Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A624:A625
Extra
PDB:
ATOM 1 O3' C A 623 -96.789 -77.308 64.355 1.00 0.01 O
ATOM 2 P G A 624 -98.249 -76.956 64.831 1.00 0.01 P
ATOM 3 OP1 G A 624 -99.032 -76.625 63.615 1.00 0.01 O
ATOM 4 OP2 G A 624 -98.119 -75.962 65.908 1.00 0.01 O
ATOM 5 O5' G A 624 -98.750 -78.314 65.422 1.00 0.01 O
ATOM 6 C5' G A 624 -99.396 -79.244 64.603 1.00 0.01 C
ATOM 7 C4' G A 624 -99.703 -80.491 65.356 1.00 0.01 C
ATOM 8 O4' G A 624 -98.627 -80.800 66.268 1.00 0.01 O
ATOM 9 C3' G A 624 -100.878 -80.432 66.268 1.00 0.01 C
ATOM 10 O3' G A 624 -102.093 -80.422 65.588 1.00 0.01 O
ATOM 11 C2' G A 624 -100.647 -81.663 67.129 1.00 0.01 C
ATOM 12 O2' G A 624 -100.930 -82.855 66.406 1.00 0.01 O
ATOM 13 C1' G A 624 -99.136 -81.576 67.330 1.00 0.01 C
ATOM 14 N9 G A 624 -98.771 -80.934 68.602 1.00 0.01 N
ATOM 15 C8 G A 624 -98.206 -79.709 68.737 1.00 0.01 C
ATOM 16 N7 G A 624 -97.979 -79.378 69.971 1.00 0.01 N
ATOM 17 C5 G A 624 -98.414 -80.463 70.699 1.00 0.01 C
ATOM 18 C6 G A 624 -98.408 -80.678 72.102 1.00 0.01 C
ATOM 19 O6 G A 624 -98.011 -79.923 73.002 1.00 0.01 O
ATOM 20 N1 G A 624 -98.935 -81.921 72.444 1.00 0.01 N
ATOM 21 C2 G A 624 -99.405 -82.825 71.548 1.00 0.01 C
ATOM 22 N2 G A 624 -99.865 -83.922 72.123 1.00 0.01 N
ATOM 23 N3 G A 624 -99.428 -82.659 70.242 1.00 0.01 N
ATOM 24 C4 G A 624 -98.907 -81.453 69.878 1.00 0.01 C
ATOM 25 P A A 625 -103.331 -79.670 66.239 1.00 0.41 P
ATOM 26 OP1 A A 625 -104.365 -79.516 65.173 1.00 0.41 O
ATOM 27 OP2 A A 625 -102.800 -78.461 66.907 1.00 0.41 O
ATOM 28 O5' A A 625 -103.828 -80.709 67.339 1.00 0.41 O
TER
ATOM 1 O3' G B 624 -102.093 -80.422 65.588 1.00 0.01 O
ATOM 2 P A B 625 -103.331 -79.670 66.239 1.00 0.41 P
ATOM 3 OP1 A B 625 -104.365 -79.516 65.173 1.00 0.41 O
ATOM 4 OP2 A B 625 -102.800 -78.461 66.907 1.00 0.41 O
ATOM 5 O5' A B 625 -103.828 -80.709 67.339 1.00 0.41 O
ATOM 6 C5' A B 625 -104.065 -82.071 66.992 1.00 0.41 C
ATOM 7 C4' A B 625 -104.804 -82.817 68.083 1.00 0.41 C
ATOM 8 O4' A B 625 -103.855 -83.404 69.005 1.00 0.41 O
ATOM 9 C3' A B 625 -105.712 -81.979 68.966 1.00 0.41 C
ATOM 10 O3' A B 625 -106.998 -81.794 68.436 1.00 0.41 O
ATOM 11 C2' A B 625 -105.742 -82.755 70.245 1.00 0.41 C
ATOM 12 O2' A B 625 -106.619 -83.854 70.107 1.00 0.41 O
ATOM 13 C1' A B 625 -104.308 -83.248 70.325 1.00 0.41 C
ATOM 14 N9 A B 625 -103.450 -82.250 70.967 1.00 0.68 N
ATOM 15 C8 A B 625 -102.821 -81.239 70.284 1.00 0.68 C
ATOM 16 N7 A B 625 -102.098 -80.434 71.023 1.00 0.68 N
ATOM 17 C5 A B 625 -102.292 -80.951 72.276 1.00 0.68 C
ATOM 18 C6 A B 625 -101.765 -80.497 73.475 1.00 0.68 C
ATOM 19 N6 A B 625 -100.958 -79.409 73.529 1.00 0.68 N
ATOM 20 N1 A B 625 -102.112 -81.222 74.570 1.00 0.68 N
ATOM 21 C2 A B 625 -102.936 -82.291 74.423 1.00 0.68 C
ATOM 22 N3 A B 625 -103.494 -82.809 73.324 1.00 0.68 N
ATOM 23 C4 A B 625 -103.118 -82.069 72.277 1.00 0.68 C
ATOM 24 P A B 626 -107.880 -80.587 69.001 1.00 5.11 P
ATOM 25 OP1 A B 626 -107.180 -80.043 70.241 1.00 5.11 O
ATOM 26 OP2 A B 626 -109.265 -81.087 69.129 1.00 5.11 O
ATOM 27 O5' A B 626 -107.783 -79.533 67.820 1.00 5.11 O
TER
ATOM 2 P G A 624 -98.249 -76.956 64.831 1.00 0.01 P
ATOM 3 OP1 G A 624 -99.032 -76.625 63.615 1.00 0.01 O
ATOM 4 OP2 G A 624 -98.119 -75.962 65.908 1.00 0.01 O
ATOM 5 O5' G A 624 -98.750 -78.314 65.422 1.00 0.01 O
ATOM 6 C5' G A 624 -99.396 -79.244 64.603 1.00 0.01 C
ATOM 7 C4' G A 624 -99.703 -80.491 65.356 1.00 0.01 C
ATOM 8 O4' G A 624 -98.627 -80.800 66.268 1.00 0.01 O
ATOM 9 C3' G A 624 -100.878 -80.432 66.268 1.00 0.01 C
ATOM 10 O3' G A 624 -102.093 -80.422 65.588 1.00 0.01 O
ATOM 11 C2' G A 624 -100.647 -81.663 67.129 1.00 0.01 C
ATOM 12 O2' G A 624 -100.930 -82.855 66.406 1.00 0.01 O
ATOM 13 C1' G A 624 -99.136 -81.576 67.330 1.00 0.01 C
ATOM 14 N9 G A 624 -98.771 -80.934 68.602 1.00 0.01 N
ATOM 15 C8 G A 624 -98.206 -79.709 68.737 1.00 0.01 C
ATOM 16 N7 G A 624 -97.979 -79.378 69.971 1.00 0.01 N
ATOM 17 C5 G A 624 -98.414 -80.463 70.699 1.00 0.01 C
ATOM 18 C6 G A 624 -98.408 -80.678 72.102 1.00 0.01 C
ATOM 19 O6 G A 624 -98.011 -79.923 73.002 1.00 0.01 O
ATOM 20 N1 G A 624 -98.935 -81.921 72.444 1.00 0.01 N
ATOM 21 C2 G A 624 -99.405 -82.825 71.548 1.00 0.01 C
ATOM 22 N2 G A 624 -99.865 -83.922 72.123 1.00 0.01 N
ATOM 23 N3 G A 624 -99.428 -82.659 70.242 1.00 0.01 N
ATOM 24 C4 G A 624 -98.907 -81.453 69.878 1.00 0.01 C
ATOM 25 P A A 625 -103.331 -79.670 66.239 1.00 0.41 P
ATOM 26 OP1 A A 625 -104.365 -79.516 65.173 1.00 0.41 O
ATOM 27 OP2 A A 625 -102.800 -78.461 66.907 1.00 0.41 O
ATOM 28 O5' A A 625 -103.828 -80.709 67.339 1.00 0.41 O
TER
ATOM 1 O3' G B 624 -102.093 -80.422 65.588 1.00 0.01 O
ATOM 2 P A B 625 -103.331 -79.670 66.239 1.00 0.41 P
ATOM 3 OP1 A B 625 -104.365 -79.516 65.173 1.00 0.41 O
ATOM 4 OP2 A B 625 -102.800 -78.461 66.907 1.00 0.41 O
ATOM 5 O5' A B 625 -103.828 -80.709 67.339 1.00 0.41 O
ATOM 6 C5' A B 625 -104.065 -82.071 66.992 1.00 0.41 C
ATOM 7 C4' A B 625 -104.804 -82.817 68.083 1.00 0.41 C
ATOM 8 O4' A B 625 -103.855 -83.404 69.005 1.00 0.41 O
ATOM 9 C3' A B 625 -105.712 -81.979 68.966 1.00 0.41 C
ATOM 10 O3' A B 625 -106.998 -81.794 68.436 1.00 0.41 O
ATOM 11 C2' A B 625 -105.742 -82.755 70.245 1.00 0.41 C
ATOM 12 O2' A B 625 -106.619 -83.854 70.107 1.00 0.41 O
ATOM 13 C1' A B 625 -104.308 -83.248 70.325 1.00 0.41 C
ATOM 14 N9 A B 625 -103.450 -82.250 70.967 1.00 0.68 N
ATOM 15 C8 A B 625 -102.821 -81.239 70.284 1.00 0.68 C
ATOM 16 N7 A B 625 -102.098 -80.434 71.023 1.00 0.68 N
ATOM 17 C5 A B 625 -102.292 -80.951 72.276 1.00 0.68 C
ATOM 18 C6 A B 625 -101.765 -80.497 73.475 1.00 0.68 C
ATOM 19 N6 A B 625 -100.958 -79.409 73.529 1.00 0.68 N
ATOM 20 N1 A B 625 -102.112 -81.222 74.570 1.00 0.68 N
ATOM 21 C2 A B 625 -102.936 -82.291 74.423 1.00 0.68 C
ATOM 22 N3 A B 625 -103.494 -82.809 73.324 1.00 0.68 N
ATOM 23 C4 A B 625 -103.118 -82.069 72.277 1.00 0.68 C
ATOM 24 P A B 626 -107.880 -80.587 69.001 1.00 5.11 P
ATOM 25 OP1 A B 626 -107.180 -80.043 70.241 1.00 5.11 O
ATOM 26 OP2 A B 626 -109.265 -81.087 69.129 1.00 5.11 O
ATOM 27 O5' A B 626 -107.783 -79.533 67.820 1.00 5.11 O
TER
Atoms:
OP1: (-99.032,-76.625,63.615)
OP2: (-98.119,-75.962,65.908)
C3': (-100.878,-80.432,66.268)
C1': (-99.136,-81.576,67.330)
C5': (-99.396,-79.244,64.603)
O6: (-98.011,-79.923,73.002)
O4': (-98.627,-80.800,66.268)
C8: (-98.206,-79.709,68.737)
C2: (-99.405,-82.825,71.548)
C6: (-98.408,-80.678,72.102)
C5: (-98.414,-80.463,70.699)
C4: (-98.907,-81.453,69.878)
P: (-98.249,-76.956,64.831)
C4': (-99.703,-80.491,65.356)
C2': (-100.647,-81.663,67.129)
O2': (-100.930,-82.855,66.406)
N1: (-98.935,-81.921,72.444)
N2: (-99.865,-83.922,72.123)
N3: (-99.428,-82.659,70.242)
N7: (-97.979,-79.378,69.971)
N9: (-98.771,-80.934,68.602)
O5': (-98.750,-78.314,65.422)
O3': (-102.093,-80.422,65.588)
OP2: (-98.119,-75.962,65.908)
C3': (-100.878,-80.432,66.268)
C1': (-99.136,-81.576,67.330)
C5': (-99.396,-79.244,64.603)
O6: (-98.011,-79.923,73.002)
O4': (-98.627,-80.800,66.268)
C8: (-98.206,-79.709,68.737)
C2: (-99.405,-82.825,71.548)
C6: (-98.408,-80.678,72.102)
C5: (-98.414,-80.463,70.699)
C4: (-98.907,-81.453,69.878)
P: (-98.249,-76.956,64.831)
C4': (-99.703,-80.491,65.356)
C2': (-100.647,-81.663,67.129)
O2': (-100.930,-82.855,66.406)
N1: (-98.935,-81.921,72.444)
N2: (-99.865,-83.922,72.123)
N3: (-99.428,-82.659,70.242)
N7: (-97.979,-79.378,69.971)
N9: (-98.771,-80.934,68.602)
O5': (-98.750,-78.314,65.422)
O3': (-102.093,-80.422,65.588)
OP1: (-104.365,-79.516,65.173)
OP2: (-102.800,-78.461,66.907)
C3': (-105.712,-81.979,68.966)
C1': (-104.308,-83.248,70.325)
C5': (-104.065,-82.071,66.992)
O4': (-103.855,-83.404,69.005)
C8: (-102.821,-81.239,70.284)
O2': (-106.619,-83.854,70.107)
C6: (-101.765,-80.497,73.475)
C5: (-102.292,-80.951,72.276)
C4: (-103.118,-82.069,72.277)
P: (-103.331,-79.670,66.239)
C4': (-104.804,-82.817,68.083)
C2': (-105.742,-82.755,70.245)
C2: (-102.936,-82.291,74.423)
N1: (-102.112,-81.222,74.570)
N3: (-103.494,-82.809,73.324)
N6: (-100.958,-79.409,73.529)
N7: (-102.098,-80.434,71.023)
N9: (-103.450,-82.250,70.967)
O5': (-103.828,-80.709,67.339)
O3': (-106.998,-81.794,68.436)
OP2: (-102.800,-78.461,66.907)
C3': (-105.712,-81.979,68.966)
C1': (-104.308,-83.248,70.325)
C5': (-104.065,-82.071,66.992)
O4': (-103.855,-83.404,69.005)
C8: (-102.821,-81.239,70.284)
O2': (-106.619,-83.854,70.107)
C6: (-101.765,-80.497,73.475)
C5: (-102.292,-80.951,72.276)
C4: (-103.118,-82.069,72.277)
P: (-103.331,-79.670,66.239)
C4': (-104.804,-82.817,68.083)
C2': (-105.742,-82.755,70.245)
C2: (-102.936,-82.291,74.423)
N1: (-102.112,-81.222,74.570)
N3: (-103.494,-82.809,73.324)
N6: (-100.958,-79.409,73.529)
N7: (-102.098,-80.434,71.023)
N9: (-103.450,-82.250,70.967)
O5': (-103.828,-80.709,67.339)
O3': (-106.998,-81.794,68.436)
Image (generated by PyMOL):