Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1837:1809
Extra
PDB:
ATOM 1 O3' U A 836 4.057 25.598 98.916 1.00 42.21 O
ATOM 2 P C A 837 3.254 26.910 99.310 1.00 47.22 P
ATOM 3 OP1 C A 837 1.918 26.514 99.915 1.00 47.46 O
ATOM 4 OP2 C A 837 3.311 27.671 98.137 1.00 47.17 O
ATOM 5 O5' C A 837 4.147 27.598 100.398 1.00 47.46 O
ATOM 6 C5' C A 837 4.687 26.844 101.459 1.00 47.40 C
ATOM 7 C4' C A 837 5.802 27.589 102.074 1.00 47.55 C
ATOM 8 O4' C A 837 6.837 27.796 101.090 1.00 47.23 O
ATOM 9 C3' C A 837 5.448 28.977 102.563 1.00 48.07 C
ATOM 10 O3' C A 837 4.948 28.916 103.874 1.00 48.42 O
ATOM 11 C2' C A 837 6.784 29.659 102.528 1.00 48.04 C
ATOM 12 O2' C A 837 7.527 29.260 103.661 1.00 48.08 O
ATOM 13 C1' C A 837 7.445 29.035 101.309 1.00 47.51 C
ATOM 14 N1 C A 837 7.286 29.858 100.100 1.00 47.50 N
ATOM 15 C2 C A 837 8.233 30.834 99.780 1.00 47.55 C
ATOM 16 O2 C A 837 9.211 31.046 100.502 1.00 47.62 O
ATOM 17 N3 C A 837 8.051 31.548 98.654 1.00 47.55 N
ATOM 18 C4 C A 837 7.030 31.344 97.854 1.00 47.49 C
ATOM 19 N4 C A 837 6.939 32.092 96.776 1.00 47.51 N
ATOM 20 C5 C A 837 6.075 30.363 98.147 1.00 47.43 C
ATOM 21 C6 C A 837 6.236 29.643 99.261 1.00 47.43 C
ATOM 22 P G A 838 3.480 29.382 104.293 1.00 50.83 P
ATOM 23 OP1 G A 838 2.535 28.939 103.245 1.00 50.63 O
ATOM 24 OP2 G A 838 3.572 30.831 104.644 1.00 51.29 O
ATOM 25 O5' G A 838 3.259 28.526 105.582 1.00 50.94 O
TER
ATOM 1 O3' G B 808 7.464 36.504 94.938 1.00 48.12 O
ATOM 2 P U B 809 8.904 35.755 95.021 1.00 46.11 P
ATOM 3 OP1 U B 809 9.709 36.225 93.847 1.00 45.93 O
ATOM 4 OP2 U B 809 8.658 34.276 95.180 1.00 45.74 O
ATOM 5 O5' U B 809 9.489 36.370 96.368 1.00 46.46 O
ATOM 6 C5' U B 809 10.777 36.053 96.842 1.00 46.27 C
ATOM 7 C4' U B 809 11.196 37.015 97.918 1.00 46.72 C
ATOM 8 O4' U B 809 10.106 37.234 98.853 1.00 47.12 O
ATOM 9 C3' U B 809 12.357 36.579 98.776 1.00 46.60 C
ATOM 10 O3' U B 809 13.582 36.860 98.156 1.00 46.40 O
ATOM 11 C2' U B 809 12.134 37.372 100.054 1.00 47.14 C
ATOM 12 O2' U B 809 12.580 38.704 99.900 1.00 47.47 O
ATOM 13 C1' U B 809 10.613 37.403 100.149 1.00 47.37 C
ATOM 14 N1 U B 809 10.102 36.321 100.982 1.00 47.29 N
ATOM 15 C2 U B 809 10.454 36.321 102.287 1.00 47.53 C
ATOM 16 O2 U B 809 11.133 37.193 102.786 1.00 47.82 O
ATOM 17 N3 U B 809 9.971 35.304 103.023 1.00 47.45 N
ATOM 18 C4 U B 809 9.175 34.314 102.599 1.00 47.17 C
ATOM 19 O4 U B 809 8.851 33.460 103.412 1.00 47.15 O
ATOM 20 C5 U B 809 8.860 34.365 101.224 1.00 46.93 C
ATOM 21 C6 U B 809 9.312 35.349 100.472 1.00 46.99 C
ATOM 22 P A B 810 14.687 35.727 97.980 1.00 46.99 P
ATOM 23 OP1 A B 810 15.839 36.343 97.289 1.00 46.91 O
ATOM 24 OP2 A B 810 14.050 34.552 97.349 1.00 46.60 O
ATOM 25 O5' A B 810 15.068 35.406 99.488 1.00 47.16 O
TER
ATOM 2 P C A 837 3.254 26.910 99.310 1.00 47.22 P
ATOM 3 OP1 C A 837 1.918 26.514 99.915 1.00 47.46 O
ATOM 4 OP2 C A 837 3.311 27.671 98.137 1.00 47.17 O
ATOM 5 O5' C A 837 4.147 27.598 100.398 1.00 47.46 O
ATOM 6 C5' C A 837 4.687 26.844 101.459 1.00 47.40 C
ATOM 7 C4' C A 837 5.802 27.589 102.074 1.00 47.55 C
ATOM 8 O4' C A 837 6.837 27.796 101.090 1.00 47.23 O
ATOM 9 C3' C A 837 5.448 28.977 102.563 1.00 48.07 C
ATOM 10 O3' C A 837 4.948 28.916 103.874 1.00 48.42 O
ATOM 11 C2' C A 837 6.784 29.659 102.528 1.00 48.04 C
ATOM 12 O2' C A 837 7.527 29.260 103.661 1.00 48.08 O
ATOM 13 C1' C A 837 7.445 29.035 101.309 1.00 47.51 C
ATOM 14 N1 C A 837 7.286 29.858 100.100 1.00 47.50 N
ATOM 15 C2 C A 837 8.233 30.834 99.780 1.00 47.55 C
ATOM 16 O2 C A 837 9.211 31.046 100.502 1.00 47.62 O
ATOM 17 N3 C A 837 8.051 31.548 98.654 1.00 47.55 N
ATOM 18 C4 C A 837 7.030 31.344 97.854 1.00 47.49 C
ATOM 19 N4 C A 837 6.939 32.092 96.776 1.00 47.51 N
ATOM 20 C5 C A 837 6.075 30.363 98.147 1.00 47.43 C
ATOM 21 C6 C A 837 6.236 29.643 99.261 1.00 47.43 C
ATOM 22 P G A 838 3.480 29.382 104.293 1.00 50.83 P
ATOM 23 OP1 G A 838 2.535 28.939 103.245 1.00 50.63 O
ATOM 24 OP2 G A 838 3.572 30.831 104.644 1.00 51.29 O
ATOM 25 O5' G A 838 3.259 28.526 105.582 1.00 50.94 O
TER
ATOM 1 O3' G B 808 7.464 36.504 94.938 1.00 48.12 O
ATOM 2 P U B 809 8.904 35.755 95.021 1.00 46.11 P
ATOM 3 OP1 U B 809 9.709 36.225 93.847 1.00 45.93 O
ATOM 4 OP2 U B 809 8.658 34.276 95.180 1.00 45.74 O
ATOM 5 O5' U B 809 9.489 36.370 96.368 1.00 46.46 O
ATOM 6 C5' U B 809 10.777 36.053 96.842 1.00 46.27 C
ATOM 7 C4' U B 809 11.196 37.015 97.918 1.00 46.72 C
ATOM 8 O4' U B 809 10.106 37.234 98.853 1.00 47.12 O
ATOM 9 C3' U B 809 12.357 36.579 98.776 1.00 46.60 C
ATOM 10 O3' U B 809 13.582 36.860 98.156 1.00 46.40 O
ATOM 11 C2' U B 809 12.134 37.372 100.054 1.00 47.14 C
ATOM 12 O2' U B 809 12.580 38.704 99.900 1.00 47.47 O
ATOM 13 C1' U B 809 10.613 37.403 100.149 1.00 47.37 C
ATOM 14 N1 U B 809 10.102 36.321 100.982 1.00 47.29 N
ATOM 15 C2 U B 809 10.454 36.321 102.287 1.00 47.53 C
ATOM 16 O2 U B 809 11.133 37.193 102.786 1.00 47.82 O
ATOM 17 N3 U B 809 9.971 35.304 103.023 1.00 47.45 N
ATOM 18 C4 U B 809 9.175 34.314 102.599 1.00 47.17 C
ATOM 19 O4 U B 809 8.851 33.460 103.412 1.00 47.15 O
ATOM 20 C5 U B 809 8.860 34.365 101.224 1.00 46.93 C
ATOM 21 C6 U B 809 9.312 35.349 100.472 1.00 46.99 C
ATOM 22 P A B 810 14.687 35.727 97.980 1.00 46.99 P
ATOM 23 OP1 A B 810 15.839 36.343 97.289 1.00 46.91 O
ATOM 24 OP2 A B 810 14.050 34.552 97.349 1.00 46.60 O
ATOM 25 O5' A B 810 15.068 35.406 99.488 1.00 47.16 O
TER
Atoms:
C2: (8.233,30.834,99.780)
OP1: (1.918,26.514,99.915)
OP2: (3.311,27.671,98.137)
C4: (7.030,31.344,97.854)
O5': (4.147,27.598,100.398)
C3': (5.448,28.977,102.563)
C1': (7.445,29.035,101.309)
O4': (6.837,27.796,101.090)
C5': (4.687,26.844,101.459)
P: (3.254,26.910,99.310)
O2: (9.211,31.046,100.502)
C4': (5.802,27.589,102.074)
C2': (6.784,29.659,102.528)
O2': (7.527,29.260,103.661)
N1: (7.286,29.858,100.100)
N3: (8.051,31.548,98.654)
N4: (6.939,32.092,96.776)
C6: (6.236,29.643,99.261)
C5: (6.075,30.363,98.147)
O3': (4.948,28.916,103.874)
OP1: (1.918,26.514,99.915)
OP2: (3.311,27.671,98.137)
C4: (7.030,31.344,97.854)
O5': (4.147,27.598,100.398)
C3': (5.448,28.977,102.563)
C1': (7.445,29.035,101.309)
O4': (6.837,27.796,101.090)
C5': (4.687,26.844,101.459)
P: (3.254,26.910,99.310)
O2: (9.211,31.046,100.502)
C4': (5.802,27.589,102.074)
C2': (6.784,29.659,102.528)
O2': (7.527,29.260,103.661)
N1: (7.286,29.858,100.100)
N3: (8.051,31.548,98.654)
N4: (6.939,32.092,96.776)
C6: (6.236,29.643,99.261)
C5: (6.075,30.363,98.147)
O3': (4.948,28.916,103.874)
C4: (9.175,34.314,102.599)
N3: (9.971,35.304,103.023)
OP1: (9.709,36.225,93.847)
OP2: (8.658,34.276,95.180)
C2: (10.454,36.321,102.287)
C1': (10.613,37.403,100.149)
C3': (12.357,36.579,98.776)
O5': (9.489,36.370,96.368)
O4': (10.106,37.234,98.853)
C5': (10.777,36.053,96.842)
P: (8.904,35.755,95.021)
C4': (11.196,37.015,97.918)
C2': (12.134,37.372,100.054)
O2': (12.580,38.704,99.900)
N1: (10.102,36.321,100.982)
O4: (8.851,33.460,103.412)
O2: (11.133,37.193,102.786)
C6: (9.312,35.349,100.472)
C5: (8.860,34.365,101.224)
O3': (13.582,36.860,98.156)
N3: (9.971,35.304,103.023)
OP1: (9.709,36.225,93.847)
OP2: (8.658,34.276,95.180)
C2: (10.454,36.321,102.287)
C1': (10.613,37.403,100.149)
C3': (12.357,36.579,98.776)
O5': (9.489,36.370,96.368)
O4': (10.106,37.234,98.853)
C5': (10.777,36.053,96.842)
P: (8.904,35.755,95.021)
C4': (11.196,37.015,97.918)
C2': (12.134,37.372,100.054)
O2': (12.580,38.704,99.900)
N1: (10.102,36.321,100.982)
O4: (8.851,33.460,103.412)
O2: (11.133,37.193,102.786)
C6: (9.312,35.349,100.472)
C5: (8.860,34.365,101.224)
O3': (13.582,36.860,98.156)
Image (generated by PyMOL):