ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:02040:02041

Extra

PDB:
ATOM 1 O3' G A2039 55.296 131.569 109.562 1.00 24.64 O
ATOM 2 P G A2040 55.366 131.146 108.025 1.00 25.99 P
ATOM 3 OP1 G A2040 56.352 130.042 107.934 1.00 24.11 O
ATOM 4 OP2 G A2040 55.557 132.367 107.209 1.00 24.30 O
ATOM 5 O5' G A2040 53.903 130.601 107.715 1.00 25.11 O
ATOM 6 C5' G A2040 53.401 129.420 108.356 1.00 25.25 C
ATOM 7 C4' G A2040 51.977 129.172 107.936 1.00 26.49 C
ATOM 8 O4' G A2040 51.160 130.298 108.354 1.00 27.58 O
ATOM 9 C3' G A2040 51.728 129.100 106.439 1.00 27.74 C
ATOM 10 O3' G A2040 52.065 127.839 105.880 1.00 28.37 O
ATOM 11 C2' G A2040 50.242 129.417 106.354 1.00 27.75 C
ATOM 12 O2' G A2040 49.410 128.331 106.719 1.00 27.50 O
ATOM 13 C1' G A2040 50.125 130.522 107.404 1.00 27.93 C
ATOM 14 N9 G A2040 50.305 131.849 106.817 1.00 28.87 N
ATOM 15 C8 G A2040 51.370 132.702 106.981 1.00 29.37 C
ATOM 16 N7 G A2040 51.253 133.805 106.292 1.00 30.37 N
ATOM 17 C5 G A2040 50.035 133.676 105.639 1.00 31.45 C
ATOM 18 C6 G A2040 49.366 134.558 104.733 1.00 31.94 C
ATOM 19 O6 G A2040 49.729 135.663 104.315 1.00 33.11 O
ATOM 20 N1 G A2040 48.155 134.030 104.310 1.00 31.44 N
ATOM 21 C2 G A2040 47.644 132.820 104.701 1.00 33.32 C
ATOM 22 N2 G A2040 46.454 132.492 104.184 1.00 34.73 N
ATOM 23 N3 G A2040 48.250 131.992 105.539 1.00 32.81 N
ATOM 24 C4 G A2040 49.433 132.480 105.964 1.00 30.99 C
ATOM 25 P A A2041 52.575 127.756 104.355 1.00 28.46 P
ATOM 26 OP1 A A2041 53.032 126.361 104.154 1.00 26.57 O
ATOM 27 OP2 A A2041 53.513 128.878 104.103 1.00 29.49 O
ATOM 28 O5' A A2041 51.265 128.014 103.489 1.00 25.41 O
TER

ATOM 1 O3' G B2040 52.065 127.839 105.880 1.00 28.37 O
ATOM 2 P A B2041 52.575 127.756 104.355 1.00 28.46 P
ATOM 3 OP1 A B2041 53.032 126.361 104.154 1.00 26.57 O
ATOM 4 OP2 A B2041 53.513 128.878 104.103 1.00 29.49 O
ATOM 5 O5' A B2041 51.265 128.014 103.489 1.00 25.41 O
ATOM 6 C5' A B2041 50.124 127.160 103.632 1.00 28.29 C
ATOM 7 C4' A B2041 48.925 127.736 102.915 1.00 29.87 C
ATOM 8 O4' A B2041 48.685 129.086 103.382 1.00 30.67 O
ATOM 9 C3' A B2041 49.002 127.894 101.404 1.00 29.27 C
ATOM 10 O3' A B2041 48.699 126.675 100.742 1.00 29.01 O
ATOM 11 C2' A B2041 47.884 128.892 101.154 1.00 31.32 C
ATOM 12 O2' A B2041 46.618 128.263 101.223 1.00 34.79 O
ATOM 13 C1' A B2041 48.033 129.824 102.361 1.00 31.86 C
ATOM 14 N9 A B2041 48.805 131.037 102.079 1.00 32.43 N
ATOM 15 C8 A B2041 50.108 131.328 102.415 1.00 33.29 C
ATOM 16 N7 A B2041 50.510 132.505 102.001 1.00 32.02 N
ATOM 17 C5 A B2041 49.401 133.024 101.350 1.00 32.25 C
ATOM 18 C6 A B2041 49.183 134.237 100.687 1.00 32.63 C
ATOM 19 N6 A B2041 50.112 135.187 100.563 1.00 31.16 N
ATOM 20 N1 A B2041 47.960 134.445 100.145 1.00 33.23 N
ATOM 21 C2 A B2041 47.032 133.491 100.272 1.00 30.91 C
ATOM 22 N3 A B2041 47.118 132.311 100.871 1.00 29.93 N
ATOM 23 C4 A B2041 48.343 132.135 101.395 1.00 31.70 C
ATOM 24 P A B2042 49.521 126.247 99.435 1.00 28.93 P
ATOM 25 OP1 A B2042 49.562 127.407 98.515 1.00 30.84 O
ATOM 26 OP2 A B2042 48.954 124.969 98.960 1.00 30.11 O
ATOM 27 O5' A B2042 50.983 125.950 99.989 1.00 27.32 O
TER

Atoms:
OP1: (56.352,130.042,107.934)
OP2: (55.557,132.367,107.209)
C3': (51.728,129.100,106.439)
C1': (50.125,130.522,107.404)
C5': (53.401,129.420,108.356)
O6: (49.729,135.663,104.315)
O4': (51.160,130.298,108.354)
C8: (51.370,132.702,106.981)
C2: (47.644,132.820,104.701)
C6: (49.366,134.558,104.733)
C5: (50.035,133.676,105.639)
C4: (49.433,132.480,105.964)
P: (55.366,131.146,108.025)
C4': (51.977,129.172,107.936)
C2': (50.242,129.417,106.354)
O2': (49.410,128.331,106.719)
N1: (48.155,134.030,104.310)
N2: (46.454,132.492,104.184)
N3: (48.250,131.992,105.539)
N7: (51.253,133.805,106.292)
N9: (50.305,131.849,106.817)
O5': (53.903,130.601,107.715)
O3': (52.065,127.839,105.880)
OP1: (53.032,126.361,104.154)
OP2: (53.513,128.878,104.103)
C3': (49.002,127.894,101.404)
C1': (48.033,129.824,102.361)
C5': (50.124,127.160,103.632)
O4': (48.685,129.086,103.382)
C8: (50.108,131.328,102.415)
O2': (46.618,128.263,101.223)
C6: (49.183,134.237,100.687)
C5: (49.401,133.024,101.350)
C4: (48.343,132.135,101.395)
P: (52.575,127.756,104.355)
C4': (48.925,127.736,102.915)
C2': (47.884,128.892,101.154)
C2: (47.032,133.491,100.272)
N1: (47.960,134.445,100.145)
N3: (47.118,132.311,100.871)
N6: (50.112,135.187,100.563)
N7: (50.510,132.505,102.001)
N9: (48.805,131.037,102.079)
O5': (51.265,128.014,103.489)
O3': (48.699,126.675,100.742)
Image (generated by PyMOL):
PyMOL image
show in jmol