Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A225:A399
Extra
PDB:
ATOM 1 O3' U A 224 97.360 -57.710 -71.125 1.00 31.65 O
ATOM 2 P A A 225 97.926 -56.310 -70.601 1.00 42.10 P
ATOM 3 OP1 A A 225 99.330 -56.220 -71.043 1.00 63.74 O
ATOM 4 OP2 A A 225 97.631 -56.238 -69.157 1.00 57.04 O
ATOM 5 O5' A A 225 97.059 -55.237 -71.373 1.00 41.49 O
ATOM 6 C5' A A 225 96.958 -55.247 -72.786 1.00 42.77 C
ATOM 7 C4' A A 225 96.061 -54.131 -73.282 1.00 43.54 C
ATOM 8 O4' A A 225 94.675 -54.477 -73.074 1.00 48.07 O
ATOM 9 C3' A A 225 96.209 -52.796 -72.577 1.00 47.19 C
ATOM 10 O3' A A 225 97.306 -52.044 -73.058 1.00 46.79 O
ATOM 11 C2' A A 225 94.856 -52.120 -72.817 1.00 44.52 C
ATOM 12 O2' A A 225 94.836 -51.444 -74.063 1.00 56.88 O
ATOM 13 C1' A A 225 93.908 -53.306 -72.903 1.00 42.21 C
ATOM 14 N9 A A 225 93.071 -53.443 -71.702 1.00 45.08 N
ATOM 15 C8 A A 225 93.294 -54.231 -70.610 1.00 46.70 C
ATOM 16 N7 A A 225 92.355 -54.130 -69.705 1.00 48.33 N
ATOM 17 C5 A A 225 91.458 -53.230 -70.252 1.00 45.89 C
ATOM 18 C6 A A 225 90.263 -52.726 -69.763 1.00 46.80 C
ATOM 19 N6 A A 225 89.790 -53.105 -68.568 1.00 50.26 N
ATOM 20 N1 A A 225 89.606 -51.839 -70.530 1.00 41.76 N
ATOM 21 C2 A A 225 90.137 -51.497 -71.700 1.00 41.20 C
ATOM 22 N3 A A 225 91.250 -51.914 -72.277 1.00 43.42 N
ATOM 23 C4 A A 225 91.878 -52.793 -71.483 1.00 46.78 C
ATOM 24 P G A 226 98.112 -51.072 -72.075 1.00 37.08 P
ATOM 25 OP1 G A 226 99.245 -50.539 -72.849 1.00 62.27 O
ATOM 26 OP2 G A 226 98.392 -51.832 -70.818 1.00 44.91 O
ATOM 27 O5' G A 226 97.069 -49.917 -71.794 1.00 34.85 O
TER
ATOM 1 O3' U B 398 82.620 -49.245 -69.881 1.00 48.04 O
ATOM 2 P U B 399 82.951 -50.405 -68.833 1.00 37.81 P
ATOM 3 OP1 U B 399 82.776 -51.702 -69.529 1.00 35.77 O
ATOM 4 OP2 U B 399 82.149 -50.132 -67.603 1.00 55.47 O
ATOM 5 O5' U B 399 84.488 -50.160 -68.530 1.00 61.47 O
ATOM 6 C5' U B 399 85.165 -50.923 -67.541 1.00 54.16 C
ATOM 7 C4' U B 399 86.458 -50.277 -67.152 1.00 46.12 C
ATOM 8 O4' U B 399 87.458 -50.575 -68.147 1.00 43.86 O
ATOM 9 C3' U B 399 86.436 -48.757 -67.053 1.00 35.49 C
ATOM 10 O3' U B 399 85.996 -48.326 -65.781 1.00 42.13 O
ATOM 11 C2' U B 399 87.882 -48.374 -67.351 1.00 43.08 C
ATOM 12 O2' U B 399 88.688 -48.464 -66.179 1.00 39.42 O
ATOM 13 C1' U B 399 88.311 -49.476 -68.322 1.00 43.18 C
ATOM 14 N1 U B 399 88.217 -49.064 -69.714 1.00 42.92 N
ATOM 15 C2 U B 399 89.241 -48.319 -70.236 1.00 43.91 C
ATOM 16 O2 U B 399 90.176 -47.962 -69.568 1.00 45.84 O
ATOM 17 N3 U B 399 89.113 -47.986 -71.549 1.00 45.96 N
ATOM 18 C4 U B 399 88.060 -48.358 -72.358 1.00 50.54 C
ATOM 19 O4 U B 399 88.061 -47.987 -73.531 1.00 57.88 O
ATOM 20 C5 U B 399 87.039 -49.152 -71.736 1.00 47.28 C
ATOM 21 C6 U B 399 87.152 -49.486 -70.455 1.00 42.99 C
ATOM 22 P C B 400 85.400 -46.862 -65.565 1.00 44.38 P
ATOM 23 OP1 C B 400 85.159 -46.692 -64.105 1.00 43.09 O
ATOM 24 OP2 C B 400 84.265 -46.712 -66.502 1.00 56.20 O
ATOM 25 O5' C B 400 86.588 -45.945 -66.001 1.00 32.84 O
TER
ATOM 2 P A A 225 97.926 -56.310 -70.601 1.00 42.10 P
ATOM 3 OP1 A A 225 99.330 -56.220 -71.043 1.00 63.74 O
ATOM 4 OP2 A A 225 97.631 -56.238 -69.157 1.00 57.04 O
ATOM 5 O5' A A 225 97.059 -55.237 -71.373 1.00 41.49 O
ATOM 6 C5' A A 225 96.958 -55.247 -72.786 1.00 42.77 C
ATOM 7 C4' A A 225 96.061 -54.131 -73.282 1.00 43.54 C
ATOM 8 O4' A A 225 94.675 -54.477 -73.074 1.00 48.07 O
ATOM 9 C3' A A 225 96.209 -52.796 -72.577 1.00 47.19 C
ATOM 10 O3' A A 225 97.306 -52.044 -73.058 1.00 46.79 O
ATOM 11 C2' A A 225 94.856 -52.120 -72.817 1.00 44.52 C
ATOM 12 O2' A A 225 94.836 -51.444 -74.063 1.00 56.88 O
ATOM 13 C1' A A 225 93.908 -53.306 -72.903 1.00 42.21 C
ATOM 14 N9 A A 225 93.071 -53.443 -71.702 1.00 45.08 N
ATOM 15 C8 A A 225 93.294 -54.231 -70.610 1.00 46.70 C
ATOM 16 N7 A A 225 92.355 -54.130 -69.705 1.00 48.33 N
ATOM 17 C5 A A 225 91.458 -53.230 -70.252 1.00 45.89 C
ATOM 18 C6 A A 225 90.263 -52.726 -69.763 1.00 46.80 C
ATOM 19 N6 A A 225 89.790 -53.105 -68.568 1.00 50.26 N
ATOM 20 N1 A A 225 89.606 -51.839 -70.530 1.00 41.76 N
ATOM 21 C2 A A 225 90.137 -51.497 -71.700 1.00 41.20 C
ATOM 22 N3 A A 225 91.250 -51.914 -72.277 1.00 43.42 N
ATOM 23 C4 A A 225 91.878 -52.793 -71.483 1.00 46.78 C
ATOM 24 P G A 226 98.112 -51.072 -72.075 1.00 37.08 P
ATOM 25 OP1 G A 226 99.245 -50.539 -72.849 1.00 62.27 O
ATOM 26 OP2 G A 226 98.392 -51.832 -70.818 1.00 44.91 O
ATOM 27 O5' G A 226 97.069 -49.917 -71.794 1.00 34.85 O
TER
ATOM 1 O3' U B 398 82.620 -49.245 -69.881 1.00 48.04 O
ATOM 2 P U B 399 82.951 -50.405 -68.833 1.00 37.81 P
ATOM 3 OP1 U B 399 82.776 -51.702 -69.529 1.00 35.77 O
ATOM 4 OP2 U B 399 82.149 -50.132 -67.603 1.00 55.47 O
ATOM 5 O5' U B 399 84.488 -50.160 -68.530 1.00 61.47 O
ATOM 6 C5' U B 399 85.165 -50.923 -67.541 1.00 54.16 C
ATOM 7 C4' U B 399 86.458 -50.277 -67.152 1.00 46.12 C
ATOM 8 O4' U B 399 87.458 -50.575 -68.147 1.00 43.86 O
ATOM 9 C3' U B 399 86.436 -48.757 -67.053 1.00 35.49 C
ATOM 10 O3' U B 399 85.996 -48.326 -65.781 1.00 42.13 O
ATOM 11 C2' U B 399 87.882 -48.374 -67.351 1.00 43.08 C
ATOM 12 O2' U B 399 88.688 -48.464 -66.179 1.00 39.42 O
ATOM 13 C1' U B 399 88.311 -49.476 -68.322 1.00 43.18 C
ATOM 14 N1 U B 399 88.217 -49.064 -69.714 1.00 42.92 N
ATOM 15 C2 U B 399 89.241 -48.319 -70.236 1.00 43.91 C
ATOM 16 O2 U B 399 90.176 -47.962 -69.568 1.00 45.84 O
ATOM 17 N3 U B 399 89.113 -47.986 -71.549 1.00 45.96 N
ATOM 18 C4 U B 399 88.060 -48.358 -72.358 1.00 50.54 C
ATOM 19 O4 U B 399 88.061 -47.987 -73.531 1.00 57.88 O
ATOM 20 C5 U B 399 87.039 -49.152 -71.736 1.00 47.28 C
ATOM 21 C6 U B 399 87.152 -49.486 -70.455 1.00 42.99 C
ATOM 22 P C B 400 85.400 -46.862 -65.565 1.00 44.38 P
ATOM 23 OP1 C B 400 85.159 -46.692 -64.105 1.00 43.09 O
ATOM 24 OP2 C B 400 84.265 -46.712 -66.502 1.00 56.20 O
ATOM 25 O5' C B 400 86.588 -45.945 -66.001 1.00 32.84 O
TER
Atoms:
OP1: (99.330,-56.220,-71.043)
OP2: (97.631,-56.238,-69.157)
C3': (96.209,-52.796,-72.577)
C1': (93.908,-53.306,-72.903)
C5': (96.958,-55.247,-72.786)
O4': (94.675,-54.477,-73.074)
C8: (93.294,-54.231,-70.610)
O2': (94.836,-51.444,-74.063)
C6: (90.263,-52.726,-69.763)
C5: (91.458,-53.230,-70.252)
C4: (91.878,-52.793,-71.483)
P: (97.926,-56.310,-70.601)
C4': (96.061,-54.131,-73.282)
C2': (94.856,-52.120,-72.817)
C2: (90.137,-51.497,-71.700)
N1: (89.606,-51.839,-70.530)
N3: (91.250,-51.914,-72.277)
N6: (89.790,-53.105,-68.568)
N7: (92.355,-54.130,-69.705)
N9: (93.071,-53.443,-71.702)
O5': (97.059,-55.237,-71.373)
O3': (97.306,-52.044,-73.058)
OP2: (97.631,-56.238,-69.157)
C3': (96.209,-52.796,-72.577)
C1': (93.908,-53.306,-72.903)
C5': (96.958,-55.247,-72.786)
O4': (94.675,-54.477,-73.074)
C8: (93.294,-54.231,-70.610)
O2': (94.836,-51.444,-74.063)
C6: (90.263,-52.726,-69.763)
C5: (91.458,-53.230,-70.252)
C4: (91.878,-52.793,-71.483)
P: (97.926,-56.310,-70.601)
C4': (96.061,-54.131,-73.282)
C2': (94.856,-52.120,-72.817)
C2: (90.137,-51.497,-71.700)
N1: (89.606,-51.839,-70.530)
N3: (91.250,-51.914,-72.277)
N6: (89.790,-53.105,-68.568)
N7: (92.355,-54.130,-69.705)
N9: (93.071,-53.443,-71.702)
O5': (97.059,-55.237,-71.373)
O3': (97.306,-52.044,-73.058)
C4: (88.060,-48.358,-72.358)
N3: (89.113,-47.986,-71.549)
OP1: (82.776,-51.702,-69.529)
OP2: (82.149,-50.132,-67.603)
C2: (89.241,-48.319,-70.236)
C1': (88.311,-49.476,-68.322)
C3': (86.436,-48.757,-67.053)
O5': (84.488,-50.160,-68.530)
O4': (87.458,-50.575,-68.147)
C5': (85.165,-50.923,-67.541)
P: (82.951,-50.405,-68.833)
C4': (86.458,-50.277,-67.152)
C2': (87.882,-48.374,-67.351)
O2': (88.688,-48.464,-66.179)
N1: (88.217,-49.064,-69.714)
O4: (88.061,-47.987,-73.531)
O2: (90.176,-47.962,-69.568)
C6: (87.152,-49.486,-70.455)
C5: (87.039,-49.152,-71.736)
O3': (85.996,-48.326,-65.781)
N3: (89.113,-47.986,-71.549)
OP1: (82.776,-51.702,-69.529)
OP2: (82.149,-50.132,-67.603)
C2: (89.241,-48.319,-70.236)
C1': (88.311,-49.476,-68.322)
C3': (86.436,-48.757,-67.053)
O5': (84.488,-50.160,-68.530)
O4': (87.458,-50.575,-68.147)
C5': (85.165,-50.923,-67.541)
P: (82.951,-50.405,-68.833)
C4': (86.458,-50.277,-67.152)
C2': (87.882,-48.374,-67.351)
O2': (88.688,-48.464,-66.179)
N1: (88.217,-49.064,-69.714)
O4: (88.061,-47.987,-73.531)
O2: (90.176,-47.962,-69.568)
C6: (87.152,-49.486,-70.455)
C5: (87.039,-49.152,-71.736)
O3': (85.996,-48.326,-65.781)
Image (generated by PyMOL):