Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11007:11010
Extra
PDB:
ATOM 1 O3' A A1006 63.578 -56.383 30.276 1.00 48.03 O
ATOM 2 P G A1007 64.658 -55.936 31.354 1.00 69.45 P
ATOM 3 OP1 G A1007 64.031 -54.942 32.229 1.00 68.89 O
ATOM 4 OP2 G A1007 65.864 -55.562 30.616 1.00 69.60 O
ATOM 5 O5' G A1007 64.912 -57.261 32.164 1.00 69.72 O
ATOM 6 C5' G A1007 64.077 -57.622 33.243 1.00 69.54 C
ATOM 7 C4' G A1007 64.488 -58.944 33.822 1.00 69.89 C
ATOM 8 O4' G A1007 64.298 -59.979 32.822 1.00 70.43 O
ATOM 9 C3' G A1007 65.942 -59.020 34.233 1.00 69.98 C
ATOM 10 O3' G A1007 66.084 -59.907 35.341 1.00 70.08 O
ATOM 11 C2' G A1007 66.609 -59.606 33.001 1.00 70.49 C
ATOM 12 O2' G A1007 67.843 -60.252 33.241 1.00 70.80 O
ATOM 13 C1' G A1007 65.538 -60.561 32.476 1.00 70.82 C
ATOM 14 N9 G A1007 65.566 -60.702 31.018 1.00 71.18 N
ATOM 15 C8 G A1007 65.191 -59.681 30.188 1.00 70.98 C
ATOM 16 N7 G A1007 65.312 -59.953 28.924 1.00 71.37 N
ATOM 17 C5 G A1007 65.806 -61.250 28.897 1.00 71.88 C
ATOM 18 C6 G A1007 66.118 -62.072 27.766 1.00 72.46 C
ATOM 19 O6 G A1007 66.037 -61.817 26.546 1.00 72.66 O
ATOM 20 N1 G A1007 66.563 -63.321 28.180 1.00 72.86 N
ATOM 21 C2 G A1007 66.692 -63.727 29.486 1.00 72.72 C
ATOM 22 N2 G A1007 67.152 -64.980 29.631 1.00 73.20 N
ATOM 23 N3 G A1007 66.410 -62.974 30.549 1.00 72.18 N
ATOM 24 C4 G A1007 65.972 -61.741 30.189 1.00 71.77 C
ATOM 25 P A A1008 66.941 -59.452 36.616 1.00 98.95 P
ATOM 26 OP1 A A1008 66.041 -58.676 37.506 1.00 98.43 O
ATOM 27 OP2 A A1008 68.179 -58.811 36.100 1.00 98.96 O
ATOM 28 O5' A A1008 67.297 -60.831 37.285 1.00 99.34 O
TER
ATOM 1 O3' A B1009 64.998 -63.875 39.856 1.00 83.75 O
ATOM 2 P G B1010 64.752 -65.180 38.962 1.00 99.85 P
ATOM 3 OP1 G B1010 63.294 -65.387 38.902 1.00 99.80 O
ATOM 4 OP2 G B1010 65.590 -66.256 39.515 1.00100.25 O
ATOM 5 O5' G B1010 65.289 -64.734 37.529 1.00 99.99 O
ATOM 6 C5' G B1010 64.581 -63.754 36.777 1.00 99.70 C
ATOM 7 C4' G B1010 64.951 -63.782 35.318 1.00100.02 C
ATOM 8 O4' G B1010 66.357 -63.509 35.170 1.00100.09 O
ATOM 9 C3' G B1010 64.769 -65.104 34.608 1.00100.63 C
ATOM 10 O3' G B1010 63.440 -65.341 34.227 1.00100.66 O
ATOM 11 C2' G B1010 65.723 -64.977 33.438 1.00100.91 C
ATOM 12 O2' G B1010 65.184 -64.112 32.452 1.00100.74 O
ATOM 13 C1' G B1010 66.887 -64.267 34.109 1.00100.63 C
ATOM 14 N9 G B1010 67.864 -65.213 34.672 1.00100.98 N
ATOM 15 C8 G B1010 68.017 -65.579 35.990 1.00100.88 C
ATOM 16 N7 G B1010 68.994 -66.425 36.177 1.00101.28 N
ATOM 17 C5 G B1010 69.514 -66.629 34.900 1.00101.67 C
ATOM 18 C6 G B1010 70.589 -67.448 34.450 1.00102.20 C
ATOM 19 O6 G B1010 71.331 -68.190 35.117 1.00102.46 O
ATOM 20 N1 G B1010 70.761 -67.336 33.067 1.00102.46 N
ATOM 21 C2 G B1010 70.004 -66.543 32.225 1.00102.23 C
ATOM 22 N2 G B1010 70.317 -66.551 30.916 1.00102.55 N
ATOM 23 N3 G B1010 69.002 -65.784 32.635 1.00101.74 N
ATOM 24 C4 G B1010 68.826 -65.879 33.967 1.00101.48 C
ATOM 25 P U B1011 62.815 -66.789 34.455 1.00 90.93 P
ATOM 26 OP1 U B1011 61.375 -66.657 34.281 1.00 90.79 O
ATOM 27 OP2 U B1011 63.331 -67.287 35.746 1.00 90.91 O
ATOM 28 O5' U B1011 63.434 -67.643 33.252 1.00 91.56 O
TER
ATOM 2 P G A1007 64.658 -55.936 31.354 1.00 69.45 P
ATOM 3 OP1 G A1007 64.031 -54.942 32.229 1.00 68.89 O
ATOM 4 OP2 G A1007 65.864 -55.562 30.616 1.00 69.60 O
ATOM 5 O5' G A1007 64.912 -57.261 32.164 1.00 69.72 O
ATOM 6 C5' G A1007 64.077 -57.622 33.243 1.00 69.54 C
ATOM 7 C4' G A1007 64.488 -58.944 33.822 1.00 69.89 C
ATOM 8 O4' G A1007 64.298 -59.979 32.822 1.00 70.43 O
ATOM 9 C3' G A1007 65.942 -59.020 34.233 1.00 69.98 C
ATOM 10 O3' G A1007 66.084 -59.907 35.341 1.00 70.08 O
ATOM 11 C2' G A1007 66.609 -59.606 33.001 1.00 70.49 C
ATOM 12 O2' G A1007 67.843 -60.252 33.241 1.00 70.80 O
ATOM 13 C1' G A1007 65.538 -60.561 32.476 1.00 70.82 C
ATOM 14 N9 G A1007 65.566 -60.702 31.018 1.00 71.18 N
ATOM 15 C8 G A1007 65.191 -59.681 30.188 1.00 70.98 C
ATOM 16 N7 G A1007 65.312 -59.953 28.924 1.00 71.37 N
ATOM 17 C5 G A1007 65.806 -61.250 28.897 1.00 71.88 C
ATOM 18 C6 G A1007 66.118 -62.072 27.766 1.00 72.46 C
ATOM 19 O6 G A1007 66.037 -61.817 26.546 1.00 72.66 O
ATOM 20 N1 G A1007 66.563 -63.321 28.180 1.00 72.86 N
ATOM 21 C2 G A1007 66.692 -63.727 29.486 1.00 72.72 C
ATOM 22 N2 G A1007 67.152 -64.980 29.631 1.00 73.20 N
ATOM 23 N3 G A1007 66.410 -62.974 30.549 1.00 72.18 N
ATOM 24 C4 G A1007 65.972 -61.741 30.189 1.00 71.77 C
ATOM 25 P A A1008 66.941 -59.452 36.616 1.00 98.95 P
ATOM 26 OP1 A A1008 66.041 -58.676 37.506 1.00 98.43 O
ATOM 27 OP2 A A1008 68.179 -58.811 36.100 1.00 98.96 O
ATOM 28 O5' A A1008 67.297 -60.831 37.285 1.00 99.34 O
TER
ATOM 1 O3' A B1009 64.998 -63.875 39.856 1.00 83.75 O
ATOM 2 P G B1010 64.752 -65.180 38.962 1.00 99.85 P
ATOM 3 OP1 G B1010 63.294 -65.387 38.902 1.00 99.80 O
ATOM 4 OP2 G B1010 65.590 -66.256 39.515 1.00100.25 O
ATOM 5 O5' G B1010 65.289 -64.734 37.529 1.00 99.99 O
ATOM 6 C5' G B1010 64.581 -63.754 36.777 1.00 99.70 C
ATOM 7 C4' G B1010 64.951 -63.782 35.318 1.00100.02 C
ATOM 8 O4' G B1010 66.357 -63.509 35.170 1.00100.09 O
ATOM 9 C3' G B1010 64.769 -65.104 34.608 1.00100.63 C
ATOM 10 O3' G B1010 63.440 -65.341 34.227 1.00100.66 O
ATOM 11 C2' G B1010 65.723 -64.977 33.438 1.00100.91 C
ATOM 12 O2' G B1010 65.184 -64.112 32.452 1.00100.74 O
ATOM 13 C1' G B1010 66.887 -64.267 34.109 1.00100.63 C
ATOM 14 N9 G B1010 67.864 -65.213 34.672 1.00100.98 N
ATOM 15 C8 G B1010 68.017 -65.579 35.990 1.00100.88 C
ATOM 16 N7 G B1010 68.994 -66.425 36.177 1.00101.28 N
ATOM 17 C5 G B1010 69.514 -66.629 34.900 1.00101.67 C
ATOM 18 C6 G B1010 70.589 -67.448 34.450 1.00102.20 C
ATOM 19 O6 G B1010 71.331 -68.190 35.117 1.00102.46 O
ATOM 20 N1 G B1010 70.761 -67.336 33.067 1.00102.46 N
ATOM 21 C2 G B1010 70.004 -66.543 32.225 1.00102.23 C
ATOM 22 N2 G B1010 70.317 -66.551 30.916 1.00102.55 N
ATOM 23 N3 G B1010 69.002 -65.784 32.635 1.00101.74 N
ATOM 24 C4 G B1010 68.826 -65.879 33.967 1.00101.48 C
ATOM 25 P U B1011 62.815 -66.789 34.455 1.00 90.93 P
ATOM 26 OP1 U B1011 61.375 -66.657 34.281 1.00 90.79 O
ATOM 27 OP2 U B1011 63.331 -67.287 35.746 1.00 90.91 O
ATOM 28 O5' U B1011 63.434 -67.643 33.252 1.00 91.56 O
TER
Atoms:
OP1: (64.031,-54.942,32.229)
OP2: (65.864,-55.562,30.616)
C3': (65.942,-59.020,34.233)
C1': (65.538,-60.561,32.476)
C5': (64.077,-57.622,33.243)
O6: (66.037,-61.817,26.546)
O4': (64.298,-59.979,32.822)
C8: (65.191,-59.681,30.188)
C2: (66.692,-63.727,29.486)
C6: (66.118,-62.072,27.766)
C5: (65.806,-61.250,28.897)
C4: (65.972,-61.741,30.189)
P: (64.658,-55.936,31.354)
C4': (64.488,-58.944,33.822)
C2': (66.609,-59.606,33.001)
O2': (67.843,-60.252,33.241)
N1: (66.563,-63.321,28.180)
N2: (67.152,-64.980,29.631)
N3: (66.410,-62.974,30.549)
N7: (65.312,-59.953,28.924)
N9: (65.566,-60.702,31.018)
O5': (64.912,-57.261,32.164)
O3': (66.084,-59.907,35.341)
OP2: (65.864,-55.562,30.616)
C3': (65.942,-59.020,34.233)
C1': (65.538,-60.561,32.476)
C5': (64.077,-57.622,33.243)
O6: (66.037,-61.817,26.546)
O4': (64.298,-59.979,32.822)
C8: (65.191,-59.681,30.188)
C2: (66.692,-63.727,29.486)
C6: (66.118,-62.072,27.766)
C5: (65.806,-61.250,28.897)
C4: (65.972,-61.741,30.189)
P: (64.658,-55.936,31.354)
C4': (64.488,-58.944,33.822)
C2': (66.609,-59.606,33.001)
O2': (67.843,-60.252,33.241)
N1: (66.563,-63.321,28.180)
N2: (67.152,-64.980,29.631)
N3: (66.410,-62.974,30.549)
N7: (65.312,-59.953,28.924)
N9: (65.566,-60.702,31.018)
O5': (64.912,-57.261,32.164)
O3': (66.084,-59.907,35.341)
OP1: (63.294,-65.387,38.902)
OP2: (65.590,-66.256,39.515)
C3': (64.769,-65.104,34.608)
C1': (66.887,-64.267,34.109)
C5': (64.581,-63.754,36.777)
O6: (71.331,-68.190,35.117)
O4': (66.357,-63.509,35.170)
C8: (68.017,-65.579,35.990)
C2: (70.004,-66.543,32.225)
C6: (70.589,-67.448,34.450)
C5: (69.514,-66.629,34.900)
C4: (68.826,-65.879,33.967)
P: (64.752,-65.180,38.962)
C4': (64.951,-63.782,35.318)
C2': (65.723,-64.977,33.438)
O2': (65.184,-64.112,32.452)
N1: (70.761,-67.336,33.067)
N2: (70.317,-66.551,30.916)
N3: (69.002,-65.784,32.635)
N7: (68.994,-66.425,36.177)
N9: (67.864,-65.213,34.672)
O5': (65.289,-64.734,37.529)
O3': (63.440,-65.341,34.227)
OP2: (65.590,-66.256,39.515)
C3': (64.769,-65.104,34.608)
C1': (66.887,-64.267,34.109)
C5': (64.581,-63.754,36.777)
O6: (71.331,-68.190,35.117)
O4': (66.357,-63.509,35.170)
C8: (68.017,-65.579,35.990)
C2: (70.004,-66.543,32.225)
C6: (70.589,-67.448,34.450)
C5: (69.514,-66.629,34.900)
C4: (68.826,-65.879,33.967)
P: (64.752,-65.180,38.962)
C4': (64.951,-63.782,35.318)
C2': (65.723,-64.977,33.438)
O2': (65.184,-64.112,32.452)
N1: (70.761,-67.336,33.067)
N2: (70.317,-66.551,30.916)
N3: (69.002,-65.784,32.635)
N7: (68.994,-66.425,36.177)
N9: (67.864,-65.213,34.672)
O5': (65.289,-64.734,37.529)
O3': (63.440,-65.341,34.227)
Image (generated by PyMOL):