ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A119:A120

Extra

PDB:
ATOM 1 O3' G A 118 27.644 17.965 90.012 1.00112.31 O
ATOM 2 P G A 119 26.683 17.227 91.083 1.00115.06 P
ATOM 3 OP1 G A 119 26.448 18.188 92.189 1.00116.50 O
ATOM 4 OP2 G A 119 27.278 15.897 91.392 1.00109.33 O
ATOM 5 O5' G A 119 25.309 16.995 90.295 1.00115.66 O
ATOM 6 C5' G A 119 24.490 18.104 89.908 1.00115.60 C
ATOM 7 C4' G A 119 23.376 17.668 88.971 1.00119.29 C
ATOM 8 O4' G A 119 23.948 17.115 87.749 1.00116.81 O
ATOM 9 C3' G A 119 22.414 16.577 89.435 1.00125.37 C
ATOM 10 O3' G A 119 21.372 17.004 90.301 1.00127.03 O
ATOM 11 C2' G A 119 21.841 16.058 88.119 1.00123.69 C
ATOM 12 O2' G A 119 20.752 16.816 87.617 1.00115.18 O
ATOM 13 C1' G A 119 23.053 16.154 87.194 1.00121.09 C
ATOM 14 N9 G A 119 23.704 14.844 87.100 1.00118.26 N
ATOM 15 C8 G A 119 24.700 14.325 87.901 1.00114.65 C
ATOM 16 N7 G A 119 25.013 13.090 87.599 1.00109.32 N
ATOM 17 C5 G A 119 24.189 12.778 86.524 1.00111.31 C
ATOM 18 C6 G A 119 24.066 11.579 85.770 1.00112.00 C
ATOM 19 O6 G A 119 24.686 10.516 85.901 1.00113.37 O
ATOM 20 N1 G A 119 23.099 11.698 84.775 1.00107.36 N
ATOM 21 C2 G A 119 22.343 12.821 84.534 1.00108.56 C
ATOM 22 N2 G A 119 21.449 12.745 83.538 1.00108.34 N
ATOM 23 N3 G A 119 22.451 13.940 85.221 1.00111.37 N
ATOM 24 C4 G A 119 23.383 13.852 86.195 1.00113.42 C
ATOM 25 P A A 120 20.573 15.906 91.167 1.00127.78 P
ATOM 26 OP1 A A 120 19.572 16.666 91.958 1.00132.86 O
ATOM 27 OP2 A A 120 21.581 15.061 91.870 1.00117.82 O
ATOM 28 O5' A A 120 19.828 14.995 90.076 1.00126.13 O
TER

ATOM 1 O3' G B 119 21.372 17.004 90.301 1.00127.03 O
ATOM 2 P A B 120 20.573 15.906 91.167 1.00127.78 P
ATOM 3 OP1 A B 120 19.572 16.666 91.958 1.00132.86 O
ATOM 4 OP2 A B 120 21.581 15.061 91.870 1.00117.82 O
ATOM 5 O5' A B 120 19.828 14.995 90.076 1.00126.13 O
ATOM 6 C5' A B 120 18.671 15.472 89.369 1.00125.89 C
ATOM 7 C4' A B 120 17.994 14.353 88.579 1.00126.25 C
ATOM 8 O4' A B 120 18.685 14.111 87.314 1.00124.12 O
ATOM 9 C3' A B 120 17.901 12.963 89.202 1.00125.71 C
ATOM 10 O3' A B 120 16.962 12.769 90.250 1.00128.74 O
ATOM 11 C2' A B 120 17.657 12.088 87.978 1.00121.05 C
ATOM 12 O2' A B 120 16.328 12.113 87.494 1.00111.05 O
ATOM 13 C1' A B 120 18.619 12.726 86.982 1.00120.12 C
ATOM 14 N9 A B 120 19.914 12.109 87.288 1.00119.43 N
ATOM 15 C8 A B 120 20.944 12.619 88.043 1.00120.83 C
ATOM 16 N7 A B 120 21.919 11.770 88.250 1.00119.72 N
ATOM 17 C5 A B 120 21.521 10.633 87.562 1.00119.20 C
ATOM 18 C6 A B 120 22.116 9.369 87.402 1.00121.33 C
ATOM 19 N6 A B 120 23.276 9.023 87.962 1.00120.68 N
ATOM 20 N1 A B 120 21.465 8.458 86.644 1.00120.77 N
ATOM 21 C2 A B 120 20.293 8.801 86.099 1.00120.13 C
ATOM 22 N3 A B 120 19.627 9.953 86.187 1.00120.73 N
ATOM 23 C4 A B 120 20.303 10.837 86.941 1.00118.49 C
ATOM 24 P A B 121 17.388 11.858 91.513 1.00126.89 P
ATOM 25 OP1 A B 121 16.608 12.275 92.702 1.00122.45 O
ATOM 26 OP2 A B 121 18.873 11.855 91.578 1.00123.05 O
ATOM 27 O5' A B 121 16.957 10.379 91.107 1.00121.08 O
TER

Atoms:
OP1: (26.448,18.188,92.189)
OP2: (27.278,15.897,91.392)
C3': (22.414,16.577,89.435)
C1': (23.053,16.154,87.194)
C5': (24.490,18.104,89.908)
O6: (24.686,10.516,85.901)
O4': (23.948,17.115,87.749)
C8: (24.700,14.325,87.901)
C2: (22.343,12.821,84.534)
C6: (24.066,11.579,85.770)
C5: (24.189,12.778,86.524)
C4: (23.383,13.852,86.195)
P: (26.683,17.227,91.083)
C4': (23.376,17.668,88.971)
C2': (21.841,16.058,88.119)
O2': (20.752,16.816,87.617)
N1: (23.099,11.698,84.775)
N2: (21.449,12.745,83.538)
N3: (22.451,13.940,85.221)
N7: (25.013,13.090,87.599)
N9: (23.704,14.844,87.100)
O5': (25.309,16.995,90.295)
O3': (21.372,17.004,90.301)
OP1: (19.572,16.666,91.958)
OP2: (21.581,15.061,91.870)
C3': (17.901,12.963,89.202)
C1': (18.619,12.726,86.982)
C5': (18.671,15.472,89.369)
O4': (18.685,14.111,87.314)
C8: (20.944,12.619,88.043)
O2': (16.328,12.113,87.494)
C6: (22.116,9.369,87.402)
C5: (21.521,10.633,87.562)
C4: (20.303,10.837,86.941)
P: (20.573,15.906,91.167)
C4': (17.994,14.353,88.579)
C2': (17.657,12.088,87.978)
C2: (20.293,8.801,86.099)
N1: (21.465,8.458,86.644)
N3: (19.627,9.953,86.187)
N6: (23.276,9.023,87.962)
N7: (21.919,11.770,88.250)
N9: (19.914,12.109,87.288)
O5': (19.828,14.995,90.076)
O3': (16.962,12.769,90.250)
Image (generated by PyMOL):
PyMOL image
show in jmol