Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1868:12221
Extra
PDB:
ATOM 1 O3' C A 867 25.441 0.979 91.675 1.00 35.82 O
ATOM 2 P G A 868 24.150 0.910 90.695 1.00 38.61 P
ATOM 3 OP1 G A 868 24.597 1.301 89.346 1.00 38.41 O
ATOM 4 OP2 G A 868 23.074 1.692 91.366 1.00 38.85 O
ATOM 5 O5' G A 868 23.777 -0.623 90.696 1.00 38.53 O
ATOM 6 C5' G A 868 24.023 -1.424 91.831 1.00 38.63 C
ATOM 7 C4' G A 868 24.130 -2.854 91.450 1.00 38.48 C
ATOM 8 O4' G A 868 22.850 -3.278 90.908 1.00 38.47 O
ATOM 9 C3' G A 868 25.156 -3.127 90.386 1.00 38.24 C
ATOM 10 O3' G A 868 25.702 -4.419 90.591 1.00 38.18 O
ATOM 11 C2' G A 868 24.336 -3.091 89.100 1.00 38.12 C
ATOM 12 O2' G A 868 24.862 -3.840 88.022 1.00 37.90 O
ATOM 13 C1' G A 868 22.992 -3.645 89.551 1.00 38.25 C
ATOM 14 N9 G A 868 21.867 -3.078 88.810 1.00 38.26 N
ATOM 15 C8 G A 868 21.672 -1.747 88.598 1.00 38.32 C
ATOM 16 N7 G A 868 20.632 -1.453 87.895 1.00 38.33 N
ATOM 17 C5 G A 868 20.080 -2.692 87.658 1.00 38.28 C
ATOM 18 C6 G A 868 18.912 -3.025 86.963 1.00 38.28 C
ATOM 19 O6 G A 868 18.123 -2.225 86.419 1.00 38.34 O
ATOM 20 N1 G A 868 18.726 -4.395 86.939 1.00 38.23 N
ATOM 21 C2 G A 868 19.537 -5.322 87.498 1.00 38.19 C
ATOM 22 N2 G A 868 19.243 -6.627 87.385 1.00 38.16 N
ATOM 23 N3 G A 868 20.607 -5.000 88.140 1.00 38.19 N
ATOM 24 C4 G A 868 20.830 -3.691 88.184 1.00 38.23 C
ATOM 25 P A A 869 27.205 -4.582 91.159 1.00 41.47 P
ATOM 26 OP1 A A 869 28.099 -3.637 90.369 1.00 41.34 O
ATOM 27 OP2 A A 869 27.497 -6.001 91.158 1.00 41.40 O
ATOM 28 O5' A A 869 27.074 -4.087 92.635 1.00 41.73 O
TER
ATOM 1 O3' A B2220 27.928 -10.780 90.182 1.00 31.60 O
ATOM 2 P G B2221 26.594 -11.234 90.931 1.00 34.26 P
ATOM 3 OP1 G B2221 26.818 -11.016 92.388 1.00 34.47 O
ATOM 4 OP2 G B2221 26.255 -12.617 90.439 1.00 34.21 O
ATOM 5 O5' G B2221 25.548 -10.188 90.400 1.00 34.24 O
ATOM 6 C5' G B2221 25.164 -9.109 91.190 1.00 34.39 C
ATOM 7 C4' G B2221 24.084 -8.351 90.522 1.00 34.37 C
ATOM 8 O4' G B2221 24.354 -8.263 89.111 1.00 34.16 O
ATOM 9 C3' G B2221 22.735 -8.971 90.553 1.00 34.46 C
ATOM 10 O3' G B2221 22.118 -8.842 91.804 1.00 34.69 O
ATOM 11 C2' G B2221 22.044 -8.206 89.436 1.00 34.37 C
ATOM 12 O2' G B2221 21.842 -6.865 89.828 1.00 34.47 O
ATOM 13 C1' G B2221 23.145 -8.209 88.396 1.00 34.15 C
ATOM 14 N9 G B2221 23.097 -9.384 87.540 1.00 34.03 N
ATOM 15 C8 G B2221 24.005 -10.370 87.630 1.00 33.97 C
ATOM 16 N7 G B2221 23.779 -11.343 86.817 1.00 33.88 N
ATOM 17 C5 G B2221 22.649 -10.987 86.127 1.00 33.88 C
ATOM 18 C6 G B2221 21.935 -11.677 85.118 1.00 33.82 C
ATOM 19 O6 G B2221 22.195 -12.762 84.576 1.00 33.76 O
ATOM 20 N1 G B2221 20.831 -10.974 84.715 1.00 33.87 N
ATOM 21 C2 G B2221 20.459 -9.781 85.240 1.00 33.96 C
ATOM 22 N2 G B2221 19.399 -9.213 84.748 1.00 34.01 N
ATOM 23 N3 G B2221 21.085 -9.117 86.177 1.00 34.02 N
ATOM 24 C4 G B2221 22.212 -9.771 86.576 1.00 33.97 C
ATOM 25 P C B2222 21.578 -10.134 92.543 1.00 35.64 P
ATOM 26 OP1 C B2222 21.390 -9.783 93.935 1.00 35.88 O
ATOM 27 OP2 C B2222 22.486 -11.266 92.226 1.00 35.52 O
ATOM 28 O5' C B2222 20.178 -10.361 91.831 1.00 35.64 O
TER
ATOM 2 P G A 868 24.150 0.910 90.695 1.00 38.61 P
ATOM 3 OP1 G A 868 24.597 1.301 89.346 1.00 38.41 O
ATOM 4 OP2 G A 868 23.074 1.692 91.366 1.00 38.85 O
ATOM 5 O5' G A 868 23.777 -0.623 90.696 1.00 38.53 O
ATOM 6 C5' G A 868 24.023 -1.424 91.831 1.00 38.63 C
ATOM 7 C4' G A 868 24.130 -2.854 91.450 1.00 38.48 C
ATOM 8 O4' G A 868 22.850 -3.278 90.908 1.00 38.47 O
ATOM 9 C3' G A 868 25.156 -3.127 90.386 1.00 38.24 C
ATOM 10 O3' G A 868 25.702 -4.419 90.591 1.00 38.18 O
ATOM 11 C2' G A 868 24.336 -3.091 89.100 1.00 38.12 C
ATOM 12 O2' G A 868 24.862 -3.840 88.022 1.00 37.90 O
ATOM 13 C1' G A 868 22.992 -3.645 89.551 1.00 38.25 C
ATOM 14 N9 G A 868 21.867 -3.078 88.810 1.00 38.26 N
ATOM 15 C8 G A 868 21.672 -1.747 88.598 1.00 38.32 C
ATOM 16 N7 G A 868 20.632 -1.453 87.895 1.00 38.33 N
ATOM 17 C5 G A 868 20.080 -2.692 87.658 1.00 38.28 C
ATOM 18 C6 G A 868 18.912 -3.025 86.963 1.00 38.28 C
ATOM 19 O6 G A 868 18.123 -2.225 86.419 1.00 38.34 O
ATOM 20 N1 G A 868 18.726 -4.395 86.939 1.00 38.23 N
ATOM 21 C2 G A 868 19.537 -5.322 87.498 1.00 38.19 C
ATOM 22 N2 G A 868 19.243 -6.627 87.385 1.00 38.16 N
ATOM 23 N3 G A 868 20.607 -5.000 88.140 1.00 38.19 N
ATOM 24 C4 G A 868 20.830 -3.691 88.184 1.00 38.23 C
ATOM 25 P A A 869 27.205 -4.582 91.159 1.00 41.47 P
ATOM 26 OP1 A A 869 28.099 -3.637 90.369 1.00 41.34 O
ATOM 27 OP2 A A 869 27.497 -6.001 91.158 1.00 41.40 O
ATOM 28 O5' A A 869 27.074 -4.087 92.635 1.00 41.73 O
TER
ATOM 1 O3' A B2220 27.928 -10.780 90.182 1.00 31.60 O
ATOM 2 P G B2221 26.594 -11.234 90.931 1.00 34.26 P
ATOM 3 OP1 G B2221 26.818 -11.016 92.388 1.00 34.47 O
ATOM 4 OP2 G B2221 26.255 -12.617 90.439 1.00 34.21 O
ATOM 5 O5' G B2221 25.548 -10.188 90.400 1.00 34.24 O
ATOM 6 C5' G B2221 25.164 -9.109 91.190 1.00 34.39 C
ATOM 7 C4' G B2221 24.084 -8.351 90.522 1.00 34.37 C
ATOM 8 O4' G B2221 24.354 -8.263 89.111 1.00 34.16 O
ATOM 9 C3' G B2221 22.735 -8.971 90.553 1.00 34.46 C
ATOM 10 O3' G B2221 22.118 -8.842 91.804 1.00 34.69 O
ATOM 11 C2' G B2221 22.044 -8.206 89.436 1.00 34.37 C
ATOM 12 O2' G B2221 21.842 -6.865 89.828 1.00 34.47 O
ATOM 13 C1' G B2221 23.145 -8.209 88.396 1.00 34.15 C
ATOM 14 N9 G B2221 23.097 -9.384 87.540 1.00 34.03 N
ATOM 15 C8 G B2221 24.005 -10.370 87.630 1.00 33.97 C
ATOM 16 N7 G B2221 23.779 -11.343 86.817 1.00 33.88 N
ATOM 17 C5 G B2221 22.649 -10.987 86.127 1.00 33.88 C
ATOM 18 C6 G B2221 21.935 -11.677 85.118 1.00 33.82 C
ATOM 19 O6 G B2221 22.195 -12.762 84.576 1.00 33.76 O
ATOM 20 N1 G B2221 20.831 -10.974 84.715 1.00 33.87 N
ATOM 21 C2 G B2221 20.459 -9.781 85.240 1.00 33.96 C
ATOM 22 N2 G B2221 19.399 -9.213 84.748 1.00 34.01 N
ATOM 23 N3 G B2221 21.085 -9.117 86.177 1.00 34.02 N
ATOM 24 C4 G B2221 22.212 -9.771 86.576 1.00 33.97 C
ATOM 25 P C B2222 21.578 -10.134 92.543 1.00 35.64 P
ATOM 26 OP1 C B2222 21.390 -9.783 93.935 1.00 35.88 O
ATOM 27 OP2 C B2222 22.486 -11.266 92.226 1.00 35.52 O
ATOM 28 O5' C B2222 20.178 -10.361 91.831 1.00 35.64 O
TER
Atoms:
OP1: (24.597,1.301,89.346)
OP2: (23.074,1.692,91.366)
C3': (25.156,-3.127,90.386)
C1': (22.992,-3.645,89.551)
C5': (24.023,-1.424,91.831)
O6: (18.123,-2.225,86.419)
O4': (22.850,-3.278,90.908)
C8: (21.672,-1.747,88.598)
C2: (19.537,-5.322,87.498)
C6: (18.912,-3.025,86.963)
C5: (20.080,-2.692,87.658)
C4: (20.830,-3.691,88.184)
P: (24.150,0.910,90.695)
C4': (24.130,-2.854,91.450)
C2': (24.336,-3.091,89.100)
O2': (24.862,-3.840,88.022)
N1: (18.726,-4.395,86.939)
N2: (19.243,-6.627,87.385)
N3: (20.607,-5.000,88.140)
N7: (20.632,-1.453,87.895)
N9: (21.867,-3.078,88.810)
O5': (23.777,-0.623,90.696)
O3': (25.702,-4.419,90.591)
OP2: (23.074,1.692,91.366)
C3': (25.156,-3.127,90.386)
C1': (22.992,-3.645,89.551)
C5': (24.023,-1.424,91.831)
O6: (18.123,-2.225,86.419)
O4': (22.850,-3.278,90.908)
C8: (21.672,-1.747,88.598)
C2: (19.537,-5.322,87.498)
C6: (18.912,-3.025,86.963)
C5: (20.080,-2.692,87.658)
C4: (20.830,-3.691,88.184)
P: (24.150,0.910,90.695)
C4': (24.130,-2.854,91.450)
C2': (24.336,-3.091,89.100)
O2': (24.862,-3.840,88.022)
N1: (18.726,-4.395,86.939)
N2: (19.243,-6.627,87.385)
N3: (20.607,-5.000,88.140)
N7: (20.632,-1.453,87.895)
N9: (21.867,-3.078,88.810)
O5': (23.777,-0.623,90.696)
O3': (25.702,-4.419,90.591)
OP1: (26.818,-11.016,92.388)
OP2: (26.255,-12.617,90.439)
C3': (22.735,-8.971,90.553)
C1': (23.145,-8.209,88.396)
C5': (25.164,-9.109,91.190)
O6: (22.195,-12.762,84.576)
O4': (24.354,-8.263,89.111)
C8: (24.005,-10.370,87.630)
C2: (20.459,-9.781,85.240)
C6: (21.935,-11.677,85.118)
C5: (22.649,-10.987,86.127)
C4: (22.212,-9.771,86.576)
P: (26.594,-11.234,90.931)
C4': (24.084,-8.351,90.522)
C2': (22.044,-8.206,89.436)
O2': (21.842,-6.865,89.828)
N1: (20.831,-10.974,84.715)
N2: (19.399,-9.213,84.748)
N3: (21.085,-9.117,86.177)
N7: (23.779,-11.343,86.817)
N9: (23.097,-9.384,87.540)
O5': (25.548,-10.188,90.400)
O3': (22.118,-8.842,91.804)
OP2: (26.255,-12.617,90.439)
C3': (22.735,-8.971,90.553)
C1': (23.145,-8.209,88.396)
C5': (25.164,-9.109,91.190)
O6: (22.195,-12.762,84.576)
O4': (24.354,-8.263,89.111)
C8: (24.005,-10.370,87.630)
C2: (20.459,-9.781,85.240)
C6: (21.935,-11.677,85.118)
C5: (22.649,-10.987,86.127)
C4: (22.212,-9.771,86.576)
P: (26.594,-11.234,90.931)
C4': (24.084,-8.351,90.522)
C2': (22.044,-8.206,89.436)
O2': (21.842,-6.865,89.828)
N1: (20.831,-10.974,84.715)
N2: (19.399,-9.213,84.748)
N3: (21.085,-9.117,86.177)
N7: (23.779,-11.343,86.817)
N9: (23.097,-9.384,87.540)
O5': (25.548,-10.188,90.400)
O3': (22.118,-8.842,91.804)
Image (generated by PyMOL):