Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2620:A2630
Extra
PDB:
ATOM 1 O3' C A2619 44.370 112.701 168.522 1.00 48.67 O
ATOM 2 P U A2620 44.057 111.213 169.026 1.00 48.86 P
ATOM 3 OP1 U A2620 44.040 111.299 170.497 1.00 50.19 O
ATOM 4 OP2 U A2620 44.952 110.230 168.359 1.00 48.50 O
ATOM 5 O5' U A2620 42.565 110.956 168.542 1.00 46.96 O
ATOM 6 C5' U A2620 41.472 111.641 169.171 1.00 46.54 C
ATOM 7 C4' U A2620 40.221 111.476 168.361 1.00 45.44 C
ATOM 8 O4' U A2620 40.440 112.059 167.050 1.00 45.34 O
ATOM 9 C3' U A2620 39.851 110.040 168.057 1.00 45.45 C
ATOM 10 O3' U A2620 39.186 109.370 169.126 1.00 45.23 O
ATOM 11 C2' U A2620 39.012 110.177 166.794 1.00 45.35 C
ATOM 12 O2' U A2620 37.670 110.523 167.022 1.00 45.02 O
ATOM 13 C1' U A2620 39.738 111.313 166.071 1.00 44.51 C
ATOM 14 N1 U A2620 40.691 110.792 165.081 1.00 44.39 N
ATOM 15 C2 U A2620 40.162 110.319 163.894 1.00 44.42 C
ATOM 16 O2 U A2620 38.974 110.398 163.617 1.00 45.11 O
ATOM 17 N3 U A2620 41.073 109.758 163.040 1.00 45.02 N
ATOM 18 C4 U A2620 42.438 109.651 163.230 1.00 45.72 C
ATOM 19 O4 U A2620 43.122 109.093 162.368 1.00 45.64 O
ATOM 20 C5 U A2620 42.918 110.206 164.464 1.00 44.56 C
ATOM 21 C6 U A2620 42.051 110.740 165.325 1.00 43.57 C
ATOM 22 P G A2621 39.280 107.765 169.225 1.00 45.81 P
ATOM 23 OP1 G A2621 38.222 107.251 170.132 1.00 45.40 O
ATOM 24 OP2 G A2621 40.689 107.381 169.457 1.00 45.28 O
ATOM 25 O5' G A2621 38.907 107.301 167.753 1.00 46.22 O
TER
ATOM 1 O3' C B2629 45.275 106.933 159.623 1.00 41.99 O
ATOM 2 P U B2630 45.480 105.598 158.742 1.00 43.40 P
ATOM 3 OP1 U B2630 44.536 104.595 159.260 1.00 44.39 O
ATOM 4 OP2 U B2630 46.910 105.243 158.569 1.00 42.70 O
ATOM 5 O5' U B2630 44.920 105.994 157.316 1.00 44.31 O
ATOM 6 C5' U B2630 44.655 104.997 156.316 1.00 47.12 C
ATOM 7 C4' U B2630 43.644 105.538 155.340 1.00 48.42 C
ATOM 8 O4' U B2630 42.442 105.835 156.092 1.00 47.41 O
ATOM 9 C3' U B2630 44.058 106.854 154.663 1.00 48.11 C
ATOM 10 O3' U B2630 43.391 107.062 153.418 1.00 48.20 O
ATOM 11 C2' U B2630 43.493 107.885 155.619 1.00 48.77 C
ATOM 12 O2' U B2630 43.219 109.099 154.969 1.00 50.54 O
ATOM 13 C1' U B2630 42.187 107.212 156.012 1.00 48.85 C
ATOM 14 N1 U B2630 41.613 107.657 157.279 1.00 49.28 N
ATOM 15 C2 U B2630 40.253 107.774 157.314 1.00 49.63 C
ATOM 16 O2 U B2630 39.545 107.514 156.355 1.00 50.70 O
ATOM 17 N3 U B2630 39.741 108.209 158.507 1.00 48.99 N
ATOM 18 C4 U B2630 40.443 108.527 159.640 1.00 48.30 C
ATOM 19 O4 U B2630 39.828 108.846 160.653 1.00 46.21 O
ATOM 20 C5 U B2630 41.862 108.379 159.526 1.00 48.32 C
ATOM 21 C6 U B2630 42.385 107.953 158.379 1.00 48.76 C
ATOM 22 P A B2631 43.236 105.852 152.383 1.00 48.90 P
ATOM 23 OP1 A B2631 44.431 104.989 152.590 1.00 46.55 O
ATOM 24 OP2 A B2631 42.926 106.364 151.037 1.00 47.55 O
ATOM 25 O5' A B2631 41.950 105.074 152.917 1.00 49.33 O
TER
ATOM 2 P U A2620 44.057 111.213 169.026 1.00 48.86 P
ATOM 3 OP1 U A2620 44.040 111.299 170.497 1.00 50.19 O
ATOM 4 OP2 U A2620 44.952 110.230 168.359 1.00 48.50 O
ATOM 5 O5' U A2620 42.565 110.956 168.542 1.00 46.96 O
ATOM 6 C5' U A2620 41.472 111.641 169.171 1.00 46.54 C
ATOM 7 C4' U A2620 40.221 111.476 168.361 1.00 45.44 C
ATOM 8 O4' U A2620 40.440 112.059 167.050 1.00 45.34 O
ATOM 9 C3' U A2620 39.851 110.040 168.057 1.00 45.45 C
ATOM 10 O3' U A2620 39.186 109.370 169.126 1.00 45.23 O
ATOM 11 C2' U A2620 39.012 110.177 166.794 1.00 45.35 C
ATOM 12 O2' U A2620 37.670 110.523 167.022 1.00 45.02 O
ATOM 13 C1' U A2620 39.738 111.313 166.071 1.00 44.51 C
ATOM 14 N1 U A2620 40.691 110.792 165.081 1.00 44.39 N
ATOM 15 C2 U A2620 40.162 110.319 163.894 1.00 44.42 C
ATOM 16 O2 U A2620 38.974 110.398 163.617 1.00 45.11 O
ATOM 17 N3 U A2620 41.073 109.758 163.040 1.00 45.02 N
ATOM 18 C4 U A2620 42.438 109.651 163.230 1.00 45.72 C
ATOM 19 O4 U A2620 43.122 109.093 162.368 1.00 45.64 O
ATOM 20 C5 U A2620 42.918 110.206 164.464 1.00 44.56 C
ATOM 21 C6 U A2620 42.051 110.740 165.325 1.00 43.57 C
ATOM 22 P G A2621 39.280 107.765 169.225 1.00 45.81 P
ATOM 23 OP1 G A2621 38.222 107.251 170.132 1.00 45.40 O
ATOM 24 OP2 G A2621 40.689 107.381 169.457 1.00 45.28 O
ATOM 25 O5' G A2621 38.907 107.301 167.753 1.00 46.22 O
TER
ATOM 1 O3' C B2629 45.275 106.933 159.623 1.00 41.99 O
ATOM 2 P U B2630 45.480 105.598 158.742 1.00 43.40 P
ATOM 3 OP1 U B2630 44.536 104.595 159.260 1.00 44.39 O
ATOM 4 OP2 U B2630 46.910 105.243 158.569 1.00 42.70 O
ATOM 5 O5' U B2630 44.920 105.994 157.316 1.00 44.31 O
ATOM 6 C5' U B2630 44.655 104.997 156.316 1.00 47.12 C
ATOM 7 C4' U B2630 43.644 105.538 155.340 1.00 48.42 C
ATOM 8 O4' U B2630 42.442 105.835 156.092 1.00 47.41 O
ATOM 9 C3' U B2630 44.058 106.854 154.663 1.00 48.11 C
ATOM 10 O3' U B2630 43.391 107.062 153.418 1.00 48.20 O
ATOM 11 C2' U B2630 43.493 107.885 155.619 1.00 48.77 C
ATOM 12 O2' U B2630 43.219 109.099 154.969 1.00 50.54 O
ATOM 13 C1' U B2630 42.187 107.212 156.012 1.00 48.85 C
ATOM 14 N1 U B2630 41.613 107.657 157.279 1.00 49.28 N
ATOM 15 C2 U B2630 40.253 107.774 157.314 1.00 49.63 C
ATOM 16 O2 U B2630 39.545 107.514 156.355 1.00 50.70 O
ATOM 17 N3 U B2630 39.741 108.209 158.507 1.00 48.99 N
ATOM 18 C4 U B2630 40.443 108.527 159.640 1.00 48.30 C
ATOM 19 O4 U B2630 39.828 108.846 160.653 1.00 46.21 O
ATOM 20 C5 U B2630 41.862 108.379 159.526 1.00 48.32 C
ATOM 21 C6 U B2630 42.385 107.953 158.379 1.00 48.76 C
ATOM 22 P A B2631 43.236 105.852 152.383 1.00 48.90 P
ATOM 23 OP1 A B2631 44.431 104.989 152.590 1.00 46.55 O
ATOM 24 OP2 A B2631 42.926 106.364 151.037 1.00 47.55 O
ATOM 25 O5' A B2631 41.950 105.074 152.917 1.00 49.33 O
TER
Atoms:
C4: (42.438,109.651,163.230)
N3: (41.073,109.758,163.040)
OP1: (44.040,111.299,170.497)
OP2: (44.952,110.230,168.359)
C2: (40.162,110.319,163.894)
C1': (39.738,111.313,166.071)
C3': (39.851,110.040,168.057)
O5': (42.565,110.956,168.542)
O4': (40.440,112.059,167.050)
C5': (41.472,111.641,169.171)
P: (44.057,111.213,169.026)
C4': (40.221,111.476,168.361)
C2': (39.012,110.177,166.794)
O2': (37.670,110.523,167.022)
N1: (40.691,110.792,165.081)
O4: (43.122,109.093,162.368)
O2: (38.974,110.398,163.617)
C6: (42.051,110.740,165.325)
C5: (42.918,110.206,164.464)
O3': (39.186,109.370,169.126)
N3: (41.073,109.758,163.040)
OP1: (44.040,111.299,170.497)
OP2: (44.952,110.230,168.359)
C2: (40.162,110.319,163.894)
C1': (39.738,111.313,166.071)
C3': (39.851,110.040,168.057)
O5': (42.565,110.956,168.542)
O4': (40.440,112.059,167.050)
C5': (41.472,111.641,169.171)
P: (44.057,111.213,169.026)
C4': (40.221,111.476,168.361)
C2': (39.012,110.177,166.794)
O2': (37.670,110.523,167.022)
N1: (40.691,110.792,165.081)
O4: (43.122,109.093,162.368)
O2: (38.974,110.398,163.617)
C6: (42.051,110.740,165.325)
C5: (42.918,110.206,164.464)
O3': (39.186,109.370,169.126)
C4: (40.443,108.527,159.640)
N3: (39.741,108.209,158.507)
OP1: (44.536,104.595,159.260)
OP2: (46.910,105.243,158.569)
C2: (40.253,107.774,157.314)
C1': (42.187,107.212,156.012)
C3': (44.058,106.854,154.663)
O5': (44.920,105.994,157.316)
O4': (42.442,105.835,156.092)
C5': (44.655,104.997,156.316)
P: (45.480,105.598,158.742)
C4': (43.644,105.538,155.340)
C2': (43.493,107.885,155.619)
O2': (43.219,109.099,154.969)
N1: (41.613,107.657,157.279)
O4: (39.828,108.846,160.653)
O2: (39.545,107.514,156.355)
C6: (42.385,107.953,158.379)
C5: (41.862,108.379,159.526)
O3': (43.391,107.062,153.418)
N3: (39.741,108.209,158.507)
OP1: (44.536,104.595,159.260)
OP2: (46.910,105.243,158.569)
C2: (40.253,107.774,157.314)
C1': (42.187,107.212,156.012)
C3': (44.058,106.854,154.663)
O5': (44.920,105.994,157.316)
O4': (42.442,105.835,156.092)
C5': (44.655,104.997,156.316)
P: (45.480,105.598,158.742)
C4': (43.644,105.538,155.340)
C2': (43.493,107.885,155.619)
O2': (43.219,109.099,154.969)
N1: (41.613,107.657,157.279)
O4: (39.828,108.846,160.653)
O2: (39.545,107.514,156.355)
C6: (42.385,107.953,158.379)
C5: (41.862,108.379,159.526)
O3': (43.391,107.062,153.418)
Image (generated by PyMOL):