ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MXH:R75:R45

Extra

PDB:
ATOM 1 O3' U A 74 -6.760 -0.829 -5.051 1.00 49.35 O
ATOM 2 P A A 75 -6.770 -1.879 -3.841 1.00 49.22 P
ATOM 3 OP1 A A 75 -6.128 -1.205 -2.690 1.00 50.08 O
ATOM 4 OP2 A A 75 -6.242 -3.175 -4.333 1.00 46.99 O
ATOM 5 O5' A A 75 -8.321 -2.088 -3.536 1.00 47.14 O
ATOM 6 C5' A A 75 -9.072 -1.041 -2.954 1.00 47.05 C
ATOM 7 C4' A A 75 -10.159 -1.611 -2.072 1.00 46.31 C
ATOM 8 O4' A A 75 -10.925 -2.580 -2.828 1.00 47.00 O
ATOM 9 C3' A A 75 -9.652 -2.342 -0.835 1.00 44.80 C
ATOM 10 O3' A A 75 -10.341 -1.852 0.297 1.00 46.15 O
ATOM 11 C2' A A 75 -9.992 -3.804 -1.104 1.00 42.90 C
ATOM 12 O2' A A 75 -10.343 -4.493 0.072 1.00 45.08 O
ATOM 13 C1' A A 75 -11.223 -3.654 -1.977 1.00 43.99 C
ATOM 14 N9 A A 75 -11.552 -4.816 -2.794 1.00 43.85 N
ATOM 15 C8 A A 75 -10.703 -5.754 -3.311 1.00 44.31 C
ATOM 16 N7 A A 75 -11.303 -6.690 -4.008 1.00 44.37 N
ATOM 17 C5 A A 75 -12.636 -6.344 -3.939 1.00 43.64 C
ATOM 18 C6 A A 75 -13.797 -6.933 -4.470 1.00 45.13 C
ATOM 19 N6 A A 75 -13.781 -8.047 -5.209 1.00 46.80 N
ATOM 20 N1 A A 75 -14.978 -6.329 -4.211 1.00 45.84 N
ATOM 21 C2 A A 75 -14.990 -5.214 -3.469 1.00 44.89 C
ATOM 22 N3 A A 75 -13.965 -4.571 -2.915 1.00 42.79 N
ATOM 23 C4 A A 75 -12.808 -5.192 -3.193 1.00 43.37 C
ATOM 24 P G A 76 -9.530 -1.307 1.557 1.00 47.53 P
ATOM 25 OP1 G A 76 -8.474 -2.286 1.884 1.00 43.71 O
ATOM 26 OP2 G A 76 -10.527 -0.916 2.582 1.00 49.08 O
ATOM 27 O5' G A 76 -8.827 0.017 0.995 1.00 47.09 O
TER

ATOM 1 O3' C B 44 -13.102 -12.114 -5.225 1.00 48.25 O
ATOM 2 P U B 45 -12.806 -11.305 -6.572 1.00 49.47 P
ATOM 3 OP1 U B 45 -12.333 -12.253 -7.602 1.00 52.05 O
ATOM 4 OP2 U B 45 -11.988 -10.125 -6.219 1.00 47.45 O
ATOM 5 O5' U B 45 -14.273 -10.803 -6.962 1.00 55.47 O
ATOM 6 C5' U B 45 -14.605 -10.524 -8.312 1.00 57.90 C
ATOM 7 C4' U B 45 -15.789 -9.575 -8.399 1.00 58.35 C
ATOM 8 O4' U B 45 -15.564 -8.406 -7.567 1.00 56.30 O
ATOM 9 C3' U B 45 -16.068 -9.046 -9.802 1.00 60.56 C
ATOM 10 O3' U B 45 -17.470 -8.943 -10.010 1.00 62.35 O
ATOM 11 C2' U B 45 -15.415 -7.666 -9.777 1.00 58.62 C
ATOM 12 O2' U B 45 -16.016 -6.773 -10.693 1.00 62.67 O
ATOM 13 C1' U B 45 -15.723 -7.240 -8.347 1.00 55.68 C
ATOM 14 N1 U B 45 -14.847 -6.154 -7.791 1.00 52.10 N
ATOM 15 C2 U B 45 -15.444 -5.081 -7.152 1.00 50.85 C
ATOM 16 O2 U B 45 -16.648 -4.953 -7.014 1.00 53.39 O
ATOM 17 N3 U B 45 -14.573 -4.141 -6.671 1.00 49.71 N
ATOM 18 C4 U B 45 -13.198 -4.155 -6.756 1.00 49.27 C
ATOM 19 O4 U B 45 -12.567 -3.223 -6.271 1.00 52.77 O
ATOM 20 C5 U B 45 -12.637 -5.304 -7.426 1.00 48.53 C
ATOM 21 C6 U B 45 -13.466 -6.241 -7.909 1.00 51.19 C
ATOM 22 P C B 46 -18.378 -10.215 -10.340 1.00 66.47 P
ATOM 23 OP1 C B 46 -17.720 -11.447 -9.847 1.00 65.45 O
ATOM 24 OP2 C B 46 -18.777 -10.113 -11.762 1.00 70.09 O
ATOM 25 O5' C B 46 -19.664 -9.931 -9.433 1.00 68.54 O
TER

Atoms:
OP1: (-6.128,-1.205,-2.690)
OP2: (-6.242,-3.175,-4.333)
C3': (-9.652,-2.342,-0.835)
C1': (-11.223,-3.654,-1.977)
C5': (-9.072,-1.041,-2.954)
O4': (-10.925,-2.580,-2.828)
C8: (-10.703,-5.754,-3.311)
O2': (-10.343,-4.493,0.072)
C6: (-13.797,-6.933,-4.470)
C5: (-12.636,-6.344,-3.939)
C4: (-12.808,-5.192,-3.193)
P: (-6.770,-1.879,-3.841)
C4': (-10.159,-1.611,-2.072)
C2': (-9.992,-3.804,-1.104)
C2: (-14.990,-5.214,-3.469)
N1: (-14.978,-6.329,-4.211)
N3: (-13.965,-4.571,-2.915)
N6: (-13.781,-8.047,-5.209)
N7: (-11.303,-6.690,-4.008)
N9: (-11.552,-4.816,-2.794)
O5': (-8.321,-2.088,-3.536)
O3': (-10.341,-1.852,0.297)
C4: (-13.198,-4.155,-6.756)
N3: (-14.573,-4.141,-6.671)
OP1: (-12.333,-12.253,-7.602)
OP2: (-11.988,-10.125,-6.219)
C2: (-15.444,-5.081,-7.152)
C1': (-15.723,-7.240,-8.347)
C3': (-16.068,-9.046,-9.802)
O5': (-14.273,-10.803,-6.962)
O4': (-15.564,-8.406,-7.567)
C5': (-14.605,-10.524,-8.312)
P: (-12.806,-11.305,-6.572)
C4': (-15.789,-9.575,-8.399)
C2': (-15.415,-7.666,-9.777)
O2': (-16.016,-6.773,-10.693)
N1: (-14.847,-6.154,-7.791)
O4: (-12.567,-3.223,-6.271)
O2: (-16.648,-4.953,-7.014)
C6: (-13.466,-6.241,-7.909)
C5: (-12.637,-5.304,-7.426)
O3': (-17.470,-8.943,-10.010)
Image (generated by PyMOL):
PyMOL image
show in jmol