Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1809:A1810
Extra
PDB:
ATOM 1 O3' U A1808 120.515 123.760 81.467 1.00 48.75 O
ATOM 2 P G A1809 121.110 123.598 79.984 1.00 50.58 P
ATOM 3 OP1 G A1809 122.439 122.969 80.155 1.00 51.85 O
ATOM 4 OP2 G A1809 120.994 124.871 79.221 1.00 51.11 O
ATOM 5 O5' G A1809 120.134 122.547 79.289 1.00 49.63 O
ATOM 6 C5' G A1809 119.849 121.282 79.916 1.00 48.29 C
ATOM 7 C4' G A1809 118.611 120.657 79.312 1.00 48.27 C
ATOM 8 O4' G A1809 117.424 121.406 79.683 1.00 48.65 O
ATOM 9 C3' G A1809 118.538 120.614 77.799 1.00 47.26 C
ATOM 10 O3' G A1809 119.309 119.574 77.237 1.00 47.14 O
ATOM 11 C2' G A1809 117.059 120.376 77.588 1.00 47.30 C
ATOM 12 O2' G A1809 116.739 119.033 77.908 1.00 46.64 O
ATOM 13 C1' G A1809 116.472 121.328 78.634 1.00 48.12 C
ATOM 14 N9 G A1809 116.274 122.667 78.075 1.00 48.75 N
ATOM 15 C8 G A1809 117.036 123.797 78.276 1.00 49.32 C
ATOM 16 N7 G A1809 116.646 124.817 77.553 1.00 50.28 N
ATOM 17 C5 G A1809 115.550 124.340 76.846 1.00 49.42 C
ATOM 18 C6 G A1809 114.719 124.976 75.878 1.00 48.48 C
ATOM 19 O6 G A1809 114.789 126.123 75.432 1.00 46.41 O
ATOM 20 N1 G A1809 113.729 124.117 75.418 1.00 48.73 N
ATOM 21 C2 G A1809 113.556 122.817 75.828 1.00 49.12 C
ATOM 22 N2 G A1809 112.563 122.136 75.259 1.00 50.47 N
ATOM 23 N3 G A1809 114.309 122.220 76.724 1.00 49.15 N
ATOM 24 C4 G A1809 115.287 123.026 77.181 1.00 49.57 C
ATOM 25 P A A1810 119.900 119.757 75.757 1.00 48.92 P
ATOM 26 OP1 A A1810 120.878 118.659 75.519 1.00 47.79 O
ATOM 27 OP2 A A1810 120.333 121.170 75.625 1.00 47.08 O
ATOM 28 O5' A A1810 118.636 119.551 74.793 1.00 49.71 O
TER
ATOM 1 O3' G B1809 119.309 119.574 77.237 1.00 47.14 O
ATOM 2 P A B1810 119.900 119.757 75.757 1.00 48.92 P
ATOM 3 OP1 A B1810 120.878 118.659 75.519 1.00 47.79 O
ATOM 4 OP2 A B1810 120.333 121.170 75.625 1.00 47.08 O
ATOM 5 O5' A B1810 118.636 119.551 74.793 1.00 49.71 O
ATOM 6 C5' A B1810 117.802 118.364 74.918 1.00 50.45 C
ATOM 7 C4' A B1810 116.559 118.466 74.062 1.00 49.48 C
ATOM 8 O4' A B1810 115.705 119.530 74.535 1.00 49.91 O
ATOM 9 C3' A B1810 116.837 118.829 72.624 1.00 49.54 C
ATOM 10 O3' A B1810 117.225 117.687 71.890 1.00 49.63 O
ATOM 11 C2' A B1810 115.525 119.439 72.168 1.00 50.46 C
ATOM 12 O2' A B1810 114.533 118.482 71.850 1.00 50.34 O
ATOM 13 C1' A B1810 115.111 120.190 73.433 1.00 50.46 C
ATOM 14 N9 A B1810 115.582 121.572 73.434 1.00 51.62 N
ATOM 15 C8 A B1810 116.580 122.129 74.192 1.00 52.75 C
ATOM 16 N7 A B1810 116.792 123.396 73.936 1.00 53.04 N
ATOM 17 C5 A B1810 115.874 123.692 72.942 1.00 53.22 C
ATOM 18 C6 A B1810 115.606 124.870 72.224 1.00 53.58 C
ATOM 19 N6 A B1810 116.299 125.999 72.368 1.00 53.74 N
ATOM 20 N1 A B1810 114.600 124.844 71.327 1.00 53.79 N
ATOM 21 C2 A B1810 113.932 123.700 71.153 1.00 53.26 C
ATOM 22 N3 A B1810 114.109 122.521 71.747 1.00 52.93 N
ATOM 23 C4 A B1810 115.107 122.586 72.640 1.00 52.38 C
ATOM 24 P C B1811 118.321 117.847 70.747 1.00 49.24 P
ATOM 25 OP1 C B1811 118.730 116.522 70.235 1.00 49.07 O
ATOM 26 OP2 C B1811 119.341 118.764 71.307 1.00 50.50 O
ATOM 27 O5' C B1811 117.477 118.532 69.594 1.00 47.35 O
TER
ATOM 2 P G A1809 121.110 123.598 79.984 1.00 50.58 P
ATOM 3 OP1 G A1809 122.439 122.969 80.155 1.00 51.85 O
ATOM 4 OP2 G A1809 120.994 124.871 79.221 1.00 51.11 O
ATOM 5 O5' G A1809 120.134 122.547 79.289 1.00 49.63 O
ATOM 6 C5' G A1809 119.849 121.282 79.916 1.00 48.29 C
ATOM 7 C4' G A1809 118.611 120.657 79.312 1.00 48.27 C
ATOM 8 O4' G A1809 117.424 121.406 79.683 1.00 48.65 O
ATOM 9 C3' G A1809 118.538 120.614 77.799 1.00 47.26 C
ATOM 10 O3' G A1809 119.309 119.574 77.237 1.00 47.14 O
ATOM 11 C2' G A1809 117.059 120.376 77.588 1.00 47.30 C
ATOM 12 O2' G A1809 116.739 119.033 77.908 1.00 46.64 O
ATOM 13 C1' G A1809 116.472 121.328 78.634 1.00 48.12 C
ATOM 14 N9 G A1809 116.274 122.667 78.075 1.00 48.75 N
ATOM 15 C8 G A1809 117.036 123.797 78.276 1.00 49.32 C
ATOM 16 N7 G A1809 116.646 124.817 77.553 1.00 50.28 N
ATOM 17 C5 G A1809 115.550 124.340 76.846 1.00 49.42 C
ATOM 18 C6 G A1809 114.719 124.976 75.878 1.00 48.48 C
ATOM 19 O6 G A1809 114.789 126.123 75.432 1.00 46.41 O
ATOM 20 N1 G A1809 113.729 124.117 75.418 1.00 48.73 N
ATOM 21 C2 G A1809 113.556 122.817 75.828 1.00 49.12 C
ATOM 22 N2 G A1809 112.563 122.136 75.259 1.00 50.47 N
ATOM 23 N3 G A1809 114.309 122.220 76.724 1.00 49.15 N
ATOM 24 C4 G A1809 115.287 123.026 77.181 1.00 49.57 C
ATOM 25 P A A1810 119.900 119.757 75.757 1.00 48.92 P
ATOM 26 OP1 A A1810 120.878 118.659 75.519 1.00 47.79 O
ATOM 27 OP2 A A1810 120.333 121.170 75.625 1.00 47.08 O
ATOM 28 O5' A A1810 118.636 119.551 74.793 1.00 49.71 O
TER
ATOM 1 O3' G B1809 119.309 119.574 77.237 1.00 47.14 O
ATOM 2 P A B1810 119.900 119.757 75.757 1.00 48.92 P
ATOM 3 OP1 A B1810 120.878 118.659 75.519 1.00 47.79 O
ATOM 4 OP2 A B1810 120.333 121.170 75.625 1.00 47.08 O
ATOM 5 O5' A B1810 118.636 119.551 74.793 1.00 49.71 O
ATOM 6 C5' A B1810 117.802 118.364 74.918 1.00 50.45 C
ATOM 7 C4' A B1810 116.559 118.466 74.062 1.00 49.48 C
ATOM 8 O4' A B1810 115.705 119.530 74.535 1.00 49.91 O
ATOM 9 C3' A B1810 116.837 118.829 72.624 1.00 49.54 C
ATOM 10 O3' A B1810 117.225 117.687 71.890 1.00 49.63 O
ATOM 11 C2' A B1810 115.525 119.439 72.168 1.00 50.46 C
ATOM 12 O2' A B1810 114.533 118.482 71.850 1.00 50.34 O
ATOM 13 C1' A B1810 115.111 120.190 73.433 1.00 50.46 C
ATOM 14 N9 A B1810 115.582 121.572 73.434 1.00 51.62 N
ATOM 15 C8 A B1810 116.580 122.129 74.192 1.00 52.75 C
ATOM 16 N7 A B1810 116.792 123.396 73.936 1.00 53.04 N
ATOM 17 C5 A B1810 115.874 123.692 72.942 1.00 53.22 C
ATOM 18 C6 A B1810 115.606 124.870 72.224 1.00 53.58 C
ATOM 19 N6 A B1810 116.299 125.999 72.368 1.00 53.74 N
ATOM 20 N1 A B1810 114.600 124.844 71.327 1.00 53.79 N
ATOM 21 C2 A B1810 113.932 123.700 71.153 1.00 53.26 C
ATOM 22 N3 A B1810 114.109 122.521 71.747 1.00 52.93 N
ATOM 23 C4 A B1810 115.107 122.586 72.640 1.00 52.38 C
ATOM 24 P C B1811 118.321 117.847 70.747 1.00 49.24 P
ATOM 25 OP1 C B1811 118.730 116.522 70.235 1.00 49.07 O
ATOM 26 OP2 C B1811 119.341 118.764 71.307 1.00 50.50 O
ATOM 27 O5' C B1811 117.477 118.532 69.594 1.00 47.35 O
TER
Atoms:
OP1: (122.439,122.969,80.155)
OP2: (120.994,124.871,79.221)
C3': (118.538,120.614,77.799)
C1': (116.472,121.328,78.634)
C5': (119.849,121.282,79.916)
O6: (114.789,126.123,75.432)
O4': (117.424,121.406,79.683)
C8: (117.036,123.797,78.276)
C2: (113.556,122.817,75.828)
C6: (114.719,124.976,75.878)
C5: (115.550,124.340,76.846)
C4: (115.287,123.026,77.181)
P: (121.110,123.598,79.984)
C4': (118.611,120.657,79.312)
C2': (117.059,120.376,77.588)
O2': (116.739,119.033,77.908)
N1: (113.729,124.117,75.418)
N2: (112.563,122.136,75.259)
N3: (114.309,122.220,76.724)
N7: (116.646,124.817,77.553)
N9: (116.274,122.667,78.075)
O5': (120.134,122.547,79.289)
O3': (119.309,119.574,77.237)
OP2: (120.994,124.871,79.221)
C3': (118.538,120.614,77.799)
C1': (116.472,121.328,78.634)
C5': (119.849,121.282,79.916)
O6: (114.789,126.123,75.432)
O4': (117.424,121.406,79.683)
C8: (117.036,123.797,78.276)
C2: (113.556,122.817,75.828)
C6: (114.719,124.976,75.878)
C5: (115.550,124.340,76.846)
C4: (115.287,123.026,77.181)
P: (121.110,123.598,79.984)
C4': (118.611,120.657,79.312)
C2': (117.059,120.376,77.588)
O2': (116.739,119.033,77.908)
N1: (113.729,124.117,75.418)
N2: (112.563,122.136,75.259)
N3: (114.309,122.220,76.724)
N7: (116.646,124.817,77.553)
N9: (116.274,122.667,78.075)
O5': (120.134,122.547,79.289)
O3': (119.309,119.574,77.237)
OP1: (120.878,118.659,75.519)
OP2: (120.333,121.170,75.625)
C3': (116.837,118.829,72.624)
C1': (115.111,120.190,73.433)
C5': (117.802,118.364,74.918)
O4': (115.705,119.530,74.535)
C8: (116.580,122.129,74.192)
O2': (114.533,118.482,71.850)
C6: (115.606,124.870,72.224)
C5: (115.874,123.692,72.942)
C4: (115.107,122.586,72.640)
P: (119.900,119.757,75.757)
C4': (116.559,118.466,74.062)
C2': (115.525,119.439,72.168)
C2: (113.932,123.700,71.153)
N1: (114.600,124.844,71.327)
N3: (114.109,122.521,71.747)
N6: (116.299,125.999,72.368)
N7: (116.792,123.396,73.936)
N9: (115.582,121.572,73.434)
O5': (118.636,119.551,74.793)
O3': (117.225,117.687,71.890)
OP2: (120.333,121.170,75.625)
C3': (116.837,118.829,72.624)
C1': (115.111,120.190,73.433)
C5': (117.802,118.364,74.918)
O4': (115.705,119.530,74.535)
C8: (116.580,122.129,74.192)
O2': (114.533,118.482,71.850)
C6: (115.606,124.870,72.224)
C5: (115.874,123.692,72.942)
C4: (115.107,122.586,72.640)
P: (119.900,119.757,75.757)
C4': (116.559,118.466,74.062)
C2': (115.525,119.439,72.168)
C2: (113.932,123.700,71.153)
N1: (114.600,124.844,71.327)
N3: (114.109,122.521,71.747)
N6: (116.299,125.999,72.368)
N7: (116.792,123.396,73.936)
N9: (115.582,121.572,73.434)
O5': (118.636,119.551,74.793)
O3': (117.225,117.687,71.890)
Image (generated by PyMOL):