Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02620:02630
Extra
PDB:
ATOM 1 O3' C A2619 44.292 112.543 168.047 1.00 46.49 O
ATOM 2 P U A2620 44.050 111.037 168.557 1.00 47.62 P
ATOM 3 OP1 U A2620 44.093 111.042 170.044 1.00 49.48 O
ATOM 4 OP2 U A2620 44.958 110.137 167.809 1.00 47.29 O
ATOM 5 O5' U A2620 42.559 110.724 168.100 1.00 47.33 O
ATOM 6 C5' U A2620 41.453 111.444 168.670 1.00 46.40 C
ATOM 7 C4' U A2620 40.209 111.230 167.846 1.00 47.62 C
ATOM 8 O4' U A2620 40.392 111.810 166.525 1.00 48.87 O
ATOM 9 C3' U A2620 39.855 109.788 167.541 1.00 47.49 C
ATOM 10 O3' U A2620 39.208 109.122 168.606 1.00 47.07 O
ATOM 11 C2' U A2620 38.947 109.941 166.334 1.00 47.84 C
ATOM 12 O2' U A2620 37.648 110.363 166.689 1.00 48.02 O
ATOM 13 C1' U A2620 39.674 111.044 165.565 1.00 48.41 C
ATOM 14 N1 U A2620 40.629 110.477 164.600 1.00 49.58 N
ATOM 15 C2 U A2620 40.121 109.958 163.416 1.00 49.75 C
ATOM 16 O2 U A2620 38.938 109.974 163.131 1.00 49.36 O
ATOM 17 N3 U A2620 41.055 109.416 162.579 1.00 50.62 N
ATOM 18 C4 U A2620 42.413 109.337 162.786 1.00 50.85 C
ATOM 19 O4 U A2620 43.117 108.776 161.944 1.00 51.17 O
ATOM 20 C5 U A2620 42.865 109.908 164.019 1.00 49.82 C
ATOM 21 C6 U A2620 41.982 110.444 164.861 1.00 49.08 C
ATOM 22 P G A2621 39.286 107.518 168.691 1.00 49.56 P
ATOM 23 OP1 G A2621 38.206 107.068 169.614 1.00 50.78 O
ATOM 24 OP2 G A2621 40.691 107.115 168.948 1.00 47.50 O
ATOM 25 O5' G A2621 38.887 107.025 167.232 1.00 48.30 O
TER
ATOM 1 O3' C B2629 45.280 106.739 159.136 1.00 44.22 O
ATOM 2 P U B2630 45.493 105.379 158.300 1.00 44.44 P
ATOM 3 OP1 U B2630 44.578 104.358 158.881 1.00 42.66 O
ATOM 4 OP2 U B2630 46.944 105.077 158.188 1.00 42.03 O
ATOM 5 O5' U B2630 44.943 105.766 156.855 1.00 43.86 O
ATOM 6 C5' U B2630 44.562 104.763 155.890 1.00 42.67 C
ATOM 7 C4' U B2630 43.535 105.336 154.937 1.00 43.70 C
ATOM 8 O4' U B2630 42.347 105.683 155.692 1.00 44.61 O
ATOM 9 C3' U B2630 43.950 106.616 154.212 1.00 44.38 C
ATOM 10 O3' U B2630 43.241 106.770 152.972 1.00 44.47 O
ATOM 11 C2' U B2630 43.446 107.688 155.169 1.00 44.89 C
ATOM 12 O2' U B2630 43.256 108.933 154.534 1.00 45.75 O
ATOM 13 C1' U B2630 42.117 107.072 155.605 1.00 45.71 C
ATOM 14 N1 U B2630 41.545 107.513 156.888 1.00 47.11 N
ATOM 15 C2 U B2630 40.162 107.516 156.996 1.00 48.34 C
ATOM 16 O2 U B2630 39.421 107.190 156.084 1.00 49.99 O
ATOM 17 N3 U B2630 39.675 107.912 158.215 1.00 48.82 N
ATOM 18 C4 U B2630 40.404 108.301 159.312 1.00 48.88 C
ATOM 19 O4 U B2630 39.812 108.668 160.327 1.00 48.91 O
ATOM 20 C5 U B2630 41.826 108.277 159.126 1.00 48.80 C
ATOM 21 C6 U B2630 42.335 107.895 157.950 1.00 47.80 C
ATOM 22 P A B2631 43.148 105.545 151.923 1.00 45.46 P
ATOM 23 OP1 A B2631 44.326 104.651 152.082 1.00 43.61 O
ATOM 24 OP2 A B2631 42.849 106.137 150.597 1.00 45.82 O
ATOM 25 O5' A B2631 41.839 104.757 152.377 1.00 45.01 O
TER
ATOM 2 P U A2620 44.050 111.037 168.557 1.00 47.62 P
ATOM 3 OP1 U A2620 44.093 111.042 170.044 1.00 49.48 O
ATOM 4 OP2 U A2620 44.958 110.137 167.809 1.00 47.29 O
ATOM 5 O5' U A2620 42.559 110.724 168.100 1.00 47.33 O
ATOM 6 C5' U A2620 41.453 111.444 168.670 1.00 46.40 C
ATOM 7 C4' U A2620 40.209 111.230 167.846 1.00 47.62 C
ATOM 8 O4' U A2620 40.392 111.810 166.525 1.00 48.87 O
ATOM 9 C3' U A2620 39.855 109.788 167.541 1.00 47.49 C
ATOM 10 O3' U A2620 39.208 109.122 168.606 1.00 47.07 O
ATOM 11 C2' U A2620 38.947 109.941 166.334 1.00 47.84 C
ATOM 12 O2' U A2620 37.648 110.363 166.689 1.00 48.02 O
ATOM 13 C1' U A2620 39.674 111.044 165.565 1.00 48.41 C
ATOM 14 N1 U A2620 40.629 110.477 164.600 1.00 49.58 N
ATOM 15 C2 U A2620 40.121 109.958 163.416 1.00 49.75 C
ATOM 16 O2 U A2620 38.938 109.974 163.131 1.00 49.36 O
ATOM 17 N3 U A2620 41.055 109.416 162.579 1.00 50.62 N
ATOM 18 C4 U A2620 42.413 109.337 162.786 1.00 50.85 C
ATOM 19 O4 U A2620 43.117 108.776 161.944 1.00 51.17 O
ATOM 20 C5 U A2620 42.865 109.908 164.019 1.00 49.82 C
ATOM 21 C6 U A2620 41.982 110.444 164.861 1.00 49.08 C
ATOM 22 P G A2621 39.286 107.518 168.691 1.00 49.56 P
ATOM 23 OP1 G A2621 38.206 107.068 169.614 1.00 50.78 O
ATOM 24 OP2 G A2621 40.691 107.115 168.948 1.00 47.50 O
ATOM 25 O5' G A2621 38.887 107.025 167.232 1.00 48.30 O
TER
ATOM 1 O3' C B2629 45.280 106.739 159.136 1.00 44.22 O
ATOM 2 P U B2630 45.493 105.379 158.300 1.00 44.44 P
ATOM 3 OP1 U B2630 44.578 104.358 158.881 1.00 42.66 O
ATOM 4 OP2 U B2630 46.944 105.077 158.188 1.00 42.03 O
ATOM 5 O5' U B2630 44.943 105.766 156.855 1.00 43.86 O
ATOM 6 C5' U B2630 44.562 104.763 155.890 1.00 42.67 C
ATOM 7 C4' U B2630 43.535 105.336 154.937 1.00 43.70 C
ATOM 8 O4' U B2630 42.347 105.683 155.692 1.00 44.61 O
ATOM 9 C3' U B2630 43.950 106.616 154.212 1.00 44.38 C
ATOM 10 O3' U B2630 43.241 106.770 152.972 1.00 44.47 O
ATOM 11 C2' U B2630 43.446 107.688 155.169 1.00 44.89 C
ATOM 12 O2' U B2630 43.256 108.933 154.534 1.00 45.75 O
ATOM 13 C1' U B2630 42.117 107.072 155.605 1.00 45.71 C
ATOM 14 N1 U B2630 41.545 107.513 156.888 1.00 47.11 N
ATOM 15 C2 U B2630 40.162 107.516 156.996 1.00 48.34 C
ATOM 16 O2 U B2630 39.421 107.190 156.084 1.00 49.99 O
ATOM 17 N3 U B2630 39.675 107.912 158.215 1.00 48.82 N
ATOM 18 C4 U B2630 40.404 108.301 159.312 1.00 48.88 C
ATOM 19 O4 U B2630 39.812 108.668 160.327 1.00 48.91 O
ATOM 20 C5 U B2630 41.826 108.277 159.126 1.00 48.80 C
ATOM 21 C6 U B2630 42.335 107.895 157.950 1.00 47.80 C
ATOM 22 P A B2631 43.148 105.545 151.923 1.00 45.46 P
ATOM 23 OP1 A B2631 44.326 104.651 152.082 1.00 43.61 O
ATOM 24 OP2 A B2631 42.849 106.137 150.597 1.00 45.82 O
ATOM 25 O5' A B2631 41.839 104.757 152.377 1.00 45.01 O
TER
Atoms:
C4: (42.413,109.337,162.786)
N3: (41.055,109.416,162.579)
OP1: (44.093,111.042,170.044)
OP2: (44.958,110.137,167.809)
C2: (40.121,109.958,163.416)
C1': (39.674,111.044,165.565)
C3': (39.855,109.788,167.541)
O5': (42.559,110.724,168.100)
O4': (40.392,111.810,166.525)
C5': (41.453,111.444,168.670)
P: (44.050,111.037,168.557)
C4': (40.209,111.230,167.846)
C2': (38.947,109.941,166.334)
O2': (37.648,110.363,166.689)
N1: (40.629,110.477,164.600)
O4: (43.117,108.776,161.944)
O2: (38.938,109.974,163.131)
C6: (41.982,110.444,164.861)
C5: (42.865,109.908,164.019)
O3': (39.208,109.122,168.606)
N3: (41.055,109.416,162.579)
OP1: (44.093,111.042,170.044)
OP2: (44.958,110.137,167.809)
C2: (40.121,109.958,163.416)
C1': (39.674,111.044,165.565)
C3': (39.855,109.788,167.541)
O5': (42.559,110.724,168.100)
O4': (40.392,111.810,166.525)
C5': (41.453,111.444,168.670)
P: (44.050,111.037,168.557)
C4': (40.209,111.230,167.846)
C2': (38.947,109.941,166.334)
O2': (37.648,110.363,166.689)
N1: (40.629,110.477,164.600)
O4: (43.117,108.776,161.944)
O2: (38.938,109.974,163.131)
C6: (41.982,110.444,164.861)
C5: (42.865,109.908,164.019)
O3': (39.208,109.122,168.606)
C4: (40.404,108.301,159.312)
N3: (39.675,107.912,158.215)
OP1: (44.578,104.358,158.881)
OP2: (46.944,105.077,158.188)
C2: (40.162,107.516,156.996)
C1': (42.117,107.072,155.605)
C3': (43.950,106.616,154.212)
O5': (44.943,105.766,156.855)
O4': (42.347,105.683,155.692)
C5': (44.562,104.763,155.890)
P: (45.493,105.379,158.300)
C4': (43.535,105.336,154.937)
C2': (43.446,107.688,155.169)
O2': (43.256,108.933,154.534)
N1: (41.545,107.513,156.888)
O4: (39.812,108.668,160.327)
O2: (39.421,107.190,156.084)
C6: (42.335,107.895,157.950)
C5: (41.826,108.277,159.126)
O3': (43.241,106.770,152.972)
N3: (39.675,107.912,158.215)
OP1: (44.578,104.358,158.881)
OP2: (46.944,105.077,158.188)
C2: (40.162,107.516,156.996)
C1': (42.117,107.072,155.605)
C3': (43.950,106.616,154.212)
O5': (44.943,105.766,156.855)
O4': (42.347,105.683,155.692)
C5': (44.562,104.763,155.890)
P: (45.493,105.379,158.300)
C4': (43.535,105.336,154.937)
C2': (43.446,107.688,155.169)
O2': (43.256,108.933,154.534)
N1: (41.545,107.513,156.888)
O4: (39.812,108.668,160.327)
O2: (39.421,107.190,156.084)
C6: (42.335,107.895,157.950)
C5: (41.826,108.277,159.126)
O3': (43.241,106.770,152.972)
Image (generated by PyMOL):