Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01598:01503
Extra
PDB:
ATOM 1 O3' U A1597 107.898 183.902 85.024 1.00 60.82 O
ATOM 2 P C A1598 108.451 182.955 83.858 1.00 62.42 P
ATOM 3 OP1 C A1598 109.059 181.776 84.528 1.00 61.94 O
ATOM 4 OP2 C A1598 109.250 183.741 82.875 1.00 61.79 O
ATOM 5 O5' C A1598 107.121 182.499 83.123 1.00 63.56 O
ATOM 6 C5' C A1598 107.089 182.248 81.713 1.00 64.78 C
ATOM 7 C4' C A1598 105.745 182.650 81.178 1.00 66.60 C
ATOM 8 O4' C A1598 105.642 184.094 81.219 1.00 68.07 O
ATOM 9 C3' C A1598 105.438 182.296 79.737 1.00 67.12 C
ATOM 10 O3' C A1598 104.988 180.947 79.654 1.00 67.26 O
ATOM 11 C2' C A1598 104.339 183.300 79.405 1.00 67.82 C
ATOM 12 O2' C A1598 103.082 182.954 79.960 1.00 68.97 O
ATOM 13 C1' C A1598 104.850 184.545 80.134 1.00 67.73 C
ATOM 14 N1 C A1598 105.686 185.400 79.281 1.00 67.17 N
ATOM 15 C2 C A1598 105.085 186.443 78.573 1.00 69.13 C
ATOM 16 O2 C A1598 103.873 186.654 78.724 1.00 71.85 O
ATOM 17 N3 C A1598 105.838 187.199 77.747 1.00 69.16 N
ATOM 18 C4 C A1598 107.143 186.953 77.628 1.00 70.03 C
ATOM 19 N4 C A1598 107.850 187.710 76.789 1.00 72.01 N
ATOM 20 C5 C A1598 107.785 185.916 78.360 1.00 69.70 C
ATOM 21 C6 C A1598 107.026 185.172 79.166 1.00 68.16 C
ATOM 22 P A A1599 105.413 180.031 78.407 1.00 67.82 P
ATOM 23 OP1 A A1599 106.058 178.823 78.973 1.00 67.19 O
ATOM 24 OP2 A A1599 106.151 180.846 77.434 1.00 69.91 O
ATOM 25 O5' A A1599 104.016 179.619 77.755 1.00 68.41 O
TER
ATOM 1 O3' G B1502 107.305 189.171 72.409 1.00 69.06 O
ATOM 2 P U B1503 106.313 189.857 73.482 1.00 70.62 P
ATOM 3 OP1 U B1503 106.447 191.324 73.326 1.00 70.46 O
ATOM 4 OP2 U B1503 106.505 189.249 74.819 1.00 69.56 O
ATOM 5 O5' U B1503 104.861 189.451 72.967 1.00 70.50 O
ATOM 6 C5' U B1503 104.389 189.879 71.677 1.00 70.58 C
ATOM 7 C4' U B1503 103.132 189.129 71.302 1.00 71.11 C
ATOM 8 O4' U B1503 103.437 187.717 71.173 1.00 70.01 O
ATOM 9 C3' U B1503 102.013 189.166 72.331 1.00 71.12 C
ATOM 10 O3' U B1503 101.223 190.341 72.262 1.00 71.07 O
ATOM 11 C2' U B1503 101.216 187.918 71.998 1.00 70.95 C
ATOM 12 O2' U B1503 100.336 188.090 70.905 1.00 72.55 O
ATOM 13 C1' U B1503 102.339 186.950 71.633 1.00 69.99 C
ATOM 14 N1 U B1503 102.779 186.161 72.789 1.00 69.94 N
ATOM 15 C2 U B1503 102.108 184.991 73.037 1.00 70.13 C
ATOM 16 O2 U B1503 101.185 184.612 72.351 1.00 71.65 O
ATOM 17 N3 U B1503 102.557 184.278 74.116 1.00 71.04 N
ATOM 18 C4 U B1503 103.594 184.610 74.959 1.00 71.63 C
ATOM 19 O4 U B1503 103.922 183.826 75.853 1.00 71.58 O
ATOM 20 C5 U B1503 104.239 185.850 74.645 1.00 71.59 C
ATOM 21 C6 U B1503 103.819 186.565 73.596 1.00 70.77 C
ATOM 22 P C B1504 100.481 190.860 73.584 1.00 72.33 P
ATOM 23 OP1 C B1504 99.886 192.186 73.286 1.00 73.30 O
ATOM 24 OP2 C B1504 101.433 190.723 74.716 1.00 72.87 O
ATOM 25 O5' C B1504 99.296 189.817 73.782 1.00 71.94 O
TER
ATOM 2 P C A1598 108.451 182.955 83.858 1.00 62.42 P
ATOM 3 OP1 C A1598 109.059 181.776 84.528 1.00 61.94 O
ATOM 4 OP2 C A1598 109.250 183.741 82.875 1.00 61.79 O
ATOM 5 O5' C A1598 107.121 182.499 83.123 1.00 63.56 O
ATOM 6 C5' C A1598 107.089 182.248 81.713 1.00 64.78 C
ATOM 7 C4' C A1598 105.745 182.650 81.178 1.00 66.60 C
ATOM 8 O4' C A1598 105.642 184.094 81.219 1.00 68.07 O
ATOM 9 C3' C A1598 105.438 182.296 79.737 1.00 67.12 C
ATOM 10 O3' C A1598 104.988 180.947 79.654 1.00 67.26 O
ATOM 11 C2' C A1598 104.339 183.300 79.405 1.00 67.82 C
ATOM 12 O2' C A1598 103.082 182.954 79.960 1.00 68.97 O
ATOM 13 C1' C A1598 104.850 184.545 80.134 1.00 67.73 C
ATOM 14 N1 C A1598 105.686 185.400 79.281 1.00 67.17 N
ATOM 15 C2 C A1598 105.085 186.443 78.573 1.00 69.13 C
ATOM 16 O2 C A1598 103.873 186.654 78.724 1.00 71.85 O
ATOM 17 N3 C A1598 105.838 187.199 77.747 1.00 69.16 N
ATOM 18 C4 C A1598 107.143 186.953 77.628 1.00 70.03 C
ATOM 19 N4 C A1598 107.850 187.710 76.789 1.00 72.01 N
ATOM 20 C5 C A1598 107.785 185.916 78.360 1.00 69.70 C
ATOM 21 C6 C A1598 107.026 185.172 79.166 1.00 68.16 C
ATOM 22 P A A1599 105.413 180.031 78.407 1.00 67.82 P
ATOM 23 OP1 A A1599 106.058 178.823 78.973 1.00 67.19 O
ATOM 24 OP2 A A1599 106.151 180.846 77.434 1.00 69.91 O
ATOM 25 O5' A A1599 104.016 179.619 77.755 1.00 68.41 O
TER
ATOM 1 O3' G B1502 107.305 189.171 72.409 1.00 69.06 O
ATOM 2 P U B1503 106.313 189.857 73.482 1.00 70.62 P
ATOM 3 OP1 U B1503 106.447 191.324 73.326 1.00 70.46 O
ATOM 4 OP2 U B1503 106.505 189.249 74.819 1.00 69.56 O
ATOM 5 O5' U B1503 104.861 189.451 72.967 1.00 70.50 O
ATOM 6 C5' U B1503 104.389 189.879 71.677 1.00 70.58 C
ATOM 7 C4' U B1503 103.132 189.129 71.302 1.00 71.11 C
ATOM 8 O4' U B1503 103.437 187.717 71.173 1.00 70.01 O
ATOM 9 C3' U B1503 102.013 189.166 72.331 1.00 71.12 C
ATOM 10 O3' U B1503 101.223 190.341 72.262 1.00 71.07 O
ATOM 11 C2' U B1503 101.216 187.918 71.998 1.00 70.95 C
ATOM 12 O2' U B1503 100.336 188.090 70.905 1.00 72.55 O
ATOM 13 C1' U B1503 102.339 186.950 71.633 1.00 69.99 C
ATOM 14 N1 U B1503 102.779 186.161 72.789 1.00 69.94 N
ATOM 15 C2 U B1503 102.108 184.991 73.037 1.00 70.13 C
ATOM 16 O2 U B1503 101.185 184.612 72.351 1.00 71.65 O
ATOM 17 N3 U B1503 102.557 184.278 74.116 1.00 71.04 N
ATOM 18 C4 U B1503 103.594 184.610 74.959 1.00 71.63 C
ATOM 19 O4 U B1503 103.922 183.826 75.853 1.00 71.58 O
ATOM 20 C5 U B1503 104.239 185.850 74.645 1.00 71.59 C
ATOM 21 C6 U B1503 103.819 186.565 73.596 1.00 70.77 C
ATOM 22 P C B1504 100.481 190.860 73.584 1.00 72.33 P
ATOM 23 OP1 C B1504 99.886 192.186 73.286 1.00 73.30 O
ATOM 24 OP2 C B1504 101.433 190.723 74.716 1.00 72.87 O
ATOM 25 O5' C B1504 99.296 189.817 73.782 1.00 71.94 O
TER
Atoms:
C2: (105.085,186.443,78.573)
OP1: (109.059,181.776,84.528)
OP2: (109.250,183.741,82.875)
C4: (107.143,186.953,77.628)
O5': (107.121,182.499,83.123)
C3': (105.438,182.296,79.737)
C1': (104.850,184.545,80.134)
O4': (105.642,184.094,81.219)
C5': (107.089,182.248,81.713)
P: (108.451,182.955,83.858)
O2: (103.873,186.654,78.724)
C4': (105.745,182.650,81.178)
C2': (104.339,183.300,79.405)
O2': (103.082,182.954,79.960)
N1: (105.686,185.400,79.281)
N3: (105.838,187.199,77.747)
N4: (107.850,187.710,76.789)
C6: (107.026,185.172,79.166)
C5: (107.785,185.916,78.360)
O3': (104.988,180.947,79.654)
OP1: (109.059,181.776,84.528)
OP2: (109.250,183.741,82.875)
C4: (107.143,186.953,77.628)
O5': (107.121,182.499,83.123)
C3': (105.438,182.296,79.737)
C1': (104.850,184.545,80.134)
O4': (105.642,184.094,81.219)
C5': (107.089,182.248,81.713)
P: (108.451,182.955,83.858)
O2: (103.873,186.654,78.724)
C4': (105.745,182.650,81.178)
C2': (104.339,183.300,79.405)
O2': (103.082,182.954,79.960)
N1: (105.686,185.400,79.281)
N3: (105.838,187.199,77.747)
N4: (107.850,187.710,76.789)
C6: (107.026,185.172,79.166)
C5: (107.785,185.916,78.360)
O3': (104.988,180.947,79.654)
C4: (103.594,184.610,74.959)
N3: (102.557,184.278,74.116)
OP1: (106.447,191.324,73.326)
OP2: (106.505,189.249,74.819)
C2: (102.108,184.991,73.037)
C1': (102.339,186.950,71.633)
C3': (102.013,189.166,72.331)
O5': (104.861,189.451,72.967)
O4': (103.437,187.717,71.173)
C5': (104.389,189.879,71.677)
P: (106.313,189.857,73.482)
C4': (103.132,189.129,71.302)
C2': (101.216,187.918,71.998)
O2': (100.336,188.090,70.905)
N1: (102.779,186.161,72.789)
O4: (103.922,183.826,75.853)
O2: (101.185,184.612,72.351)
C6: (103.819,186.565,73.596)
C5: (104.239,185.850,74.645)
O3': (101.223,190.341,72.262)
N3: (102.557,184.278,74.116)
OP1: (106.447,191.324,73.326)
OP2: (106.505,189.249,74.819)
C2: (102.108,184.991,73.037)
C1': (102.339,186.950,71.633)
C3': (102.013,189.166,72.331)
O5': (104.861,189.451,72.967)
O4': (103.437,187.717,71.173)
C5': (104.389,189.879,71.677)
P: (106.313,189.857,73.482)
C4': (103.132,189.129,71.302)
C2': (101.216,187.918,71.998)
O2': (100.336,188.090,70.905)
N1: (102.779,186.161,72.789)
O4: (103.922,183.826,75.853)
O2: (101.185,184.612,72.351)
C6: (103.819,186.565,73.596)
C5: (104.239,185.850,74.645)
O3': (101.223,190.341,72.262)
Image (generated by PyMOL):