Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCQ:0562:0563
Extra
PDB:
ATOM 1 O3' A A 561 -13.090 88.241 129.750 1.00 94.16 O
ATOM 2 P G A 562 -12.085 87.731 130.903 1.00 94.59 P
ATOM 3 OP1 G A 562 -12.907 87.220 132.024 1.00 95.17 O
ATOM 4 OP2 G A 562 -11.081 88.798 131.159 1.00 95.49 O
ATOM 5 O5' G A 562 -11.345 86.488 130.240 1.00 91.58 O
ATOM 6 C5' G A 562 -12.078 85.306 129.896 1.00 89.46 C
ATOM 7 C4' G A 562 -11.158 84.278 129.293 1.00 88.24 C
ATOM 8 O4' G A 562 -10.688 84.735 127.998 1.00 88.32 O
ATOM 9 C3' G A 562 -9.868 84.038 130.049 1.00 87.80 C
ATOM 10 O3' G A 562 -10.019 83.242 131.202 1.00 89.77 O
ATOM 11 C2' G A 562 -9.007 83.394 128.979 1.00 87.04 C
ATOM 12 O2' G A 562 -9.352 82.053 128.718 1.00 85.74 O
ATOM 13 C1' G A 562 -9.360 84.272 127.782 1.00 87.79 C
ATOM 14 N9 G A 562 -8.460 85.421 127.774 1.00 88.56 N
ATOM 15 C8 G A 562 -8.659 86.651 128.361 1.00 88.37 C
ATOM 16 N7 G A 562 -7.627 87.443 128.250 1.00 88.05 N
ATOM 17 C5 G A 562 -6.700 86.698 127.531 1.00 88.45 C
ATOM 18 C6 G A 562 -5.385 87.021 127.111 1.00 88.10 C
ATOM 19 O6 G A 562 -4.752 88.062 127.301 1.00 89.24 O
ATOM 20 N1 G A 562 -4.803 85.976 126.406 1.00 87.35 N
ATOM 21 C2 G A 562 -5.404 84.774 126.139 1.00 88.07 C
ATOM 22 N2 G A 562 -4.684 83.891 125.440 1.00 89.04 N
ATOM 23 N3 G A 562 -6.623 84.457 126.527 1.00 88.25 N
ATOM 24 C4 G A 562 -7.209 85.458 127.214 1.00 88.40 C
ATOM 25 P A A 563 -8.978 83.417 132.411 1.00 91.12 P
ATOM 26 OP1 A A 563 -9.419 82.515 133.501 1.00 92.86 O
ATOM 27 OP2 A A 563 -8.797 84.868 132.685 1.00 90.49 O
ATOM 28 O5' A A 563 -7.627 82.827 131.814 1.00 89.78 O
TER
ATOM 1 O3' G B 562 -10.019 83.242 131.202 1.00 89.77 O
ATOM 2 P A B 563 -8.978 83.417 132.411 1.00 91.12 P
ATOM 3 OP1 A B 563 -9.419 82.515 133.501 1.00 92.86 O
ATOM 4 OP2 A B 563 -8.797 84.868 132.685 1.00 90.49 O
ATOM 5 O5' A B 563 -7.627 82.827 131.814 1.00 89.78 O
ATOM 6 C5' A B 563 -7.607 81.505 131.258 1.00 89.66 C
ATOM 7 C4' A B 563 -6.272 81.222 130.620 1.00 89.54 C
ATOM 8 O4' A B 563 -6.068 82.095 129.474 1.00 89.84 O
ATOM 9 C3' A B 563 -5.051 81.502 131.473 1.00 89.11 C
ATOM 10 O3' A B 563 -4.810 80.511 132.458 1.00 88.46 O
ATOM 11 C2' A B 563 -3.963 81.564 130.412 1.00 88.99 C
ATOM 12 O2' A B 563 -3.628 80.284 129.910 1.00 88.33 O
ATOM 13 C1' A B 563 -4.678 82.362 129.323 1.00 88.51 C
ATOM 14 N9 A B 563 -4.453 83.799 129.501 1.00 87.26 N
ATOM 15 C8 A B 563 -5.302 84.737 130.039 1.00 86.61 C
ATOM 16 N7 A B 563 -4.790 85.944 130.099 1.00 85.60 N
ATOM 17 C5 A B 563 -3.520 85.794 129.557 1.00 86.11 C
ATOM 18 C6 A B 563 -2.468 86.702 129.350 1.00 85.50 C
ATOM 19 N6 A B 563 -2.532 87.993 129.676 1.00 85.24 N
ATOM 20 N1 A B 563 -1.332 86.230 128.792 1.00 84.63 N
ATOM 21 C2 A B 563 -1.266 84.931 128.470 1.00 84.89 C
ATOM 22 N3 A B 563 -2.184 83.978 128.617 1.00 85.56 N
ATOM 23 C4 A B 563 -3.302 84.480 129.175 1.00 86.85 C
ATOM 24 P C B 564 -3.765 80.819 133.638 1.00 87.26 P
ATOM 25 OP1 C B 564 -3.731 79.648 134.551 1.00 88.07 O
ATOM 26 OP2 C B 564 -4.042 82.178 134.186 1.00 85.38 O
ATOM 27 O5' C B 564 -2.375 80.856 132.871 1.00 85.81 O
TER
ATOM 2 P G A 562 -12.085 87.731 130.903 1.00 94.59 P
ATOM 3 OP1 G A 562 -12.907 87.220 132.024 1.00 95.17 O
ATOM 4 OP2 G A 562 -11.081 88.798 131.159 1.00 95.49 O
ATOM 5 O5' G A 562 -11.345 86.488 130.240 1.00 91.58 O
ATOM 6 C5' G A 562 -12.078 85.306 129.896 1.00 89.46 C
ATOM 7 C4' G A 562 -11.158 84.278 129.293 1.00 88.24 C
ATOM 8 O4' G A 562 -10.688 84.735 127.998 1.00 88.32 O
ATOM 9 C3' G A 562 -9.868 84.038 130.049 1.00 87.80 C
ATOM 10 O3' G A 562 -10.019 83.242 131.202 1.00 89.77 O
ATOM 11 C2' G A 562 -9.007 83.394 128.979 1.00 87.04 C
ATOM 12 O2' G A 562 -9.352 82.053 128.718 1.00 85.74 O
ATOM 13 C1' G A 562 -9.360 84.272 127.782 1.00 87.79 C
ATOM 14 N9 G A 562 -8.460 85.421 127.774 1.00 88.56 N
ATOM 15 C8 G A 562 -8.659 86.651 128.361 1.00 88.37 C
ATOM 16 N7 G A 562 -7.627 87.443 128.250 1.00 88.05 N
ATOM 17 C5 G A 562 -6.700 86.698 127.531 1.00 88.45 C
ATOM 18 C6 G A 562 -5.385 87.021 127.111 1.00 88.10 C
ATOM 19 O6 G A 562 -4.752 88.062 127.301 1.00 89.24 O
ATOM 20 N1 G A 562 -4.803 85.976 126.406 1.00 87.35 N
ATOM 21 C2 G A 562 -5.404 84.774 126.139 1.00 88.07 C
ATOM 22 N2 G A 562 -4.684 83.891 125.440 1.00 89.04 N
ATOM 23 N3 G A 562 -6.623 84.457 126.527 1.00 88.25 N
ATOM 24 C4 G A 562 -7.209 85.458 127.214 1.00 88.40 C
ATOM 25 P A A 563 -8.978 83.417 132.411 1.00 91.12 P
ATOM 26 OP1 A A 563 -9.419 82.515 133.501 1.00 92.86 O
ATOM 27 OP2 A A 563 -8.797 84.868 132.685 1.00 90.49 O
ATOM 28 O5' A A 563 -7.627 82.827 131.814 1.00 89.78 O
TER
ATOM 1 O3' G B 562 -10.019 83.242 131.202 1.00 89.77 O
ATOM 2 P A B 563 -8.978 83.417 132.411 1.00 91.12 P
ATOM 3 OP1 A B 563 -9.419 82.515 133.501 1.00 92.86 O
ATOM 4 OP2 A B 563 -8.797 84.868 132.685 1.00 90.49 O
ATOM 5 O5' A B 563 -7.627 82.827 131.814 1.00 89.78 O
ATOM 6 C5' A B 563 -7.607 81.505 131.258 1.00 89.66 C
ATOM 7 C4' A B 563 -6.272 81.222 130.620 1.00 89.54 C
ATOM 8 O4' A B 563 -6.068 82.095 129.474 1.00 89.84 O
ATOM 9 C3' A B 563 -5.051 81.502 131.473 1.00 89.11 C
ATOM 10 O3' A B 563 -4.810 80.511 132.458 1.00 88.46 O
ATOM 11 C2' A B 563 -3.963 81.564 130.412 1.00 88.99 C
ATOM 12 O2' A B 563 -3.628 80.284 129.910 1.00 88.33 O
ATOM 13 C1' A B 563 -4.678 82.362 129.323 1.00 88.51 C
ATOM 14 N9 A B 563 -4.453 83.799 129.501 1.00 87.26 N
ATOM 15 C8 A B 563 -5.302 84.737 130.039 1.00 86.61 C
ATOM 16 N7 A B 563 -4.790 85.944 130.099 1.00 85.60 N
ATOM 17 C5 A B 563 -3.520 85.794 129.557 1.00 86.11 C
ATOM 18 C6 A B 563 -2.468 86.702 129.350 1.00 85.50 C
ATOM 19 N6 A B 563 -2.532 87.993 129.676 1.00 85.24 N
ATOM 20 N1 A B 563 -1.332 86.230 128.792 1.00 84.63 N
ATOM 21 C2 A B 563 -1.266 84.931 128.470 1.00 84.89 C
ATOM 22 N3 A B 563 -2.184 83.978 128.617 1.00 85.56 N
ATOM 23 C4 A B 563 -3.302 84.480 129.175 1.00 86.85 C
ATOM 24 P C B 564 -3.765 80.819 133.638 1.00 87.26 P
ATOM 25 OP1 C B 564 -3.731 79.648 134.551 1.00 88.07 O
ATOM 26 OP2 C B 564 -4.042 82.178 134.186 1.00 85.38 O
ATOM 27 O5' C B 564 -2.375 80.856 132.871 1.00 85.81 O
TER
Atoms:
OP1: (-12.907,87.220,132.024)
OP2: (-11.081,88.798,131.159)
C3': (-9.868,84.038,130.049)
C1': (-9.360,84.272,127.782)
C5': (-12.078,85.306,129.896)
O6: (-4.752,88.062,127.301)
O4': (-10.688,84.735,127.998)
C8: (-8.659,86.651,128.361)
C2: (-5.404,84.774,126.139)
C6: (-5.385,87.021,127.111)
C5: (-6.700,86.698,127.531)
C4: (-7.209,85.458,127.214)
P: (-12.085,87.731,130.903)
C4': (-11.158,84.278,129.293)
C2': (-9.007,83.394,128.979)
O2': (-9.352,82.053,128.718)
N1: (-4.803,85.976,126.406)
N2: (-4.684,83.891,125.440)
N3: (-6.623,84.457,126.527)
N7: (-7.627,87.443,128.250)
N9: (-8.460,85.421,127.774)
O5': (-11.345,86.488,130.240)
O3': (-10.019,83.242,131.202)
OP2: (-11.081,88.798,131.159)
C3': (-9.868,84.038,130.049)
C1': (-9.360,84.272,127.782)
C5': (-12.078,85.306,129.896)
O6: (-4.752,88.062,127.301)
O4': (-10.688,84.735,127.998)
C8: (-8.659,86.651,128.361)
C2: (-5.404,84.774,126.139)
C6: (-5.385,87.021,127.111)
C5: (-6.700,86.698,127.531)
C4: (-7.209,85.458,127.214)
P: (-12.085,87.731,130.903)
C4': (-11.158,84.278,129.293)
C2': (-9.007,83.394,128.979)
O2': (-9.352,82.053,128.718)
N1: (-4.803,85.976,126.406)
N2: (-4.684,83.891,125.440)
N3: (-6.623,84.457,126.527)
N7: (-7.627,87.443,128.250)
N9: (-8.460,85.421,127.774)
O5': (-11.345,86.488,130.240)
O3': (-10.019,83.242,131.202)
OP1: (-9.419,82.515,133.501)
OP2: (-8.797,84.868,132.685)
C3': (-5.051,81.502,131.473)
C1': (-4.678,82.362,129.323)
C5': (-7.607,81.505,131.258)
O4': (-6.068,82.095,129.474)
C8: (-5.302,84.737,130.039)
O2': (-3.628,80.284,129.910)
C6: (-2.468,86.702,129.350)
C5: (-3.520,85.794,129.557)
C4: (-3.302,84.480,129.175)
P: (-8.978,83.417,132.411)
C4': (-6.272,81.222,130.620)
C2': (-3.963,81.564,130.412)
C2: (-1.266,84.931,128.470)
N1: (-1.332,86.230,128.792)
N3: (-2.184,83.978,128.617)
N6: (-2.532,87.993,129.676)
N7: (-4.790,85.944,130.099)
N9: (-4.453,83.799,129.501)
O5': (-7.627,82.827,131.814)
O3': (-4.810,80.511,132.458)
OP2: (-8.797,84.868,132.685)
C3': (-5.051,81.502,131.473)
C1': (-4.678,82.362,129.323)
C5': (-7.607,81.505,131.258)
O4': (-6.068,82.095,129.474)
C8: (-5.302,84.737,130.039)
O2': (-3.628,80.284,129.910)
C6: (-2.468,86.702,129.350)
C5: (-3.520,85.794,129.557)
C4: (-3.302,84.480,129.175)
P: (-8.978,83.417,132.411)
C4': (-6.272,81.222,130.620)
C2': (-3.963,81.564,130.412)
C2: (-1.266,84.931,128.470)
N1: (-1.332,86.230,128.792)
N3: (-2.184,83.978,128.617)
N6: (-2.532,87.993,129.676)
N7: (-4.790,85.944,130.099)
N9: (-4.453,83.799,129.501)
O5': (-7.627,82.827,131.814)
O3': (-4.810,80.511,132.458)
Image (generated by PyMOL):