Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:51013:51016
Extra
PDB:
ATOM 1 O3' A A1012 107.429 -50.600 268.234 1.00 53.27 O
ATOM 2 P G A1013 106.399 -50.150 267.098 1.00 56.50 P
ATOM 3 OP1 G A1013 106.987 -49.010 266.383 1.00 56.00 O
ATOM 4 OP2 G A1013 105.103 -49.959 267.751 1.00 56.76 O
ATOM 5 O5' G A1013 106.377 -51.424 266.155 1.00 56.82 O
ATOM 6 C5' G A1013 107.566 -51.842 265.491 1.00 56.66 C
ATOM 7 C4' G A1013 107.500 -53.275 265.030 1.00 57.08 C
ATOM 8 O4' G A1013 107.604 -54.145 266.180 1.00 57.40 O
ATOM 9 C3' G A1013 106.217 -53.660 264.314 1.00 57.42 C
ATOM 10 O3' G A1013 106.482 -54.595 263.262 1.00 57.61 O
ATOM 11 C2' G A1013 105.386 -54.319 265.397 1.00 57.86 C
ATOM 12 O2' G A1013 104.487 -55.286 264.919 1.00 58.33 O
ATOM 13 C1' G A1013 106.441 -54.936 266.302 1.00 57.90 C
ATOM 14 N9 G A1013 106.060 -54.922 267.705 1.00 58.07 N
ATOM 15 C8 G A1013 106.270 -53.894 268.577 1.00 57.77 C
ATOM 16 N7 G A1013 105.817 -54.170 269.764 1.00 58.04 N
ATOM 17 C5 G A1013 105.295 -55.447 269.659 1.00 58.55 C
ATOM 18 C6 G A1013 104.690 -56.278 270.613 1.00 59.02 C
ATOM 19 O6 G A1013 104.466 -56.061 271.798 1.00 59.11 O
ATOM 20 N1 G A1013 104.312 -57.492 270.099 1.00 59.46 N
ATOM 21 C2 G A1013 104.490 -57.872 268.813 1.00 59.44 C
ATOM 22 N2 G A1013 104.026 -59.089 268.524 1.00 59.92 N
ATOM 23 N3 G A1013 105.073 -57.129 267.894 1.00 59.00 N
ATOM 24 C4 G A1013 105.448 -55.934 268.395 1.00 58.57 C
ATOM 25 P A A1014 105.627 -54.490 261.888 1.00 85.96 P
ATOM 26 OP1 A A1014 106.503 -53.816 260.887 1.00 85.53 O
ATOM 27 OP2 A A1014 104.291 -53.881 262.230 1.00 86.07 O
ATOM 28 O5' A A1014 105.422 -56.000 261.489 1.00 86.47 O
TER
ATOM 1 O3' A B1015 108.044 -59.366 259.310 1.00 80.31 O
ATOM 2 P G B1016 107.983 -60.554 260.385 1.00 68.97 P
ATOM 3 OP1 G B1016 109.383 -60.912 260.685 1.00 68.84 O
ATOM 4 OP2 G B1016 107.081 -61.601 259.834 1.00 69.50 O
ATOM 5 O5' G B1016 107.311 -59.866 261.656 1.00 68.91 O
ATOM 6 C5' G B1016 108.051 -58.954 262.438 1.00 68.49 C
ATOM 7 C4' G B1016 107.462 -58.785 263.809 1.00 68.61 C
ATOM 8 O4' G B1016 106.095 -58.334 263.701 1.00 68.73 O
ATOM 9 C3' G B1016 107.380 -60.036 264.664 1.00 69.09 C
ATOM 10 O3' G B1016 108.590 -60.307 265.334 1.00 68.99 O
ATOM 11 C2' G B1016 106.234 -59.709 265.606 1.00 69.27 C
ATOM 12 O2' G B1016 106.658 -58.800 266.602 1.00 68.94 O
ATOM 13 C1' G B1016 105.299 -58.966 264.671 1.00 69.16 C
ATOM 14 N9 G B1016 104.369 -59.867 263.974 1.00 69.62 N
ATOM 15 C8 G B1016 104.470 -60.257 262.680 1.00 69.68 C
ATOM 16 N7 G B1016 103.485 -61.031 262.343 1.00 70.14 N
ATOM 17 C5 G B1016 102.686 -61.144 263.458 1.00 70.41 C
ATOM 18 C6 G B1016 101.491 -61.871 263.683 1.00 70.94 C
ATOM 19 O6 G B1016 100.842 -62.602 262.917 1.00 71.31 O
ATOM 20 N1 G B1016 101.047 -61.709 264.986 1.00 71.05 N
ATOM 21 C2 G B1016 101.672 -60.952 265.958 1.00 70.70 C
ATOM 22 N2 G B1016 101.082 -60.903 267.176 1.00 70.90 N
ATOM 23 N3 G B1016 102.793 -60.287 265.742 1.00 70.21 N
ATOM 24 C4 G B1016 103.232 -60.424 264.479 1.00 70.09 C
ATOM 25 P U B1017 109.048 -61.818 265.601 1.00 72.56 P
ATOM 26 OP1 U B1017 110.383 -61.740 266.258 1.00 72.31 O
ATOM 27 OP2 U B1017 108.920 -62.537 264.316 1.00 72.77 O
ATOM 28 O5' U B1017 107.963 -62.354 266.656 1.00 73.02 O
TER
ATOM 2 P G A1013 106.399 -50.150 267.098 1.00 56.50 P
ATOM 3 OP1 G A1013 106.987 -49.010 266.383 1.00 56.00 O
ATOM 4 OP2 G A1013 105.103 -49.959 267.751 1.00 56.76 O
ATOM 5 O5' G A1013 106.377 -51.424 266.155 1.00 56.82 O
ATOM 6 C5' G A1013 107.566 -51.842 265.491 1.00 56.66 C
ATOM 7 C4' G A1013 107.500 -53.275 265.030 1.00 57.08 C
ATOM 8 O4' G A1013 107.604 -54.145 266.180 1.00 57.40 O
ATOM 9 C3' G A1013 106.217 -53.660 264.314 1.00 57.42 C
ATOM 10 O3' G A1013 106.482 -54.595 263.262 1.00 57.61 O
ATOM 11 C2' G A1013 105.386 -54.319 265.397 1.00 57.86 C
ATOM 12 O2' G A1013 104.487 -55.286 264.919 1.00 58.33 O
ATOM 13 C1' G A1013 106.441 -54.936 266.302 1.00 57.90 C
ATOM 14 N9 G A1013 106.060 -54.922 267.705 1.00 58.07 N
ATOM 15 C8 G A1013 106.270 -53.894 268.577 1.00 57.77 C
ATOM 16 N7 G A1013 105.817 -54.170 269.764 1.00 58.04 N
ATOM 17 C5 G A1013 105.295 -55.447 269.659 1.00 58.55 C
ATOM 18 C6 G A1013 104.690 -56.278 270.613 1.00 59.02 C
ATOM 19 O6 G A1013 104.466 -56.061 271.798 1.00 59.11 O
ATOM 20 N1 G A1013 104.312 -57.492 270.099 1.00 59.46 N
ATOM 21 C2 G A1013 104.490 -57.872 268.813 1.00 59.44 C
ATOM 22 N2 G A1013 104.026 -59.089 268.524 1.00 59.92 N
ATOM 23 N3 G A1013 105.073 -57.129 267.894 1.00 59.00 N
ATOM 24 C4 G A1013 105.448 -55.934 268.395 1.00 58.57 C
ATOM 25 P A A1014 105.627 -54.490 261.888 1.00 85.96 P
ATOM 26 OP1 A A1014 106.503 -53.816 260.887 1.00 85.53 O
ATOM 27 OP2 A A1014 104.291 -53.881 262.230 1.00 86.07 O
ATOM 28 O5' A A1014 105.422 -56.000 261.489 1.00 86.47 O
TER
ATOM 1 O3' A B1015 108.044 -59.366 259.310 1.00 80.31 O
ATOM 2 P G B1016 107.983 -60.554 260.385 1.00 68.97 P
ATOM 3 OP1 G B1016 109.383 -60.912 260.685 1.00 68.84 O
ATOM 4 OP2 G B1016 107.081 -61.601 259.834 1.00 69.50 O
ATOM 5 O5' G B1016 107.311 -59.866 261.656 1.00 68.91 O
ATOM 6 C5' G B1016 108.051 -58.954 262.438 1.00 68.49 C
ATOM 7 C4' G B1016 107.462 -58.785 263.809 1.00 68.61 C
ATOM 8 O4' G B1016 106.095 -58.334 263.701 1.00 68.73 O
ATOM 9 C3' G B1016 107.380 -60.036 264.664 1.00 69.09 C
ATOM 10 O3' G B1016 108.590 -60.307 265.334 1.00 68.99 O
ATOM 11 C2' G B1016 106.234 -59.709 265.606 1.00 69.27 C
ATOM 12 O2' G B1016 106.658 -58.800 266.602 1.00 68.94 O
ATOM 13 C1' G B1016 105.299 -58.966 264.671 1.00 69.16 C
ATOM 14 N9 G B1016 104.369 -59.867 263.974 1.00 69.62 N
ATOM 15 C8 G B1016 104.470 -60.257 262.680 1.00 69.68 C
ATOM 16 N7 G B1016 103.485 -61.031 262.343 1.00 70.14 N
ATOM 17 C5 G B1016 102.686 -61.144 263.458 1.00 70.41 C
ATOM 18 C6 G B1016 101.491 -61.871 263.683 1.00 70.94 C
ATOM 19 O6 G B1016 100.842 -62.602 262.917 1.00 71.31 O
ATOM 20 N1 G B1016 101.047 -61.709 264.986 1.00 71.05 N
ATOM 21 C2 G B1016 101.672 -60.952 265.958 1.00 70.70 C
ATOM 22 N2 G B1016 101.082 -60.903 267.176 1.00 70.90 N
ATOM 23 N3 G B1016 102.793 -60.287 265.742 1.00 70.21 N
ATOM 24 C4 G B1016 103.232 -60.424 264.479 1.00 70.09 C
ATOM 25 P U B1017 109.048 -61.818 265.601 1.00 72.56 P
ATOM 26 OP1 U B1017 110.383 -61.740 266.258 1.00 72.31 O
ATOM 27 OP2 U B1017 108.920 -62.537 264.316 1.00 72.77 O
ATOM 28 O5' U B1017 107.963 -62.354 266.656 1.00 73.02 O
TER
Atoms:
OP1: (106.987,-49.010,266.383)
OP2: (105.103,-49.959,267.751)
C3': (106.217,-53.660,264.314)
C1': (106.441,-54.936,266.302)
C5': (107.566,-51.842,265.491)
O6: (104.466,-56.061,271.798)
O4': (107.604,-54.145,266.180)
C8: (106.270,-53.894,268.577)
C2: (104.490,-57.872,268.813)
C6: (104.690,-56.278,270.613)
C5: (105.295,-55.447,269.659)
C4: (105.448,-55.934,268.395)
P: (106.399,-50.150,267.098)
C4': (107.500,-53.275,265.030)
C2': (105.386,-54.319,265.397)
O2': (104.487,-55.286,264.919)
N1: (104.312,-57.492,270.099)
N2: (104.026,-59.089,268.524)
N3: (105.073,-57.129,267.894)
N7: (105.817,-54.170,269.764)
N9: (106.060,-54.922,267.705)
O5': (106.377,-51.424,266.155)
O3': (106.482,-54.595,263.262)
OP2: (105.103,-49.959,267.751)
C3': (106.217,-53.660,264.314)
C1': (106.441,-54.936,266.302)
C5': (107.566,-51.842,265.491)
O6: (104.466,-56.061,271.798)
O4': (107.604,-54.145,266.180)
C8: (106.270,-53.894,268.577)
C2: (104.490,-57.872,268.813)
C6: (104.690,-56.278,270.613)
C5: (105.295,-55.447,269.659)
C4: (105.448,-55.934,268.395)
P: (106.399,-50.150,267.098)
C4': (107.500,-53.275,265.030)
C2': (105.386,-54.319,265.397)
O2': (104.487,-55.286,264.919)
N1: (104.312,-57.492,270.099)
N2: (104.026,-59.089,268.524)
N3: (105.073,-57.129,267.894)
N7: (105.817,-54.170,269.764)
N9: (106.060,-54.922,267.705)
O5': (106.377,-51.424,266.155)
O3': (106.482,-54.595,263.262)
OP1: (109.383,-60.912,260.685)
OP2: (107.081,-61.601,259.834)
C3': (107.380,-60.036,264.664)
C1': (105.299,-58.966,264.671)
C5': (108.051,-58.954,262.438)
O6: (100.842,-62.602,262.917)
O4': (106.095,-58.334,263.701)
C8: (104.470,-60.257,262.680)
C2: (101.672,-60.952,265.958)
C6: (101.491,-61.871,263.683)
C5: (102.686,-61.144,263.458)
C4: (103.232,-60.424,264.479)
P: (107.983,-60.554,260.385)
C4': (107.462,-58.785,263.809)
C2': (106.234,-59.709,265.606)
O2': (106.658,-58.800,266.602)
N1: (101.047,-61.709,264.986)
N2: (101.082,-60.903,267.176)
N3: (102.793,-60.287,265.742)
N7: (103.485,-61.031,262.343)
N9: (104.369,-59.867,263.974)
O5': (107.311,-59.866,261.656)
O3': (108.590,-60.307,265.334)
OP2: (107.081,-61.601,259.834)
C3': (107.380,-60.036,264.664)
C1': (105.299,-58.966,264.671)
C5': (108.051,-58.954,262.438)
O6: (100.842,-62.602,262.917)
O4': (106.095,-58.334,263.701)
C8: (104.470,-60.257,262.680)
C2: (101.672,-60.952,265.958)
C6: (101.491,-61.871,263.683)
C5: (102.686,-61.144,263.458)
C4: (103.232,-60.424,264.479)
P: (107.983,-60.554,260.385)
C4': (107.462,-58.785,263.809)
C2': (106.234,-59.709,265.606)
O2': (106.658,-58.800,266.602)
N1: (101.047,-61.709,264.986)
N2: (101.082,-60.903,267.176)
N3: (102.793,-60.287,265.742)
N7: (103.485,-61.031,262.343)
N9: (104.369,-59.867,263.974)
O5': (107.311,-59.866,261.656)
O3': (108.590,-60.307,265.334)
Image (generated by PyMOL):