Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A1380:A1512
Extra
PDB:
ATOM 1 O3' C A1379 188.326 103.459 -13.968 1.00 29.88 O
ATOM 2 P C A1380 188.175 101.883 -13.689 1.00 31.16 P
ATOM 3 OP1 C A1380 186.766 101.642 -13.278 1.00 32.33 O
ATOM 4 OP2 C A1380 189.266 101.431 -12.797 1.00 29.76 O
ATOM 5 O5' C A1380 188.352 101.236 -15.113 1.00 31.09 O
ATOM 6 C5' C A1380 187.545 101.676 -16.210 1.00 31.53 C
ATOM 7 C4' C A1380 188.174 101.264 -17.511 1.00 32.22 C
ATOM 8 O4' C A1380 189.465 101.910 -17.639 1.00 33.78 O
ATOM 9 C3' C A1380 188.455 99.775 -17.656 1.00 32.01 C
ATOM 10 O3' C A1380 187.306 99.115 -18.156 1.00 29.38 O
ATOM 11 C2' C A1380 189.613 99.761 -18.648 1.00 33.28 C
ATOM 12 O2' C A1380 189.159 99.935 -19.979 1.00 33.28 O
ATOM 13 C1' C A1380 190.392 101.013 -18.226 1.00 34.60 C
ATOM 14 N1 C A1380 191.456 100.749 -17.232 1.00 36.08 N
ATOM 15 C2 C A1380 192.598 100.046 -17.617 1.00 36.74 C
ATOM 16 O2 C A1380 192.691 99.646 -18.778 1.00 36.90 O
ATOM 17 N3 C A1380 193.571 99.813 -16.706 1.00 38.30 N
ATOM 18 C4 C A1380 193.426 100.239 -15.452 1.00 38.08 C
ATOM 19 N4 C A1380 194.396 99.980 -14.584 1.00 38.52 N
ATOM 20 C5 C A1380 192.276 100.950 -15.031 1.00 39.46 C
ATOM 21 C6 C A1380 191.325 101.185 -15.944 1.00 38.52 C
ATOM 22 P C A1381 187.072 97.560 -17.856 1.00 28.10 P
ATOM 23 OP1 C A1381 185.599 97.409 -17.770 1.00 29.12 O
ATOM 24 OP2 C A1381 187.927 97.086 -16.740 1.00 27.65 O
ATOM 25 O5' C A1381 187.525 96.871 -19.191 1.00 28.99 O
TER
ATOM 1 O3' C B1511 199.676 99.935 -16.390 1.00 33.73 O
ATOM 2 P U B1512 198.596 100.723 -15.491 1.00 35.11 P
ATOM 3 OP1 U B1512 197.579 99.717 -15.076 1.00 32.61 O
ATOM 4 OP2 U B1512 198.210 101.958 -16.231 1.00 33.13 O
ATOM 5 O5' U B1512 199.413 101.143 -14.183 1.00 35.15 O
ATOM 6 C5' U B1512 200.036 100.147 -13.365 1.00 35.57 C
ATOM 7 C4' U B1512 200.687 100.779 -12.155 1.00 38.23 C
ATOM 8 O4' U B1512 201.783 101.655 -12.579 1.00 38.18 O
ATOM 9 C3' U B1512 199.795 101.612 -11.227 1.00 38.95 C
ATOM 10 O3' U B1512 200.248 101.473 -9.867 1.00 37.87 O
ATOM 11 C2' U B1512 200.210 103.046 -11.573 1.00 39.23 C
ATOM 12 O2' U B1512 199.950 103.963 -10.528 1.00 41.11 O
ATOM 13 C1' U B1512 201.700 102.872 -11.873 1.00 38.17 C
ATOM 14 N1 U B1512 202.401 103.947 -12.613 1.00 38.37 N
ATOM 15 C2 U B1512 203.465 104.608 -11.946 1.00 40.66 C
ATOM 16 O2 U B1512 203.872 104.288 -10.826 1.00 44.89 O
ATOM 17 N3 U B1512 204.039 105.646 -12.636 1.00 36.32 N
ATOM 18 C4 U B1512 203.707 106.084 -13.887 1.00 36.26 C
ATOM 19 O4 U B1512 204.294 107.071 -14.340 1.00 35.33 O
ATOM 20 C5 U B1512 202.641 105.344 -14.533 1.00 33.97 C
ATOM 21 C6 U B1512 202.043 104.327 -13.891 1.00 34.61 C
TER
ATOM 2 P C A1380 188.175 101.883 -13.689 1.00 31.16 P
ATOM 3 OP1 C A1380 186.766 101.642 -13.278 1.00 32.33 O
ATOM 4 OP2 C A1380 189.266 101.431 -12.797 1.00 29.76 O
ATOM 5 O5' C A1380 188.352 101.236 -15.113 1.00 31.09 O
ATOM 6 C5' C A1380 187.545 101.676 -16.210 1.00 31.53 C
ATOM 7 C4' C A1380 188.174 101.264 -17.511 1.00 32.22 C
ATOM 8 O4' C A1380 189.465 101.910 -17.639 1.00 33.78 O
ATOM 9 C3' C A1380 188.455 99.775 -17.656 1.00 32.01 C
ATOM 10 O3' C A1380 187.306 99.115 -18.156 1.00 29.38 O
ATOM 11 C2' C A1380 189.613 99.761 -18.648 1.00 33.28 C
ATOM 12 O2' C A1380 189.159 99.935 -19.979 1.00 33.28 O
ATOM 13 C1' C A1380 190.392 101.013 -18.226 1.00 34.60 C
ATOM 14 N1 C A1380 191.456 100.749 -17.232 1.00 36.08 N
ATOM 15 C2 C A1380 192.598 100.046 -17.617 1.00 36.74 C
ATOM 16 O2 C A1380 192.691 99.646 -18.778 1.00 36.90 O
ATOM 17 N3 C A1380 193.571 99.813 -16.706 1.00 38.30 N
ATOM 18 C4 C A1380 193.426 100.239 -15.452 1.00 38.08 C
ATOM 19 N4 C A1380 194.396 99.980 -14.584 1.00 38.52 N
ATOM 20 C5 C A1380 192.276 100.950 -15.031 1.00 39.46 C
ATOM 21 C6 C A1380 191.325 101.185 -15.944 1.00 38.52 C
ATOM 22 P C A1381 187.072 97.560 -17.856 1.00 28.10 P
ATOM 23 OP1 C A1381 185.599 97.409 -17.770 1.00 29.12 O
ATOM 24 OP2 C A1381 187.927 97.086 -16.740 1.00 27.65 O
ATOM 25 O5' C A1381 187.525 96.871 -19.191 1.00 28.99 O
TER
ATOM 1 O3' C B1511 199.676 99.935 -16.390 1.00 33.73 O
ATOM 2 P U B1512 198.596 100.723 -15.491 1.00 35.11 P
ATOM 3 OP1 U B1512 197.579 99.717 -15.076 1.00 32.61 O
ATOM 4 OP2 U B1512 198.210 101.958 -16.231 1.00 33.13 O
ATOM 5 O5' U B1512 199.413 101.143 -14.183 1.00 35.15 O
ATOM 6 C5' U B1512 200.036 100.147 -13.365 1.00 35.57 C
ATOM 7 C4' U B1512 200.687 100.779 -12.155 1.00 38.23 C
ATOM 8 O4' U B1512 201.783 101.655 -12.579 1.00 38.18 O
ATOM 9 C3' U B1512 199.795 101.612 -11.227 1.00 38.95 C
ATOM 10 O3' U B1512 200.248 101.473 -9.867 1.00 37.87 O
ATOM 11 C2' U B1512 200.210 103.046 -11.573 1.00 39.23 C
ATOM 12 O2' U B1512 199.950 103.963 -10.528 1.00 41.11 O
ATOM 13 C1' U B1512 201.700 102.872 -11.873 1.00 38.17 C
ATOM 14 N1 U B1512 202.401 103.947 -12.613 1.00 38.37 N
ATOM 15 C2 U B1512 203.465 104.608 -11.946 1.00 40.66 C
ATOM 16 O2 U B1512 203.872 104.288 -10.826 1.00 44.89 O
ATOM 17 N3 U B1512 204.039 105.646 -12.636 1.00 36.32 N
ATOM 18 C4 U B1512 203.707 106.084 -13.887 1.00 36.26 C
ATOM 19 O4 U B1512 204.294 107.071 -14.340 1.00 35.33 O
ATOM 20 C5 U B1512 202.641 105.344 -14.533 1.00 33.97 C
ATOM 21 C6 U B1512 202.043 104.327 -13.891 1.00 34.61 C
TER
Atoms:
C2: (192.598,100.046,-17.617)
OP1: (186.766,101.642,-13.278)
OP2: (189.266,101.431,-12.797)
C4: (193.426,100.239,-15.452)
O5': (188.352,101.236,-15.113)
C3': (188.455,99.775,-17.656)
C1': (190.392,101.013,-18.226)
O4': (189.465,101.910,-17.639)
C5': (187.545,101.676,-16.210)
P: (188.175,101.883,-13.689)
O2: (192.691,99.646,-18.778)
C4': (188.174,101.264,-17.511)
C2': (189.613,99.761,-18.648)
O2': (189.159,99.935,-19.979)
N1: (191.456,100.749,-17.232)
N3: (193.571,99.813,-16.706)
N4: (194.396,99.980,-14.584)
C6: (191.325,101.185,-15.944)
C5: (192.276,100.950,-15.031)
O3': (187.306,99.115,-18.156)
OP1: (186.766,101.642,-13.278)
OP2: (189.266,101.431,-12.797)
C4: (193.426,100.239,-15.452)
O5': (188.352,101.236,-15.113)
C3': (188.455,99.775,-17.656)
C1': (190.392,101.013,-18.226)
O4': (189.465,101.910,-17.639)
C5': (187.545,101.676,-16.210)
P: (188.175,101.883,-13.689)
O2: (192.691,99.646,-18.778)
C4': (188.174,101.264,-17.511)
C2': (189.613,99.761,-18.648)
O2': (189.159,99.935,-19.979)
N1: (191.456,100.749,-17.232)
N3: (193.571,99.813,-16.706)
N4: (194.396,99.980,-14.584)
C6: (191.325,101.185,-15.944)
C5: (192.276,100.950,-15.031)
O3': (187.306,99.115,-18.156)
C4: (203.707,106.084,-13.887)
N3: (204.039,105.646,-12.636)
OP1: (197.579,99.717,-15.076)
OP2: (198.210,101.958,-16.231)
C2: (203.465,104.608,-11.946)
C1': (201.700,102.872,-11.873)
C3': (199.795,101.612,-11.227)
O5': (199.413,101.143,-14.183)
O4': (201.783,101.655,-12.579)
C5': (200.036,100.147,-13.365)
P: (198.596,100.723,-15.491)
C4': (200.687,100.779,-12.155)
C2': (200.210,103.046,-11.573)
O2': (199.950,103.963,-10.528)
N1: (202.401,103.947,-12.613)
O4: (204.294,107.071,-14.340)
O2: (203.872,104.288,-10.826)
C6: (202.043,104.327,-13.891)
C5: (202.641,105.344,-14.533)
O3': (200.248,101.473,-9.867)
N3: (204.039,105.646,-12.636)
OP1: (197.579,99.717,-15.076)
OP2: (198.210,101.958,-16.231)
C2: (203.465,104.608,-11.946)
C1': (201.700,102.872,-11.873)
C3': (199.795,101.612,-11.227)
O5': (199.413,101.143,-14.183)
O4': (201.783,101.655,-12.579)
C5': (200.036,100.147,-13.365)
P: (198.596,100.723,-15.491)
C4': (200.687,100.779,-12.155)
C2': (200.210,103.046,-11.573)
O2': (199.950,103.963,-10.528)
N1: (202.401,103.947,-12.613)
O4: (204.294,107.071,-14.340)
O2: (203.872,104.288,-10.826)
C6: (202.043,104.327,-13.891)
C5: (202.641,105.344,-14.533)
O3': (200.248,101.473,-9.867)
Image (generated by PyMOL):