OP1 A B 2 27.313 -36.400 16.940 1.00 68.59 O
ATOM 4 OP2 A B 2 25.871 -37.440 18.775 1.00 62.28 O
ATOM 5 O5' A B 2 25.162 -37.570 16.361 1.00 52.71 O
ATOM 6 C5' A B 2 25.367 -37.402 14.967 1.00 53.06 C
ATOM 7 C4' A B 2 24.095 -37.617 14.188 1.00 51.36 C
ATOM 8 O4' A B 2 23.513 -38.902 14.539 1.00 49.69 O
ATOM 9 C3' A B 2 22.964 -36.637 14.457 1.00 50.75 C
ATOM 10 O3' A B 2 23.130 -35.381 13.820 1.00 54.02 O
ATOM 11 C2' A B 2 21.757 -37.419 13.970 1.00 47.41 C
ATOM 12 O2' A B 2 21.735 -37.474 12.551 1.00 45.61 O
ATOM 13 C1' A B 2 22.101 -38.809 14.495 1.00 48.13 C
ATOM 14 N9 A B 2 21.573 -39.017 15.855 1.00 44.25 N
ATOM 15 C8 A B 2 22.244 -38.980 17.051 1.00 44.93 C
ATOM 16 N7 A B 2 21.469 -39.200 18.089 1.00 45.50 N
ATOM 17 C5 A B 2 20.205 -39.382 17.538 1.00 43.94 C
ATOM 18 C6 A B 2 18.945 -39.650 18.106 1.00 42.72 C
ATOM 19 N6 A B 2 18.730 -39.788 19.416 1.00 44.08 N
ATOM 20 N1 A B 2 17.891 -39.772 17.268 1.00 42.12 N
ATOM 21 C2 A B 2 18.096 -39.635 15.953 1.00 41.13 C
ATOM 22 N3 A B 2 19.228 -39.382 15.301 1.00 42.89 N
ATOM 23 C4 A B 2 20.257 -39.269 16.161 1.00 44.03 C
ATOM 24 P G B 3 22.486 -34.060 14.478 1.00 71.66 P
ATOM 25 OP1 G B 3 22.900 -32.908 13.639 1.00 73.46 O
ATOM 26 OP2 G B 3 22.855 -34.064 15.915 1.00 70.21 O
ATOM 27 O5' G B 3 20.918 -34.309 14.321 1.00 38.91 O
TER
ATOM 2 P G A 1 27.331 -40.827 21.822 1.00 80.29 P
ATOM 3 OP1 G A 1 28.393 -39.808 22.000 1.00 82.32 O
ATOM 4 OP2 G A 1 26.077 -40.695 22.603 1.00 79.71 O
ATOM 5 O5' G A 1 26.992 -40.990 20.275 1.00 49.24 O
ATOM 6 C5' G A 1 28.026 -41.119 19.311 1.00 50.33 C
ATOM 7 C4' G A 1 27.472 -41.180 17.910 1.00 54.22 C
ATOM 8 O4' G A 1 26.698 -42.397 17.738 1.00 56.16 O
ATOM 9 C3' G A 1 26.499 -40.076 17.530 1.00 55.74 C
ATOM 10 O3' G A 1 27.139 -38.866 17.175 1.00 59.59 O
ATOM 11 C2' G A 1 25.717 -40.713 16.392 1.00 53.57 C
ATOM 12 O2' G A 1 26.488 -40.728 15.199 1.00 52.65 O
ATOM 13 C1' G A 1 25.589 -42.145 16.898 1.00 53.65 C
ATOM 14 N9 G A 1 24.356 -42.333 17.683 1.00 50.49 N
ATOM 15 C8 G A 1 24.239 -42.449 19.047 1.00 45.83 C
ATOM 16 N7 G A 1 23.002 -42.599 19.438 1.00 45.30 N
ATOM 17 C5 G A 1 22.260 -42.577 18.264 1.00 49.64 C
ATOM 18 C6 G A 1 20.861 -42.693 18.053 1.00 51.02 C
ATOM 19 O6 G A 1 19.961 -42.846 18.890 1.00 49.89 O
ATOM 20 N1 G A 1 20.544 -42.614 16.698 1.00 52.92 N
ATOM 21 C2 G A 1 21.449 -42.445 15.677 1.00 52.76 C
ATOM 22 N2 G A 1 20.944 -42.393 14.434 1.00 52.90 N
ATOM 23 N3 G A 1 22.755 -42.335 15.862 1.00 51.90 N
ATOM 24 C4 G A 1 23.084 -42.411 17.171 1.00 51.59 C
ATOM 25 P A A 2 26.380 -37.465 17.379 1.00 65.30 P
ATOM 26 OP1 A A 2 27.313 -36.400 16.940 1.00 68.59 O
ATOM 27 OP2 A A 2 25.871 -37.440 18.775 1.00 62.28 O
ATOM 28 O5' A A 2 25.162 -37.570 16.361 1.00 52.71 O
TER
ATOM 1 O3' G B 1 27.139 -38.866 17.175 1.00 59.59 O
ATOM 2 P A B 2 26.380 -37.465 17.379 1.00 65.30 P
ATOM 3 OP1 A B 2 27.313 -36.400 16.940 1.00 68.59 O
ATOM 4 OP2 A B 2 25.871 -37.440 18.775 1.00 62.28 O
ATOM 5 O5' A B 2 25.162 -37.570 16.361 1.00 52.71 O
ATOM 6 C5' A B 2 25.367 -37.402 14.967 1.00 53.06 C
ATOM 7 C4' A B 2 24.095 -37.617 14.188 1.00 51.36 C
ATOM 8 O4' A B 2 23.513 -38.902 14.539 1.00 49.69 O
ATOM 9 C3' A B 2 22.964 -36.637 14.457 1.00 50.75 C
ATOM 10 O3' A B 2 23.130 -35.381 13.820 1.00 54.02 O
ATOM 11 C2' A B 2 21.757 -37.419 13.970 1.00 47.41 C
ATOM 12 O2' A B 2 21.735 -37.474 12.551 1.00 45.61 O
ATOM 13 C1' A B 2 22.101 -38.809 14.495 1.00 48.13 C
ATOM 14 N9 A B 2 21.573 -39.017 15.855 1.00 44.25 N
ATOM 15 C8 A B 2 22.244 -38.980 17.051 1.00 44.93 C
ATOM 16 N7 A B 2 21.469 -39.200 18.089 1.00 45.50 N
ATOM 17 C5 A B 2 20.205 -39.382 17.538 1.00 43.94 C
ATOM 18 C6 A B 2 18.945 -39.650 18.106 1.00 42.72 C
ATOM 19 N6 A B 2 18.730 -39.788 19.416 1.00 44.08 N
ATOM 20 N1 A B 2 17.891 -39.772 17.268 1.00 42.12 N
ATOM 21 C2 A B 2 18.096 -39.635 15.953 1.00 41.13 C
ATOM 22 N3 A B 2 19.228 -39.382 15.301 1.00 42.89 N
ATOM 23 C4 A B 2 20.257 -39.269 16.161 1.00 44.03 C
ATOM 24 P G B 3 22.486 -34.060 14.478 1.00 71.66 P
ATOM 25 OP1 G B 3 22.900 -32.908 13.639 1.00 73.46 O
ATOM 26 OP2 G B 3 22.855 -34.064 15.915 1.00 70.21 O
ATOM 27 O5' G B 3 20.918 -34.309 14.321 1.00 38.91 O
TER
Atoms:
OP1: (28.393,-39.808,22.000)
OP2: (26.077,-40.695,22.603)
C3': (26.499,-40.076,17.530)
C1': (25.589,-42.145,16.898)
C5': (28.026,-41.119,19.311)
O6: (19.961,-42.846,18.890)
O4': (26.698,-42.397,17.738)
C8: (24.239,-42.449,19.047)
C2: (21.449,-42.445,15.677)
C6: (20.861,-42.693,18.053)
C5: (22.260,-42.577,18.264)
C4: (23.084,-42.411,17.171)
P: (27.331,-40.827,21.822)
C4': (27.472,-41.180,17.910)
C2': (25.717,-40.713,16.392)
O2': (26.488,-40.728,15.199)
N1: (20.544,-42.614,16.698)
N2: (20.944,-42.393,14.434)
N3: (22.755,-42.335,15.862)
N7: (23.002,-42.599,19.438)
N9: (24.356,-42.333,17.683)
O5': (26.992,-40.990,20.275)
O3': (27.139,-38.866,17.175)
OP2: (26.077,-40.695,22.603)
C3': (26.499,-40.076,17.530)
C1': (25.589,-42.145,16.898)
C5': (28.026,-41.119,19.311)
O6: (19.961,-42.846,18.890)
O4': (26.698,-42.397,17.738)
C8: (24.239,-42.449,19.047)
C2: (21.449,-42.445,15.677)
C6: (20.861,-42.693,18.053)
C5: (22.260,-42.577,18.264)
C4: (23.084,-42.411,17.171)
P: (27.331,-40.827,21.822)
C4': (27.472,-41.180,17.910)
C2': (25.717,-40.713,16.392)
O2': (26.488,-40.728,15.199)
N1: (20.544,-42.614,16.698)
N2: (20.944,-42.393,14.434)
N3: (22.755,-42.335,15.862)
N7: (23.002,-42.599,19.438)
N9: (24.356,-42.333,17.683)
O5': (26.992,-40.990,20.275)
O3': (27.139,-38.866,17.175)
OP1: (27.313,-36.400,16.940)
OP2: (25.871,-37.440,18.775)
C3': (22.964,-36.637,14.457)
C1': (22.101,-38.809,14.495)
C5': (25.367,-37.402,14.967)
O4': (23.513,-38.902,14.539)
C8: (22.244,-38.980,17.051)
O2': (21.735,-37.474,12.551)
C6: (18.945,-39.650,18.106)
C5: (20.205,-39.382,17.538)
C4: (20.257,-39.269,16.161)
P: (26.380,-37.465,17.379)
C4': (24.095,-37.617,14.188)
C2': (21.757,-37.419,13.970)
C2: (18.096,-39.635,15.953)
N1: (17.891,-39.772,17.268)
N3: (19.228,-39.382,15.301)
N6: (18.730,-39.788,19.416)
N7: (21.469,-39.200,18.089)
N9: (21.573,-39.017,15.855)
O5': (25.162,-37.570,16.361)
O3': (23.130,-35.381,13.820)
OP2: (25.871,-37.440,18.775)
C3': (22.964,-36.637,14.457)
C1': (22.101,-38.809,14.495)
C5': (25.367,-37.402,14.967)
O4': (23.513,-38.902,14.539)
C8: (22.244,-38.980,17.051)
O2': (21.735,-37.474,12.551)
C6: (18.945,-39.650,18.106)
C5: (20.205,-39.382,17.538)
C4: (20.257,-39.269,16.161)
P: (26.380,-37.465,17.379)
C4': (24.095,-37.617,14.188)
C2': (21.757,-37.419,13.970)
C2: (18.096,-39.635,15.953)
N1: (17.891,-39.772,17.268)
N3: (19.228,-39.382,15.301)
N6: (18.730,-39.788,19.416)
N7: (21.469,-39.200,18.089)
N9: (21.573,-39.017,15.855)
O5': (25.162,-37.570,16.361)
O3': (23.130,-35.381,13.820)
Image (generated by PyMOL):