Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01598:01503
Extra
PDB:
ATOM 1 O3' U A1597 107.770 183.655 84.744 1.00 49.93 O
ATOM 2 P C A1598 108.233 182.683 83.563 1.00 52.40 P
ATOM 3 OP1 C A1598 108.720 181.442 84.222 1.00 52.18 O
ATOM 4 OP2 C A1598 109.118 183.407 82.613 1.00 52.71 O
ATOM 5 O5' C A1598 106.864 182.381 82.813 1.00 52.04 O
ATOM 6 C5' C A1598 106.818 182.076 81.410 1.00 51.34 C
ATOM 7 C4' C A1598 105.491 182.518 80.856 1.00 52.92 C
ATOM 8 O4' C A1598 105.430 183.969 80.882 1.00 53.99 O
ATOM 9 C3' C A1598 105.174 182.156 79.417 1.00 53.33 C
ATOM 10 O3' C A1598 104.678 180.818 79.346 1.00 54.40 O
ATOM 11 C2' C A1598 104.102 183.191 79.073 1.00 53.51 C
ATOM 12 O2' C A1598 102.825 182.886 79.604 1.00 53.11 O
ATOM 13 C1' C A1598 104.631 184.429 79.806 1.00 52.32 C
ATOM 14 N1 C A1598 105.456 185.281 78.937 1.00 51.26 N
ATOM 15 C2 C A1598 104.824 186.263 78.164 1.00 50.97 C
ATOM 16 O2 C A1598 103.606 186.440 78.296 1.00 52.94 O
ATOM 17 N3 C A1598 105.557 186.995 77.300 1.00 49.66 N
ATOM 18 C4 C A1598 106.873 186.793 77.205 1.00 50.62 C
ATOM 19 N4 C A1598 107.553 187.516 76.315 1.00 51.82 N
ATOM 20 C5 C A1598 107.549 185.834 78.013 1.00 51.18 C
ATOM 21 C6 C A1598 106.810 185.107 78.857 1.00 51.27 C
ATOM 22 P A A1599 105.142 179.838 78.153 1.00 57.36 P
ATOM 23 OP1 A A1599 105.737 178.651 78.813 1.00 57.21 O
ATOM 24 OP2 A A1599 105.923 180.553 77.133 1.00 59.64 O
ATOM 25 O5' A A1599 103.767 179.406 77.472 1.00 58.94 O
TER
ATOM 1 O3' G B1502 107.146 189.180 72.082 1.00 53.27 O
ATOM 2 P U B1503 106.167 189.912 73.134 1.00 54.56 P
ATOM 3 OP1 U B1503 106.231 191.370 72.853 1.00 53.47 O
ATOM 4 OP2 U B1503 106.430 189.421 74.510 1.00 53.60 O
ATOM 5 O5' U B1503 104.719 189.429 72.688 1.00 54.30 O
ATOM 6 C5' U B1503 104.207 189.802 71.400 1.00 56.09 C
ATOM 7 C4' U B1503 102.934 189.057 71.100 1.00 57.02 C
ATOM 8 O4' U B1503 103.211 187.639 70.959 1.00 55.85 O
ATOM 9 C3' U B1503 101.869 189.108 72.181 1.00 56.49 C
ATOM 10 O3' U B1503 101.126 190.316 72.173 1.00 57.45 O
ATOM 11 C2' U B1503 101.016 187.900 71.833 1.00 56.05 C
ATOM 12 O2' U B1503 100.143 188.147 70.748 1.00 54.64 O
ATOM 13 C1' U B1503 102.096 186.895 71.422 1.00 55.93 C
ATOM 14 N1 U B1503 102.521 186.055 72.552 1.00 56.11 N
ATOM 15 C2 U B1503 101.767 184.937 72.817 1.00 56.03 C
ATOM 16 O2 U B1503 100.793 184.636 72.158 1.00 57.94 O
ATOM 17 N3 U B1503 102.193 184.182 73.880 1.00 55.91 N
ATOM 18 C4 U B1503 103.279 184.426 74.691 1.00 56.74 C
ATOM 19 O4 U B1503 103.559 183.623 75.585 1.00 56.02 O
ATOM 20 C5 U B1503 104.015 185.608 74.358 1.00 56.91 C
ATOM 21 C6 U B1503 103.621 186.364 73.323 1.00 56.85 C
ATOM 22 P C B1504 100.311 190.743 73.485 1.00 57.91 P
ATOM 23 OP1 C B1504 99.676 192.060 73.239 1.00 60.00 O
ATOM 24 OP2 C B1504 101.210 190.571 74.655 1.00 58.53 O
ATOM 25 O5' C B1504 99.152 189.658 73.565 1.00 58.84 O
TER
ATOM 2 P C A1598 108.233 182.683 83.563 1.00 52.40 P
ATOM 3 OP1 C A1598 108.720 181.442 84.222 1.00 52.18 O
ATOM 4 OP2 C A1598 109.118 183.407 82.613 1.00 52.71 O
ATOM 5 O5' C A1598 106.864 182.381 82.813 1.00 52.04 O
ATOM 6 C5' C A1598 106.818 182.076 81.410 1.00 51.34 C
ATOM 7 C4' C A1598 105.491 182.518 80.856 1.00 52.92 C
ATOM 8 O4' C A1598 105.430 183.969 80.882 1.00 53.99 O
ATOM 9 C3' C A1598 105.174 182.156 79.417 1.00 53.33 C
ATOM 10 O3' C A1598 104.678 180.818 79.346 1.00 54.40 O
ATOM 11 C2' C A1598 104.102 183.191 79.073 1.00 53.51 C
ATOM 12 O2' C A1598 102.825 182.886 79.604 1.00 53.11 O
ATOM 13 C1' C A1598 104.631 184.429 79.806 1.00 52.32 C
ATOM 14 N1 C A1598 105.456 185.281 78.937 1.00 51.26 N
ATOM 15 C2 C A1598 104.824 186.263 78.164 1.00 50.97 C
ATOM 16 O2 C A1598 103.606 186.440 78.296 1.00 52.94 O
ATOM 17 N3 C A1598 105.557 186.995 77.300 1.00 49.66 N
ATOM 18 C4 C A1598 106.873 186.793 77.205 1.00 50.62 C
ATOM 19 N4 C A1598 107.553 187.516 76.315 1.00 51.82 N
ATOM 20 C5 C A1598 107.549 185.834 78.013 1.00 51.18 C
ATOM 21 C6 C A1598 106.810 185.107 78.857 1.00 51.27 C
ATOM 22 P A A1599 105.142 179.838 78.153 1.00 57.36 P
ATOM 23 OP1 A A1599 105.737 178.651 78.813 1.00 57.21 O
ATOM 24 OP2 A A1599 105.923 180.553 77.133 1.00 59.64 O
ATOM 25 O5' A A1599 103.767 179.406 77.472 1.00 58.94 O
TER
ATOM 1 O3' G B1502 107.146 189.180 72.082 1.00 53.27 O
ATOM 2 P U B1503 106.167 189.912 73.134 1.00 54.56 P
ATOM 3 OP1 U B1503 106.231 191.370 72.853 1.00 53.47 O
ATOM 4 OP2 U B1503 106.430 189.421 74.510 1.00 53.60 O
ATOM 5 O5' U B1503 104.719 189.429 72.688 1.00 54.30 O
ATOM 6 C5' U B1503 104.207 189.802 71.400 1.00 56.09 C
ATOM 7 C4' U B1503 102.934 189.057 71.100 1.00 57.02 C
ATOM 8 O4' U B1503 103.211 187.639 70.959 1.00 55.85 O
ATOM 9 C3' U B1503 101.869 189.108 72.181 1.00 56.49 C
ATOM 10 O3' U B1503 101.126 190.316 72.173 1.00 57.45 O
ATOM 11 C2' U B1503 101.016 187.900 71.833 1.00 56.05 C
ATOM 12 O2' U B1503 100.143 188.147 70.748 1.00 54.64 O
ATOM 13 C1' U B1503 102.096 186.895 71.422 1.00 55.93 C
ATOM 14 N1 U B1503 102.521 186.055 72.552 1.00 56.11 N
ATOM 15 C2 U B1503 101.767 184.937 72.817 1.00 56.03 C
ATOM 16 O2 U B1503 100.793 184.636 72.158 1.00 57.94 O
ATOM 17 N3 U B1503 102.193 184.182 73.880 1.00 55.91 N
ATOM 18 C4 U B1503 103.279 184.426 74.691 1.00 56.74 C
ATOM 19 O4 U B1503 103.559 183.623 75.585 1.00 56.02 O
ATOM 20 C5 U B1503 104.015 185.608 74.358 1.00 56.91 C
ATOM 21 C6 U B1503 103.621 186.364 73.323 1.00 56.85 C
ATOM 22 P C B1504 100.311 190.743 73.485 1.00 57.91 P
ATOM 23 OP1 C B1504 99.676 192.060 73.239 1.00 60.00 O
ATOM 24 OP2 C B1504 101.210 190.571 74.655 1.00 58.53 O
ATOM 25 O5' C B1504 99.152 189.658 73.565 1.00 58.84 O
TER
Atoms:
C2: (104.824,186.263,78.164)
OP1: (108.720,181.442,84.222)
OP2: (109.118,183.407,82.613)
C4: (106.873,186.793,77.205)
O5': (106.864,182.381,82.813)
C3': (105.174,182.156,79.417)
C1': (104.631,184.429,79.806)
O4': (105.430,183.969,80.882)
C5': (106.818,182.076,81.410)
P: (108.233,182.683,83.563)
O2: (103.606,186.440,78.296)
C4': (105.491,182.518,80.856)
C2': (104.102,183.191,79.073)
O2': (102.825,182.886,79.604)
N1: (105.456,185.281,78.937)
N3: (105.557,186.995,77.300)
N4: (107.553,187.516,76.315)
C6: (106.810,185.107,78.857)
C5: (107.549,185.834,78.013)
O3': (104.678,180.818,79.346)
OP1: (108.720,181.442,84.222)
OP2: (109.118,183.407,82.613)
C4: (106.873,186.793,77.205)
O5': (106.864,182.381,82.813)
C3': (105.174,182.156,79.417)
C1': (104.631,184.429,79.806)
O4': (105.430,183.969,80.882)
C5': (106.818,182.076,81.410)
P: (108.233,182.683,83.563)
O2: (103.606,186.440,78.296)
C4': (105.491,182.518,80.856)
C2': (104.102,183.191,79.073)
O2': (102.825,182.886,79.604)
N1: (105.456,185.281,78.937)
N3: (105.557,186.995,77.300)
N4: (107.553,187.516,76.315)
C6: (106.810,185.107,78.857)
C5: (107.549,185.834,78.013)
O3': (104.678,180.818,79.346)
C4: (103.279,184.426,74.691)
N3: (102.193,184.182,73.880)
OP1: (106.231,191.370,72.853)
OP2: (106.430,189.421,74.510)
C2: (101.767,184.937,72.817)
C1': (102.096,186.895,71.422)
C3': (101.869,189.108,72.181)
O5': (104.719,189.429,72.688)
O4': (103.211,187.639,70.959)
C5': (104.207,189.802,71.400)
P: (106.167,189.912,73.134)
C4': (102.934,189.057,71.100)
C2': (101.016,187.900,71.833)
O2': (100.143,188.147,70.748)
N1: (102.521,186.055,72.552)
O4: (103.559,183.623,75.585)
O2: (100.793,184.636,72.158)
C6: (103.621,186.364,73.323)
C5: (104.015,185.608,74.358)
O3': (101.126,190.316,72.173)
N3: (102.193,184.182,73.880)
OP1: (106.231,191.370,72.853)
OP2: (106.430,189.421,74.510)
C2: (101.767,184.937,72.817)
C1': (102.096,186.895,71.422)
C3': (101.869,189.108,72.181)
O5': (104.719,189.429,72.688)
O4': (103.211,187.639,70.959)
C5': (104.207,189.802,71.400)
P: (106.167,189.912,73.134)
C4': (102.934,189.057,71.100)
C2': (101.016,187.900,71.833)
O2': (100.143,188.147,70.748)
N1: (102.521,186.055,72.552)
O4: (103.559,183.623,75.585)
O2: (100.793,184.636,72.158)
C6: (103.621,186.364,73.323)
C5: (104.015,185.608,74.358)
O3': (101.126,190.316,72.173)
Image (generated by PyMOL):