ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A10:A11

Extra

PDB:
ATOM 1 O3' U A 9 181.248 111.173 -8.140 1.00 28.67 O
ATOM 2 P G A 10 182.410 110.966 -7.042 1.00 30.99 P
ATOM 3 OP1 G A 10 183.687 110.899 -7.799 1.00 33.66 O
ATOM 4 OP2 G A 10 182.052 109.860 -6.115 1.00 29.57 O
ATOM 5 O5' G A 10 182.435 112.351 -6.249 1.00 31.51 O
ATOM 6 C5' G A 10 183.094 112.472 -4.972 1.00 30.40 C
ATOM 7 C4' G A 10 183.100 113.914 -4.538 1.00 30.61 C
ATOM 8 O4' G A 10 183.908 114.683 -5.460 1.00 31.04 O
ATOM 9 C3' G A 10 181.738 114.577 -4.579 1.00 31.88 C
ATOM 10 O3' G A 10 181.005 114.294 -3.381 1.00 32.89 O
ATOM 11 C2' G A 10 182.081 116.049 -4.806 1.00 31.17 C
ATOM 12 O2' G A 10 182.484 116.719 -3.628 1.00 32.69 O
ATOM 13 C1' G A 10 183.307 115.943 -5.709 1.00 30.34 C
ATOM 14 N9 G A 10 183.018 116.012 -7.139 1.00 29.40 N
ATOM 15 C8 G A 10 183.226 115.007 -8.049 1.00 26.77 C
ATOM 16 N7 G A 10 182.884 115.335 -9.262 1.00 26.77 N
ATOM 17 C5 G A 10 182.419 116.635 -9.156 1.00 26.29 C
ATOM 18 C6 G A 10 181.907 117.496 -10.149 1.00 27.61 C
ATOM 19 O6 G A 10 181.753 117.267 -11.350 1.00 30.64 O
ATOM 20 N1 G A 10 181.545 118.733 -9.627 1.00 29.16 N
ATOM 21 C2 G A 10 181.648 119.091 -8.302 1.00 31.01 C
ATOM 22 N2 G A 10 181.225 120.333 -7.997 1.00 31.19 N
ATOM 23 N3 G A 10 182.126 118.287 -7.351 1.00 30.32 N
ATOM 24 C4 G A 10 182.492 117.078 -7.852 1.00 29.11 C
ATOM 25 P A A 11 179.479 113.786 -3.487 1.00 31.59 P
ATOM 26 OP1 A A 11 179.055 113.389 -2.107 1.00 30.84 O
ATOM 27 OP2 A A 11 179.384 112.790 -4.591 1.00 32.02 O
ATOM 28 O5' A A 11 178.715 115.107 -3.917 1.00 29.93 O
TER

ATOM 1 O3' G B 10 181.005 114.294 -3.381 1.00 32.89 O
ATOM 2 P A B 11 179.479 113.786 -3.487 1.00 31.59 P
ATOM 3 OP1 A B 11 179.055 113.389 -2.107 1.00 30.84 O
ATOM 4 OP2 A B 11 179.384 112.790 -4.591 1.00 32.02 O
ATOM 5 O5' A B 11 178.715 115.107 -3.917 1.00 29.93 O
ATOM 6 C5' A B 11 178.683 116.226 -3.036 1.00 29.00 C
ATOM 7 C4' A B 11 178.260 117.464 -3.766 1.00 27.97 C
ATOM 8 O4' A B 11 179.210 117.736 -4.825 1.00 29.18 O
ATOM 9 C3' A B 11 176.930 117.409 -4.485 1.00 29.11 C
ATOM 10 O3' A B 11 175.831 117.582 -3.624 1.00 28.80 O
ATOM 11 C2' A B 11 177.080 118.517 -5.526 1.00 28.96 C
ATOM 12 O2' A B 11 176.863 119.828 -5.053 1.00 27.81 O
ATOM 13 C1' A B 11 178.550 118.376 -5.908 1.00 28.67 C
ATOM 14 N9 A B 11 178.659 117.531 -7.094 1.00 26.95 N
ATOM 15 C8 A B 11 179.086 116.232 -7.187 1.00 27.29 C
ATOM 16 N7 A B 11 179.013 115.742 -8.400 1.00 26.71 N
ATOM 17 C5 A B 11 178.517 116.794 -9.153 1.00 24.52 C
ATOM 18 C6 A B 11 178.201 116.911 -10.511 1.00 23.73 C
ATOM 19 N6 A B 11 178.341 115.920 -11.387 1.00 25.42 N
ATOM 20 N1 A B 11 177.721 118.093 -10.944 1.00 23.18 N
ATOM 21 C2 A B 11 177.560 119.078 -10.057 1.00 24.50 C
ATOM 22 N3 A B 11 177.819 119.086 -8.755 1.00 25.56 N
ATOM 23 C4 A B 11 178.303 117.900 -8.364 1.00 24.39 C
ATOM 24 P U B 12 174.406 116.931 -4.013 1.00 29.70 P
ATOM 25 OP1 U B 12 173.464 117.511 -3.003 1.00 30.70 O
ATOM 26 OP2 U B 12 174.510 115.443 -4.133 1.00 28.82 O
ATOM 27 O5' U B 12 174.079 117.556 -5.445 1.00 24.26 O
TER

Atoms:
OP1: (183.687,110.899,-7.799)
OP2: (182.052,109.860,-6.115)
C3': (181.738,114.577,-4.579)
C1': (183.307,115.943,-5.709)
C5': (183.094,112.472,-4.972)
O6: (181.753,117.267,-11.350)
O4': (183.908,114.683,-5.460)
C8: (183.226,115.007,-8.049)
C2: (181.648,119.091,-8.302)
C6: (181.907,117.496,-10.149)
C5: (182.419,116.635,-9.156)
C4: (182.492,117.078,-7.852)
P: (182.410,110.966,-7.042)
C4': (183.100,113.914,-4.538)
C2': (182.081,116.049,-4.806)
O2': (182.484,116.719,-3.628)
N1: (181.545,118.733,-9.627)
N2: (181.225,120.333,-7.997)
N3: (182.126,118.287,-7.351)
N7: (182.884,115.335,-9.262)
N9: (183.018,116.012,-7.139)
O5': (182.435,112.351,-6.249)
O3': (181.005,114.294,-3.381)
OP1: (179.055,113.389,-2.107)
OP2: (179.384,112.790,-4.591)
C3': (176.930,117.409,-4.485)
C1': (178.550,118.376,-5.908)
C5': (178.683,116.226,-3.036)
O4': (179.210,117.736,-4.825)
C8: (179.086,116.232,-7.187)
O2': (176.863,119.828,-5.053)
C6: (178.201,116.911,-10.511)
C5: (178.517,116.794,-9.153)
C4: (178.303,117.900,-8.364)
P: (179.479,113.786,-3.487)
C4': (178.260,117.464,-3.766)
C2': (177.080,118.517,-5.526)
C2: (177.560,119.078,-10.057)
N1: (177.721,118.093,-10.944)
N3: (177.819,119.086,-8.755)
N6: (178.341,115.920,-11.387)
N7: (179.013,115.742,-8.400)
N9: (178.659,117.531,-7.094)
O5': (178.715,115.107,-3.917)
O3': (175.831,117.582,-3.624)
Image (generated by PyMOL):
PyMOL image
show in jmol