Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0484:0486
Extra
PDB:
ATOM 1 O3' A A 483 33.805 179.173 72.705 1.00 61.55 O
ATOM 2 P G A 484 32.369 178.747 72.119 1.00 63.66 P
ATOM 3 OP1 G A 484 31.727 179.980 71.602 1.00 65.05 O
ATOM 4 OP2 G A 484 31.663 177.932 73.139 1.00 62.87 O
ATOM 5 O5' G A 484 32.735 177.817 70.879 1.00 64.18 O
ATOM 6 C5' G A 484 33.769 178.205 69.957 1.00 65.73 C
ATOM 7 C4' G A 484 34.451 176.984 69.386 1.00 67.81 C
ATOM 8 O4' G A 484 34.963 176.174 70.479 1.00 67.67 O
ATOM 9 C3' G A 484 33.574 176.055 68.552 1.00 70.13 C
ATOM 10 O3' G A 484 34.377 175.439 67.548 1.00 75.94 O
ATOM 11 C2' G A 484 33.152 175.002 69.568 1.00 68.48 C
ATOM 12 O2' G A 484 32.813 173.771 68.966 1.00 69.56 O
ATOM 13 C1' G A 484 34.429 174.869 70.391 1.00 66.21 C
ATOM 14 N9 G A 484 34.233 174.354 71.742 1.00 63.16 N
ATOM 15 C8 G A 484 33.439 174.878 72.733 1.00 62.17 C
ATOM 16 N7 G A 484 33.461 174.175 73.831 1.00 60.96 N
ATOM 17 C5 G A 484 34.326 173.128 73.551 1.00 61.66 C
ATOM 18 C6 G A 484 34.738 172.035 74.356 1.00 61.58 C
ATOM 19 O6 G A 484 34.418 171.770 75.518 1.00 63.35 O
ATOM 20 N1 G A 484 35.615 171.199 73.673 1.00 60.79 N
ATOM 21 C2 G A 484 36.043 171.389 72.385 1.00 61.04 C
ATOM 22 N2 G A 484 36.884 170.465 71.895 1.00 61.18 N
ATOM 23 N3 G A 484 35.672 172.407 71.627 1.00 61.53 N
ATOM 24 C4 G A 484 34.815 173.228 72.268 1.00 62.08 C
ATOM 25 P A A 485 34.452 176.084 66.076 1.00 80.37 P
ATOM 26 OP1 A A 485 35.827 176.625 65.883 1.00 79.06 O
ATOM 27 OP2 A A 485 33.274 176.985 65.917 1.00 79.91 O
ATOM 28 O5' A A 485 34.282 174.838 65.096 1.00 82.84 O
TER
ATOM 1 O3' A B 485 31.930 172.031 64.857 1.00 86.57 O
ATOM 2 P A B 486 31.720 171.010 66.086 1.00 83.47 P
ATOM 3 OP1 A B 486 31.100 169.785 65.504 1.00 84.17 O
ATOM 4 OP2 A B 486 31.010 171.748 67.164 1.00 83.24 O
ATOM 5 O5' A B 486 33.181 170.657 66.619 1.00 76.09 O
ATOM 6 C5' A B 486 33.890 169.486 66.160 1.00 66.01 C
ATOM 7 C4' A B 486 34.214 168.576 67.324 1.00 59.83 C
ATOM 8 O4' A B 486 34.653 169.387 68.444 1.00 57.75 O
ATOM 9 C3' A B 486 33.056 167.777 67.897 1.00 57.12 C
ATOM 10 O3' A B 486 32.861 166.571 67.175 1.00 54.77 O
ATOM 11 C2' A B 486 33.523 167.488 69.315 1.00 55.55 C
ATOM 12 O2' A B 486 34.442 166.418 69.375 1.00 53.76 O
ATOM 13 C1' A B 486 34.244 168.790 69.662 1.00 55.00 C
ATOM 14 N9 A B 486 33.421 169.748 70.399 1.00 52.96 N
ATOM 15 C8 A B 486 32.848 170.908 69.941 1.00 52.08 C
ATOM 16 N7 A B 486 32.187 171.570 70.859 1.00 52.47 N
ATOM 17 C5 A B 486 32.328 170.790 71.998 1.00 52.96 C
ATOM 18 C6 A B 486 31.869 170.950 73.319 1.00 53.15 C
ATOM 19 N6 A B 486 31.160 171.998 73.735 1.00 52.67 N
ATOM 20 N1 A B 486 32.178 169.985 74.213 1.00 54.59 N
ATOM 21 C2 A B 486 32.907 168.939 73.799 1.00 54.74 C
ATOM 22 N3 A B 486 33.405 168.683 72.589 1.00 53.57 N
ATOM 23 C4 A B 486 33.077 169.660 71.726 1.00 53.05 C
ATOM 24 P G B 487 31.402 165.905 67.118 1.00 52.88 P
ATOM 25 OP1 G B 487 31.585 164.535 66.582 1.00 51.98 O
ATOM 26 OP2 G B 487 30.489 166.848 66.427 1.00 53.63 O
ATOM 27 O5' G B 487 30.952 165.814 68.643 1.00 50.42 O
TER
ATOM 2 P G A 484 32.369 178.747 72.119 1.00 63.66 P
ATOM 3 OP1 G A 484 31.727 179.980 71.602 1.00 65.05 O
ATOM 4 OP2 G A 484 31.663 177.932 73.139 1.00 62.87 O
ATOM 5 O5' G A 484 32.735 177.817 70.879 1.00 64.18 O
ATOM 6 C5' G A 484 33.769 178.205 69.957 1.00 65.73 C
ATOM 7 C4' G A 484 34.451 176.984 69.386 1.00 67.81 C
ATOM 8 O4' G A 484 34.963 176.174 70.479 1.00 67.67 O
ATOM 9 C3' G A 484 33.574 176.055 68.552 1.00 70.13 C
ATOM 10 O3' G A 484 34.377 175.439 67.548 1.00 75.94 O
ATOM 11 C2' G A 484 33.152 175.002 69.568 1.00 68.48 C
ATOM 12 O2' G A 484 32.813 173.771 68.966 1.00 69.56 O
ATOM 13 C1' G A 484 34.429 174.869 70.391 1.00 66.21 C
ATOM 14 N9 G A 484 34.233 174.354 71.742 1.00 63.16 N
ATOM 15 C8 G A 484 33.439 174.878 72.733 1.00 62.17 C
ATOM 16 N7 G A 484 33.461 174.175 73.831 1.00 60.96 N
ATOM 17 C5 G A 484 34.326 173.128 73.551 1.00 61.66 C
ATOM 18 C6 G A 484 34.738 172.035 74.356 1.00 61.58 C
ATOM 19 O6 G A 484 34.418 171.770 75.518 1.00 63.35 O
ATOM 20 N1 G A 484 35.615 171.199 73.673 1.00 60.79 N
ATOM 21 C2 G A 484 36.043 171.389 72.385 1.00 61.04 C
ATOM 22 N2 G A 484 36.884 170.465 71.895 1.00 61.18 N
ATOM 23 N3 G A 484 35.672 172.407 71.627 1.00 61.53 N
ATOM 24 C4 G A 484 34.815 173.228 72.268 1.00 62.08 C
ATOM 25 P A A 485 34.452 176.084 66.076 1.00 80.37 P
ATOM 26 OP1 A A 485 35.827 176.625 65.883 1.00 79.06 O
ATOM 27 OP2 A A 485 33.274 176.985 65.917 1.00 79.91 O
ATOM 28 O5' A A 485 34.282 174.838 65.096 1.00 82.84 O
TER
ATOM 1 O3' A B 485 31.930 172.031 64.857 1.00 86.57 O
ATOM 2 P A B 486 31.720 171.010 66.086 1.00 83.47 P
ATOM 3 OP1 A B 486 31.100 169.785 65.504 1.00 84.17 O
ATOM 4 OP2 A B 486 31.010 171.748 67.164 1.00 83.24 O
ATOM 5 O5' A B 486 33.181 170.657 66.619 1.00 76.09 O
ATOM 6 C5' A B 486 33.890 169.486 66.160 1.00 66.01 C
ATOM 7 C4' A B 486 34.214 168.576 67.324 1.00 59.83 C
ATOM 8 O4' A B 486 34.653 169.387 68.444 1.00 57.75 O
ATOM 9 C3' A B 486 33.056 167.777 67.897 1.00 57.12 C
ATOM 10 O3' A B 486 32.861 166.571 67.175 1.00 54.77 O
ATOM 11 C2' A B 486 33.523 167.488 69.315 1.00 55.55 C
ATOM 12 O2' A B 486 34.442 166.418 69.375 1.00 53.76 O
ATOM 13 C1' A B 486 34.244 168.790 69.662 1.00 55.00 C
ATOM 14 N9 A B 486 33.421 169.748 70.399 1.00 52.96 N
ATOM 15 C8 A B 486 32.848 170.908 69.941 1.00 52.08 C
ATOM 16 N7 A B 486 32.187 171.570 70.859 1.00 52.47 N
ATOM 17 C5 A B 486 32.328 170.790 71.998 1.00 52.96 C
ATOM 18 C6 A B 486 31.869 170.950 73.319 1.00 53.15 C
ATOM 19 N6 A B 486 31.160 171.998 73.735 1.00 52.67 N
ATOM 20 N1 A B 486 32.178 169.985 74.213 1.00 54.59 N
ATOM 21 C2 A B 486 32.907 168.939 73.799 1.00 54.74 C
ATOM 22 N3 A B 486 33.405 168.683 72.589 1.00 53.57 N
ATOM 23 C4 A B 486 33.077 169.660 71.726 1.00 53.05 C
ATOM 24 P G B 487 31.402 165.905 67.118 1.00 52.88 P
ATOM 25 OP1 G B 487 31.585 164.535 66.582 1.00 51.98 O
ATOM 26 OP2 G B 487 30.489 166.848 66.427 1.00 53.63 O
ATOM 27 O5' G B 487 30.952 165.814 68.643 1.00 50.42 O
TER
Atoms:
OP1: (31.727,179.980,71.602)
OP2: (31.663,177.932,73.139)
C3': (33.574,176.055,68.552)
C1': (34.429,174.869,70.391)
C5': (33.769,178.205,69.957)
O6: (34.418,171.770,75.518)
O4': (34.963,176.174,70.479)
C8: (33.439,174.878,72.733)
C2: (36.043,171.389,72.385)
C6: (34.738,172.035,74.356)
C5: (34.326,173.128,73.551)
C4: (34.815,173.228,72.268)
P: (32.369,178.747,72.119)
C4': (34.451,176.984,69.386)
C2': (33.152,175.002,69.568)
O2': (32.813,173.771,68.966)
N1: (35.615,171.199,73.673)
N2: (36.884,170.465,71.895)
N3: (35.672,172.407,71.627)
N7: (33.461,174.175,73.831)
N9: (34.233,174.354,71.742)
O5': (32.735,177.817,70.879)
O3': (34.377,175.439,67.548)
OP2: (31.663,177.932,73.139)
C3': (33.574,176.055,68.552)
C1': (34.429,174.869,70.391)
C5': (33.769,178.205,69.957)
O6: (34.418,171.770,75.518)
O4': (34.963,176.174,70.479)
C8: (33.439,174.878,72.733)
C2: (36.043,171.389,72.385)
C6: (34.738,172.035,74.356)
C5: (34.326,173.128,73.551)
C4: (34.815,173.228,72.268)
P: (32.369,178.747,72.119)
C4': (34.451,176.984,69.386)
C2': (33.152,175.002,69.568)
O2': (32.813,173.771,68.966)
N1: (35.615,171.199,73.673)
N2: (36.884,170.465,71.895)
N3: (35.672,172.407,71.627)
N7: (33.461,174.175,73.831)
N9: (34.233,174.354,71.742)
O5': (32.735,177.817,70.879)
O3': (34.377,175.439,67.548)
OP1: (31.100,169.785,65.504)
OP2: (31.010,171.748,67.164)
C3': (33.056,167.777,67.897)
C1': (34.244,168.790,69.662)
C5': (33.890,169.486,66.160)
O4': (34.653,169.387,68.444)
C8: (32.848,170.908,69.941)
O2': (34.442,166.418,69.375)
C6: (31.869,170.950,73.319)
C5: (32.328,170.790,71.998)
C4: (33.077,169.660,71.726)
P: (31.720,171.010,66.086)
C4': (34.214,168.576,67.324)
C2': (33.523,167.488,69.315)
C2: (32.907,168.939,73.799)
N1: (32.178,169.985,74.213)
N3: (33.405,168.683,72.589)
N6: (31.160,171.998,73.735)
N7: (32.187,171.570,70.859)
N9: (33.421,169.748,70.399)
O5': (33.181,170.657,66.619)
O3': (32.861,166.571,67.175)
OP2: (31.010,171.748,67.164)
C3': (33.056,167.777,67.897)
C1': (34.244,168.790,69.662)
C5': (33.890,169.486,66.160)
O4': (34.653,169.387,68.444)
C8: (32.848,170.908,69.941)
O2': (34.442,166.418,69.375)
C6: (31.869,170.950,73.319)
C5: (32.328,170.790,71.998)
C4: (33.077,169.660,71.726)
P: (31.720,171.010,66.086)
C4': (34.214,168.576,67.324)
C2': (33.523,167.488,69.315)
C2: (32.907,168.939,73.799)
N1: (32.178,169.985,74.213)
N3: (33.405,168.683,72.589)
N6: (31.160,171.998,73.735)
N7: (32.187,171.570,70.859)
N9: (33.421,169.748,70.399)
O5': (33.181,170.657,66.619)
O3': (32.861,166.571,67.175)
Image (generated by PyMOL):