Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1380:A1512
Extra
PDB:
ATOM 1 O3' C A1379 188.675 103.569 -13.804 1.00 62.33 O
ATOM 2 P C A1380 188.502 101.982 -13.587 1.00 63.85 P
ATOM 3 OP1 C A1380 187.091 101.745 -13.189 1.00 64.57 O
ATOM 4 OP2 C A1380 189.582 101.455 -12.714 1.00 61.98 O
ATOM 5 O5' C A1380 188.699 101.385 -15.039 1.00 63.33 O
ATOM 6 C5' C A1380 187.920 101.862 -16.142 1.00 63.34 C
ATOM 7 C4' C A1380 188.509 101.372 -17.441 1.00 64.17 C
ATOM 8 O4' C A1380 189.802 101.996 -17.650 1.00 66.54 O
ATOM 9 C3' C A1380 188.770 99.874 -17.516 1.00 63.58 C
ATOM 10 O3' C A1380 187.603 99.196 -17.949 1.00 61.31 O
ATOM 11 C2' C A1380 189.898 99.794 -18.538 1.00 64.79 C
ATOM 12 O2' C A1380 189.390 99.886 -19.855 1.00 64.48 O
ATOM 13 C1' C A1380 190.707 101.057 -18.211 1.00 66.41 C
ATOM 14 N1 C A1380 191.788 100.817 -17.221 1.00 68.25 N
ATOM 15 C2 C A1380 192.887 100.030 -17.584 1.00 68.99 C
ATOM 16 O2 C A1380 192.950 99.588 -18.733 1.00 71.50 O
ATOM 17 N3 C A1380 193.848 99.768 -16.666 1.00 68.81 N
ATOM 18 C4 C A1380 193.740 100.253 -15.430 1.00 68.87 C
ATOM 19 N4 C A1380 194.687 99.941 -14.548 1.00 67.47 N
ATOM 20 C5 C A1380 192.647 101.076 -15.039 1.00 69.39 C
ATOM 21 C6 C A1380 191.707 101.334 -15.957 1.00 68.94 C
ATOM 22 P C A1381 187.433 97.620 -17.681 1.00 59.89 P
ATOM 23 OP1 C A1381 185.962 97.407 -17.673 1.00 60.34 O
ATOM 24 OP2 C A1381 188.272 97.165 -16.534 1.00 58.00 O
ATOM 25 O5' C A1381 187.937 96.966 -19.020 1.00 60.02 O
TER
ATOM 1 O3' C B1511 200.078 99.978 -16.165 1.00 63.75 O
ATOM 2 P U B1512 198.973 100.741 -15.276 1.00 63.69 P
ATOM 3 OP1 U B1512 197.963 99.695 -14.930 1.00 60.44 O
ATOM 4 OP2 U B1512 198.584 101.998 -15.983 1.00 59.47 O
ATOM 5 O5' U B1512 199.754 101.124 -13.938 1.00 64.06 O
ATOM 6 C5' U B1512 200.338 100.106 -13.116 1.00 64.25 C
ATOM 7 C4' U B1512 201.003 100.716 -11.904 1.00 66.91 C
ATOM 8 O4' U B1512 202.115 101.568 -12.337 1.00 67.79 O
ATOM 9 C3' U B1512 200.124 101.572 -10.977 1.00 67.99 C
ATOM 10 O3' U B1512 200.567 101.529 -9.596 1.00 65.95 O
ATOM 11 C2' U B1512 200.542 102.994 -11.358 1.00 68.39 C
ATOM 12 O2' U B1512 200.305 103.942 -10.336 1.00 69.65 O
ATOM 13 C1' U B1512 202.028 102.806 -11.668 1.00 68.08 C
ATOM 14 N1 U B1512 202.697 103.875 -12.439 1.00 68.25 N
ATOM 15 C2 U B1512 203.809 104.491 -11.836 1.00 71.77 C
ATOM 16 O2 U B1512 204.317 104.095 -10.788 1.00 76.34 O
ATOM 17 N3 U B1512 204.317 105.577 -12.505 1.00 69.88 N
ATOM 18 C4 U B1512 203.879 106.089 -13.695 1.00 68.50 C
ATOM 19 O4 U B1512 204.385 107.138 -14.111 1.00 68.21 O
ATOM 20 C5 U B1512 202.783 105.366 -14.297 1.00 65.10 C
ATOM 21 C6 U B1512 202.248 104.308 -13.664 1.00 64.93 C
TER
ATOM 2 P C A1380 188.502 101.982 -13.587 1.00 63.85 P
ATOM 3 OP1 C A1380 187.091 101.745 -13.189 1.00 64.57 O
ATOM 4 OP2 C A1380 189.582 101.455 -12.714 1.00 61.98 O
ATOM 5 O5' C A1380 188.699 101.385 -15.039 1.00 63.33 O
ATOM 6 C5' C A1380 187.920 101.862 -16.142 1.00 63.34 C
ATOM 7 C4' C A1380 188.509 101.372 -17.441 1.00 64.17 C
ATOM 8 O4' C A1380 189.802 101.996 -17.650 1.00 66.54 O
ATOM 9 C3' C A1380 188.770 99.874 -17.516 1.00 63.58 C
ATOM 10 O3' C A1380 187.603 99.196 -17.949 1.00 61.31 O
ATOM 11 C2' C A1380 189.898 99.794 -18.538 1.00 64.79 C
ATOM 12 O2' C A1380 189.390 99.886 -19.855 1.00 64.48 O
ATOM 13 C1' C A1380 190.707 101.057 -18.211 1.00 66.41 C
ATOM 14 N1 C A1380 191.788 100.817 -17.221 1.00 68.25 N
ATOM 15 C2 C A1380 192.887 100.030 -17.584 1.00 68.99 C
ATOM 16 O2 C A1380 192.950 99.588 -18.733 1.00 71.50 O
ATOM 17 N3 C A1380 193.848 99.768 -16.666 1.00 68.81 N
ATOM 18 C4 C A1380 193.740 100.253 -15.430 1.00 68.87 C
ATOM 19 N4 C A1380 194.687 99.941 -14.548 1.00 67.47 N
ATOM 20 C5 C A1380 192.647 101.076 -15.039 1.00 69.39 C
ATOM 21 C6 C A1380 191.707 101.334 -15.957 1.00 68.94 C
ATOM 22 P C A1381 187.433 97.620 -17.681 1.00 59.89 P
ATOM 23 OP1 C A1381 185.962 97.407 -17.673 1.00 60.34 O
ATOM 24 OP2 C A1381 188.272 97.165 -16.534 1.00 58.00 O
ATOM 25 O5' C A1381 187.937 96.966 -19.020 1.00 60.02 O
TER
ATOM 1 O3' C B1511 200.078 99.978 -16.165 1.00 63.75 O
ATOM 2 P U B1512 198.973 100.741 -15.276 1.00 63.69 P
ATOM 3 OP1 U B1512 197.963 99.695 -14.930 1.00 60.44 O
ATOM 4 OP2 U B1512 198.584 101.998 -15.983 1.00 59.47 O
ATOM 5 O5' U B1512 199.754 101.124 -13.938 1.00 64.06 O
ATOM 6 C5' U B1512 200.338 100.106 -13.116 1.00 64.25 C
ATOM 7 C4' U B1512 201.003 100.716 -11.904 1.00 66.91 C
ATOM 8 O4' U B1512 202.115 101.568 -12.337 1.00 67.79 O
ATOM 9 C3' U B1512 200.124 101.572 -10.977 1.00 67.99 C
ATOM 10 O3' U B1512 200.567 101.529 -9.596 1.00 65.95 O
ATOM 11 C2' U B1512 200.542 102.994 -11.358 1.00 68.39 C
ATOM 12 O2' U B1512 200.305 103.942 -10.336 1.00 69.65 O
ATOM 13 C1' U B1512 202.028 102.806 -11.668 1.00 68.08 C
ATOM 14 N1 U B1512 202.697 103.875 -12.439 1.00 68.25 N
ATOM 15 C2 U B1512 203.809 104.491 -11.836 1.00 71.77 C
ATOM 16 O2 U B1512 204.317 104.095 -10.788 1.00 76.34 O
ATOM 17 N3 U B1512 204.317 105.577 -12.505 1.00 69.88 N
ATOM 18 C4 U B1512 203.879 106.089 -13.695 1.00 68.50 C
ATOM 19 O4 U B1512 204.385 107.138 -14.111 1.00 68.21 O
ATOM 20 C5 U B1512 202.783 105.366 -14.297 1.00 65.10 C
ATOM 21 C6 U B1512 202.248 104.308 -13.664 1.00 64.93 C
TER
Atoms:
C2: (192.887,100.030,-17.584)
OP1: (187.091,101.745,-13.189)
OP2: (189.582,101.455,-12.714)
C4: (193.740,100.253,-15.430)
O5': (188.699,101.385,-15.039)
C3': (188.770,99.874,-17.516)
C1': (190.707,101.057,-18.211)
O4': (189.802,101.996,-17.650)
C5': (187.920,101.862,-16.142)
P: (188.502,101.982,-13.587)
O2: (192.950,99.588,-18.733)
C4': (188.509,101.372,-17.441)
C2': (189.898,99.794,-18.538)
O2': (189.390,99.886,-19.855)
N1: (191.788,100.817,-17.221)
N3: (193.848,99.768,-16.666)
N4: (194.687,99.941,-14.548)
C6: (191.707,101.334,-15.957)
C5: (192.647,101.076,-15.039)
O3': (187.603,99.196,-17.949)
OP1: (187.091,101.745,-13.189)
OP2: (189.582,101.455,-12.714)
C4: (193.740,100.253,-15.430)
O5': (188.699,101.385,-15.039)
C3': (188.770,99.874,-17.516)
C1': (190.707,101.057,-18.211)
O4': (189.802,101.996,-17.650)
C5': (187.920,101.862,-16.142)
P: (188.502,101.982,-13.587)
O2: (192.950,99.588,-18.733)
C4': (188.509,101.372,-17.441)
C2': (189.898,99.794,-18.538)
O2': (189.390,99.886,-19.855)
N1: (191.788,100.817,-17.221)
N3: (193.848,99.768,-16.666)
N4: (194.687,99.941,-14.548)
C6: (191.707,101.334,-15.957)
C5: (192.647,101.076,-15.039)
O3': (187.603,99.196,-17.949)
C4: (203.879,106.089,-13.695)
N3: (204.317,105.577,-12.505)
OP1: (197.963,99.695,-14.930)
OP2: (198.584,101.998,-15.983)
C2: (203.809,104.491,-11.836)
C1': (202.028,102.806,-11.668)
C3': (200.124,101.572,-10.977)
O5': (199.754,101.124,-13.938)
O4': (202.115,101.568,-12.337)
C5': (200.338,100.106,-13.116)
P: (198.973,100.741,-15.276)
C4': (201.003,100.716,-11.904)
C2': (200.542,102.994,-11.358)
O2': (200.305,103.942,-10.336)
N1: (202.697,103.875,-12.439)
O4: (204.385,107.138,-14.111)
O2: (204.317,104.095,-10.788)
C6: (202.248,104.308,-13.664)
C5: (202.783,105.366,-14.297)
O3': (200.567,101.529,-9.596)
N3: (204.317,105.577,-12.505)
OP1: (197.963,99.695,-14.930)
OP2: (198.584,101.998,-15.983)
C2: (203.809,104.491,-11.836)
C1': (202.028,102.806,-11.668)
C3': (200.124,101.572,-10.977)
O5': (199.754,101.124,-13.938)
O4': (202.115,101.568,-12.337)
C5': (200.338,100.106,-13.116)
P: (198.973,100.741,-15.276)
C4': (201.003,100.716,-11.904)
C2': (200.542,102.994,-11.358)
O2': (200.305,103.942,-10.336)
N1: (202.697,103.875,-12.439)
O4: (204.385,107.138,-14.111)
O2: (204.317,104.095,-10.788)
C6: (202.248,104.308,-13.664)
C5: (202.783,105.366,-14.297)
O3': (200.567,101.529,-9.596)
Image (generated by PyMOL):