Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01598:01503
Extra
PDB:
ATOM 1 O3' U A1597 107.852 183.628 84.608 1.00 55.12 O
ATOM 2 P C A1598 108.311 182.648 83.427 1.00 55.93 P
ATOM 3 OP1 C A1598 108.820 181.402 84.057 1.00 54.81 O
ATOM 4 OP2 C A1598 109.176 183.397 82.482 1.00 57.57 O
ATOM 5 O5' C A1598 106.942 182.328 82.684 1.00 56.90 O
ATOM 6 C5' C A1598 106.890 182.056 81.273 1.00 56.68 C
ATOM 7 C4' C A1598 105.593 182.575 80.716 1.00 57.51 C
ATOM 8 O4' C A1598 105.635 184.027 80.694 1.00 58.74 O
ATOM 9 C3' C A1598 105.256 182.209 79.286 1.00 58.31 C
ATOM 10 O3' C A1598 104.714 180.891 79.220 1.00 60.39 O
ATOM 11 C2' C A1598 104.233 183.287 78.934 1.00 57.74 C
ATOM 12 O2' C A1598 102.956 183.062 79.498 1.00 56.22 O
ATOM 13 C1' C A1598 104.841 184.510 79.622 1.00 57.30 C
ATOM 14 N1 C A1598 105.696 185.297 78.719 1.00 56.90 N
ATOM 15 C2 C A1598 105.137 186.377 78.024 1.00 56.95 C
ATOM 16 O2 C A1598 103.952 186.679 78.230 1.00 57.25 O
ATOM 17 N3 C A1598 105.906 187.069 77.151 1.00 57.25 N
ATOM 18 C4 C A1598 107.185 186.730 76.972 1.00 58.13 C
ATOM 19 N4 C A1598 107.907 187.433 76.093 1.00 57.61 N
ATOM 20 C5 C A1598 107.784 185.654 77.686 1.00 58.71 C
ATOM 21 C6 C A1598 107.011 184.971 78.539 1.00 58.26 C
ATOM 22 P A A1599 105.229 179.858 78.094 1.00 62.33 P
ATOM 23 OP1 A A1599 105.820 178.710 78.823 1.00 61.25 O
ATOM 24 OP2 A A1599 106.033 180.550 77.071 1.00 63.89 O
ATOM 25 O5' A A1599 103.884 179.366 77.395 1.00 63.36 O
TER
ATOM 1 O3' G B1502 107.192 189.076 72.001 1.00 55.60 O
ATOM 2 P U B1503 106.183 189.797 73.030 1.00 56.56 P
ATOM 3 OP1 U B1503 106.211 191.244 72.744 1.00 56.63 O
ATOM 4 OP2 U B1503 106.415 189.327 74.415 1.00 56.79 O
ATOM 5 O5' U B1503 104.754 189.289 72.558 1.00 59.58 O
ATOM 6 C5' U B1503 104.235 189.680 71.276 1.00 62.45 C
ATOM 7 C4' U B1503 102.962 188.931 70.971 1.00 64.31 C
ATOM 8 O4' U B1503 103.249 187.515 70.840 1.00 64.62 O
ATOM 9 C3' U B1503 101.890 188.987 72.045 1.00 64.13 C
ATOM 10 O3' U B1503 101.125 190.175 71.981 1.00 63.68 O
ATOM 11 C2' U B1503 101.059 187.757 71.731 1.00 64.86 C
ATOM 12 O2' U B1503 100.173 187.967 70.649 1.00 66.79 O
ATOM 13 C1' U B1503 102.150 186.763 71.326 1.00 64.30 C
ATOM 14 N1 U B1503 102.611 185.937 72.450 1.00 63.76 N
ATOM 15 C2 U B1503 101.897 184.796 72.729 1.00 63.98 C
ATOM 16 O2 U B1503 100.924 184.459 72.089 1.00 66.14 O
ATOM 17 N3 U B1503 102.363 184.060 73.784 1.00 64.54 N
ATOM 18 C4 U B1503 103.452 184.339 74.574 1.00 65.64 C
ATOM 19 O4 U B1503 103.776 183.544 75.459 1.00 66.48 O
ATOM 20 C5 U B1503 104.143 185.544 74.227 1.00 65.72 C
ATOM 21 C6 U B1503 103.709 186.283 73.201 1.00 64.12 C
ATOM 22 P C B1504 100.394 190.708 73.302 1.00 65.71 P
ATOM 23 OP1 C B1504 99.831 192.047 72.999 1.00 66.16 O
ATOM 24 OP2 C B1504 101.338 190.548 74.437 1.00 65.21 O
ATOM 25 O5' C B1504 99.179 189.697 73.493 1.00 64.68 O
TER
ATOM 2 P C A1598 108.311 182.648 83.427 1.00 55.93 P
ATOM 3 OP1 C A1598 108.820 181.402 84.057 1.00 54.81 O
ATOM 4 OP2 C A1598 109.176 183.397 82.482 1.00 57.57 O
ATOM 5 O5' C A1598 106.942 182.328 82.684 1.00 56.90 O
ATOM 6 C5' C A1598 106.890 182.056 81.273 1.00 56.68 C
ATOM 7 C4' C A1598 105.593 182.575 80.716 1.00 57.51 C
ATOM 8 O4' C A1598 105.635 184.027 80.694 1.00 58.74 O
ATOM 9 C3' C A1598 105.256 182.209 79.286 1.00 58.31 C
ATOM 10 O3' C A1598 104.714 180.891 79.220 1.00 60.39 O
ATOM 11 C2' C A1598 104.233 183.287 78.934 1.00 57.74 C
ATOM 12 O2' C A1598 102.956 183.062 79.498 1.00 56.22 O
ATOM 13 C1' C A1598 104.841 184.510 79.622 1.00 57.30 C
ATOM 14 N1 C A1598 105.696 185.297 78.719 1.00 56.90 N
ATOM 15 C2 C A1598 105.137 186.377 78.024 1.00 56.95 C
ATOM 16 O2 C A1598 103.952 186.679 78.230 1.00 57.25 O
ATOM 17 N3 C A1598 105.906 187.069 77.151 1.00 57.25 N
ATOM 18 C4 C A1598 107.185 186.730 76.972 1.00 58.13 C
ATOM 19 N4 C A1598 107.907 187.433 76.093 1.00 57.61 N
ATOM 20 C5 C A1598 107.784 185.654 77.686 1.00 58.71 C
ATOM 21 C6 C A1598 107.011 184.971 78.539 1.00 58.26 C
ATOM 22 P A A1599 105.229 179.858 78.094 1.00 62.33 P
ATOM 23 OP1 A A1599 105.820 178.710 78.823 1.00 61.25 O
ATOM 24 OP2 A A1599 106.033 180.550 77.071 1.00 63.89 O
ATOM 25 O5' A A1599 103.884 179.366 77.395 1.00 63.36 O
TER
ATOM 1 O3' G B1502 107.192 189.076 72.001 1.00 55.60 O
ATOM 2 P U B1503 106.183 189.797 73.030 1.00 56.56 P
ATOM 3 OP1 U B1503 106.211 191.244 72.744 1.00 56.63 O
ATOM 4 OP2 U B1503 106.415 189.327 74.415 1.00 56.79 O
ATOM 5 O5' U B1503 104.754 189.289 72.558 1.00 59.58 O
ATOM 6 C5' U B1503 104.235 189.680 71.276 1.00 62.45 C
ATOM 7 C4' U B1503 102.962 188.931 70.971 1.00 64.31 C
ATOM 8 O4' U B1503 103.249 187.515 70.840 1.00 64.62 O
ATOM 9 C3' U B1503 101.890 188.987 72.045 1.00 64.13 C
ATOM 10 O3' U B1503 101.125 190.175 71.981 1.00 63.68 O
ATOM 11 C2' U B1503 101.059 187.757 71.731 1.00 64.86 C
ATOM 12 O2' U B1503 100.173 187.967 70.649 1.00 66.79 O
ATOM 13 C1' U B1503 102.150 186.763 71.326 1.00 64.30 C
ATOM 14 N1 U B1503 102.611 185.937 72.450 1.00 63.76 N
ATOM 15 C2 U B1503 101.897 184.796 72.729 1.00 63.98 C
ATOM 16 O2 U B1503 100.924 184.459 72.089 1.00 66.14 O
ATOM 17 N3 U B1503 102.363 184.060 73.784 1.00 64.54 N
ATOM 18 C4 U B1503 103.452 184.339 74.574 1.00 65.64 C
ATOM 19 O4 U B1503 103.776 183.544 75.459 1.00 66.48 O
ATOM 20 C5 U B1503 104.143 185.544 74.227 1.00 65.72 C
ATOM 21 C6 U B1503 103.709 186.283 73.201 1.00 64.12 C
ATOM 22 P C B1504 100.394 190.708 73.302 1.00 65.71 P
ATOM 23 OP1 C B1504 99.831 192.047 72.999 1.00 66.16 O
ATOM 24 OP2 C B1504 101.338 190.548 74.437 1.00 65.21 O
ATOM 25 O5' C B1504 99.179 189.697 73.493 1.00 64.68 O
TER
Atoms:
C2: (105.137,186.377,78.024)
OP1: (108.820,181.402,84.057)
OP2: (109.176,183.397,82.482)
C4: (107.185,186.730,76.972)
O5': (106.942,182.328,82.684)
C3': (105.256,182.209,79.286)
C1': (104.841,184.510,79.622)
O4': (105.635,184.027,80.694)
C5': (106.890,182.056,81.273)
P: (108.311,182.648,83.427)
O2: (103.952,186.679,78.230)
C4': (105.593,182.575,80.716)
C2': (104.233,183.287,78.934)
O2': (102.956,183.062,79.498)
N1: (105.696,185.297,78.719)
N3: (105.906,187.069,77.151)
N4: (107.907,187.433,76.093)
C6: (107.011,184.971,78.539)
C5: (107.784,185.654,77.686)
O3': (104.714,180.891,79.220)
OP1: (108.820,181.402,84.057)
OP2: (109.176,183.397,82.482)
C4: (107.185,186.730,76.972)
O5': (106.942,182.328,82.684)
C3': (105.256,182.209,79.286)
C1': (104.841,184.510,79.622)
O4': (105.635,184.027,80.694)
C5': (106.890,182.056,81.273)
P: (108.311,182.648,83.427)
O2: (103.952,186.679,78.230)
C4': (105.593,182.575,80.716)
C2': (104.233,183.287,78.934)
O2': (102.956,183.062,79.498)
N1: (105.696,185.297,78.719)
N3: (105.906,187.069,77.151)
N4: (107.907,187.433,76.093)
C6: (107.011,184.971,78.539)
C5: (107.784,185.654,77.686)
O3': (104.714,180.891,79.220)
C4: (103.452,184.339,74.574)
N3: (102.363,184.060,73.784)
OP1: (106.211,191.244,72.744)
OP2: (106.415,189.327,74.415)
C2: (101.897,184.796,72.729)
C1': (102.150,186.763,71.326)
C3': (101.890,188.987,72.045)
O5': (104.754,189.289,72.558)
O4': (103.249,187.515,70.840)
C5': (104.235,189.680,71.276)
P: (106.183,189.797,73.030)
C4': (102.962,188.931,70.971)
C2': (101.059,187.757,71.731)
O2': (100.173,187.967,70.649)
N1: (102.611,185.937,72.450)
O4: (103.776,183.544,75.459)
O2: (100.924,184.459,72.089)
C6: (103.709,186.283,73.201)
C5: (104.143,185.544,74.227)
O3': (101.125,190.175,71.981)
N3: (102.363,184.060,73.784)
OP1: (106.211,191.244,72.744)
OP2: (106.415,189.327,74.415)
C2: (101.897,184.796,72.729)
C1': (102.150,186.763,71.326)
C3': (101.890,188.987,72.045)
O5': (104.754,189.289,72.558)
O4': (103.249,187.515,70.840)
C5': (104.235,189.680,71.276)
P: (106.183,189.797,73.030)
C4': (102.962,188.931,70.971)
C2': (101.059,187.757,71.731)
O2': (100.173,187.967,70.649)
N1: (102.611,185.937,72.450)
O4: (103.776,183.544,75.459)
O2: (100.924,184.459,72.089)
C6: (103.709,186.283,73.201)
C5: (104.143,185.544,74.227)
O3': (101.125,190.175,71.981)
Image (generated by PyMOL):