ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XJR:A10:A11

Extra

PDB:
ATOM 1 O3' C A 9 49.930 28.573 47.867 1.00 73.54 O
ATOM 2 P G A 10 48.341 28.657 47.977 1.00 75.21 P
ATOM 3 OP1 G A 10 47.745 27.311 47.994 1.00 76.44 O
ATOM 4 OP2 G A 10 47.755 29.717 47.112 1.00 74.71 O
ATOM 5 O5' G A 10 48.350 29.179 49.484 1.00 78.02 O
ATOM 6 C5' G A 10 47.214 29.082 50.345 1.00 78.18 C
ATOM 7 C4' G A 10 47.568 29.767 51.654 1.00 78.08 C
ATOM 8 O4' G A 10 48.929 29.459 52.091 1.00 78.83 O
ATOM 9 C3' G A 10 47.601 31.282 51.580 1.00 76.25 C
ATOM 10 O3' G A 10 46.285 31.781 51.485 1.00 73.27 O
ATOM 11 C2' G A 10 48.298 31.556 52.911 1.00 76.66 C
ATOM 12 O2' G A 10 47.462 31.209 53.994 1.00 77.78 O
ATOM 13 C1' G A 10 49.437 30.542 52.869 1.00 77.63 C
ATOM 14 N9 G A 10 50.704 30.974 52.271 1.00 77.64 N
ATOM 15 C8 G A 10 51.138 30.635 51.013 1.00 77.70 C
ATOM 16 N7 G A 10 52.304 31.143 50.710 1.00 78.03 N
ATOM 17 C5 G A 10 52.677 31.865 51.825 1.00 77.63 C
ATOM 18 C6 G A 10 53.852 32.625 52.069 1.00 78.59 C
ATOM 19 O6 G A 10 54.822 32.815 51.329 1.00 78.37 O
ATOM 20 N1 G A 10 53.859 33.216 53.329 1.00 78.54 N
ATOM 21 C2 G A 10 52.843 33.070 54.234 1.00 77.58 C
ATOM 22 N2 G A 10 53.026 33.703 55.390 1.00 77.39 N
ATOM 23 N3 G A 10 51.741 32.357 54.019 1.00 77.84 N
ATOM 24 C4 G A 10 51.708 31.772 52.799 1.00 77.34 C
ATOM 25 P A A 11 46.062 33.231 50.878 1.00 74.19 P
ATOM 26 OP1 A A 11 44.640 33.728 50.964 1.00 73.85 O
ATOM 27 OP2 A A 11 46.748 33.247 49.569 1.00 73.80 O
ATOM 28 O5' A A 11 46.936 34.089 51.899 1.00 73.67 O
TER

ATOM 1 O3' G B 10 46.285 31.781 51.485 1.00 73.27 O
ATOM 2 P A B 11 46.062 33.231 50.878 1.00 74.19 P
ATOM 3 OP1 A B 11 44.640 33.728 50.964 1.00 73.85 O
ATOM 4 OP2 A B 11 46.748 33.247 49.569 1.00 73.80 O
ATOM 5 O5' A B 11 46.936 34.089 51.899 1.00 73.67 O
ATOM 6 C5' A B 11 46.322 34.788 52.963 1.00 71.93 C
ATOM 7 C4' A B 11 47.347 35.648 53.686 1.00 72.12 C
ATOM 8 O4' A B 11 48.599 34.950 53.956 1.00 71.37 O
ATOM 9 C3' A B 11 47.782 36.861 52.897 1.00 70.71 C
ATOM 10 O3' A B 11 46.757 37.801 52.991 1.00 71.51 O
ATOM 11 C2' A B 11 49.049 37.237 53.662 1.00 70.51 C
ATOM 12 O2' A B 11 48.805 37.864 54.907 1.00 69.52 O
ATOM 13 C1' A B 11 49.678 35.855 53.853 1.00 70.94 C
ATOM 14 N9 A B 11 50.461 35.529 52.673 1.00 70.94 N
ATOM 15 C8 A B 11 49.981 34.906 51.553 1.00 71.70 C
ATOM 16 N7 A B 11 50.858 34.758 50.592 1.00 72.34 N
ATOM 17 C5 A B 11 52.017 35.333 51.109 1.00 72.79 C
ATOM 18 C6 A B 11 53.322 35.496 50.569 1.00 71.45 C
ATOM 19 N6 A B 11 53.687 35.074 49.350 1.00 70.00 N
ATOM 20 N1 A B 11 54.236 36.110 51.353 1.00 71.27 N
ATOM 21 C2 A B 11 53.882 36.540 52.575 1.00 71.48 C
ATOM 22 N3 A B 11 52.695 36.451 53.184 1.00 71.96 N
ATOM 23 C4 A B 11 51.788 35.823 52.397 1.00 72.37 C
ATOM 24 P G B 12 45.907 38.217 51.710 1.00 71.30 P
ATOM 25 OP1 G B 12 44.638 38.780 52.192 1.00 71.55 O
ATOM 26 OP2 G B 12 45.943 37.111 50.750 1.00 69.97 O
ATOM 27 O5' G B 12 46.745 39.430 51.105 1.00 73.44 O
TER

Atoms:
OP1: (47.745,27.311,47.994)
OP2: (47.755,29.717,47.112)
C3': (47.601,31.282,51.580)
C1': (49.437,30.542,52.869)
C5': (47.214,29.082,50.345)
O6: (54.822,32.815,51.329)
O4': (48.929,29.459,52.091)
C8: (51.138,30.635,51.013)
C2: (52.843,33.070,54.234)
C6: (53.852,32.625,52.069)
C5: (52.677,31.865,51.825)
C4: (51.708,31.772,52.799)
P: (48.341,28.657,47.977)
C4': (47.568,29.767,51.654)
C2': (48.298,31.556,52.911)
O2': (47.462,31.209,53.994)
N1: (53.859,33.216,53.329)
N2: (53.026,33.703,55.390)
N3: (51.741,32.357,54.019)
N7: (52.304,31.143,50.710)
N9: (50.704,30.974,52.271)
O5': (48.350,29.179,49.484)
O3': (46.285,31.781,51.485)
OP1: (44.640,33.728,50.964)
OP2: (46.748,33.247,49.569)
C3': (47.782,36.861,52.897)
C1': (49.678,35.855,53.853)
C5': (46.322,34.788,52.963)
O4': (48.599,34.950,53.956)
C8: (49.981,34.906,51.553)
O2': (48.805,37.864,54.907)
C6: (53.322,35.496,50.569)
C5: (52.017,35.333,51.109)
C4: (51.788,35.823,52.397)
P: (46.062,33.231,50.878)
C4': (47.347,35.648,53.686)
C2': (49.049,37.237,53.662)
C2: (53.882,36.540,52.575)
N1: (54.236,36.110,51.353)
N3: (52.695,36.451,53.184)
N6: (53.687,35.074,49.350)
N7: (50.858,34.758,50.592)
N9: (50.461,35.529,52.673)
O5': (46.936,34.089,51.899)
O3': (46.757,37.801,52.991)
Image (generated by PyMOL):
PyMOL image
show in jmol