Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02620:02630
Extra
PDB:
ATOM 1 O3' C A2619 44.258 112.897 168.529 1.00 54.43 O
ATOM 2 P U A2620 44.037 111.399 169.054 1.00 54.40 P
ATOM 3 OP1 U A2620 44.049 111.442 170.539 1.00 56.12 O
ATOM 4 OP2 U A2620 45.000 110.527 168.339 1.00 53.78 O
ATOM 5 O5' U A2620 42.564 111.047 168.573 1.00 53.00 O
ATOM 6 C5' U A2620 41.442 111.773 169.091 1.00 53.09 C
ATOM 7 C4' U A2620 40.218 111.511 168.257 1.00 52.57 C
ATOM 8 O4' U A2620 40.401 112.098 166.941 1.00 51.54 O
ATOM 9 C3' U A2620 39.923 110.052 167.965 1.00 52.78 C
ATOM 10 O3' U A2620 39.285 109.368 169.038 1.00 52.79 O
ATOM 11 C2' U A2620 39.048 110.159 166.726 1.00 53.34 C
ATOM 12 O2' U A2620 37.714 110.504 167.026 1.00 53.25 O
ATOM 13 C1' U A2620 39.745 111.297 165.972 1.00 53.38 C
ATOM 14 N1 U A2620 40.751 110.773 165.034 1.00 54.99 N
ATOM 15 C2 U A2620 40.297 110.253 163.829 1.00 55.38 C
ATOM 16 O2 U A2620 39.130 110.262 163.494 1.00 54.76 O
ATOM 17 N3 U A2620 41.268 109.718 163.030 1.00 57.70 N
ATOM 18 C4 U A2620 42.620 109.651 163.292 1.00 58.58 C
ATOM 19 O4 U A2620 43.362 109.088 162.480 1.00 59.16 O
ATOM 20 C5 U A2620 43.020 110.238 164.541 1.00 56.20 C
ATOM 21 C6 U A2620 42.096 110.767 165.346 1.00 55.42 C
ATOM 22 P G A2621 39.382 107.759 169.126 1.00 54.07 P
ATOM 23 OP1 G A2621 38.324 107.297 170.052 1.00 55.12 O
ATOM 24 OP2 G A2621 40.785 107.347 169.365 1.00 54.52 O
ATOM 25 O5' G A2621 38.969 107.270 167.671 1.00 54.99 O
TER
ATOM 1 O3' C B2629 45.365 107.025 159.584 1.00 52.87 O
ATOM 2 P U B2630 45.554 105.672 158.722 1.00 51.63 P
ATOM 3 OP1 U B2630 44.664 104.643 159.319 1.00 51.74 O
ATOM 4 OP2 U B2630 46.991 105.368 158.544 1.00 51.06 O
ATOM 5 O5' U B2630 44.932 106.069 157.311 1.00 51.59 O
ATOM 6 C5' U B2630 44.574 105.071 156.337 1.00 53.28 C
ATOM 7 C4' U B2630 43.547 105.633 155.380 1.00 55.09 C
ATOM 8 O4' U B2630 42.348 105.946 156.132 1.00 55.87 O
ATOM 9 C3' U B2630 43.950 106.931 154.674 1.00 55.68 C
ATOM 10 O3' U B2630 43.279 107.087 153.409 1.00 54.78 O
ATOM 11 C2' U B2630 43.407 107.980 155.638 1.00 56.50 C
ATOM 12 O2' U B2630 43.176 109.238 155.043 1.00 59.37 O
ATOM 13 C1' U B2630 42.092 107.329 156.055 1.00 56.83 C
ATOM 14 N1 U B2630 41.534 107.761 157.342 1.00 58.15 N
ATOM 15 C2 U B2630 40.158 107.836 157.436 1.00 58.99 C
ATOM 16 O2 U B2630 39.417 107.560 156.513 1.00 57.87 O
ATOM 17 N3 U B2630 39.678 108.245 158.655 1.00 60.68 N
ATOM 18 C4 U B2630 40.417 108.579 159.768 1.00 60.74 C
ATOM 19 O4 U B2630 39.838 108.988 160.774 1.00 59.97 O
ATOM 20 C5 U B2630 41.838 108.468 159.596 1.00 61.09 C
ATOM 21 C6 U B2630 42.335 108.075 158.417 1.00 59.14 C
ATOM 22 P A B2631 43.249 105.876 152.342 1.00 53.77 P
ATOM 23 OP1 A B2631 44.448 105.024 152.535 1.00 52.23 O
ATOM 24 OP2 A B2631 42.972 106.465 151.010 1.00 52.65 O
ATOM 25 O5' A B2631 41.954 105.053 152.765 1.00 53.17 O
TER
ATOM 2 P U A2620 44.037 111.399 169.054 1.00 54.40 P
ATOM 3 OP1 U A2620 44.049 111.442 170.539 1.00 56.12 O
ATOM 4 OP2 U A2620 45.000 110.527 168.339 1.00 53.78 O
ATOM 5 O5' U A2620 42.564 111.047 168.573 1.00 53.00 O
ATOM 6 C5' U A2620 41.442 111.773 169.091 1.00 53.09 C
ATOM 7 C4' U A2620 40.218 111.511 168.257 1.00 52.57 C
ATOM 8 O4' U A2620 40.401 112.098 166.941 1.00 51.54 O
ATOM 9 C3' U A2620 39.923 110.052 167.965 1.00 52.78 C
ATOM 10 O3' U A2620 39.285 109.368 169.038 1.00 52.79 O
ATOM 11 C2' U A2620 39.048 110.159 166.726 1.00 53.34 C
ATOM 12 O2' U A2620 37.714 110.504 167.026 1.00 53.25 O
ATOM 13 C1' U A2620 39.745 111.297 165.972 1.00 53.38 C
ATOM 14 N1 U A2620 40.751 110.773 165.034 1.00 54.99 N
ATOM 15 C2 U A2620 40.297 110.253 163.829 1.00 55.38 C
ATOM 16 O2 U A2620 39.130 110.262 163.494 1.00 54.76 O
ATOM 17 N3 U A2620 41.268 109.718 163.030 1.00 57.70 N
ATOM 18 C4 U A2620 42.620 109.651 163.292 1.00 58.58 C
ATOM 19 O4 U A2620 43.362 109.088 162.480 1.00 59.16 O
ATOM 20 C5 U A2620 43.020 110.238 164.541 1.00 56.20 C
ATOM 21 C6 U A2620 42.096 110.767 165.346 1.00 55.42 C
ATOM 22 P G A2621 39.382 107.759 169.126 1.00 54.07 P
ATOM 23 OP1 G A2621 38.324 107.297 170.052 1.00 55.12 O
ATOM 24 OP2 G A2621 40.785 107.347 169.365 1.00 54.52 O
ATOM 25 O5' G A2621 38.969 107.270 167.671 1.00 54.99 O
TER
ATOM 1 O3' C B2629 45.365 107.025 159.584 1.00 52.87 O
ATOM 2 P U B2630 45.554 105.672 158.722 1.00 51.63 P
ATOM 3 OP1 U B2630 44.664 104.643 159.319 1.00 51.74 O
ATOM 4 OP2 U B2630 46.991 105.368 158.544 1.00 51.06 O
ATOM 5 O5' U B2630 44.932 106.069 157.311 1.00 51.59 O
ATOM 6 C5' U B2630 44.574 105.071 156.337 1.00 53.28 C
ATOM 7 C4' U B2630 43.547 105.633 155.380 1.00 55.09 C
ATOM 8 O4' U B2630 42.348 105.946 156.132 1.00 55.87 O
ATOM 9 C3' U B2630 43.950 106.931 154.674 1.00 55.68 C
ATOM 10 O3' U B2630 43.279 107.087 153.409 1.00 54.78 O
ATOM 11 C2' U B2630 43.407 107.980 155.638 1.00 56.50 C
ATOM 12 O2' U B2630 43.176 109.238 155.043 1.00 59.37 O
ATOM 13 C1' U B2630 42.092 107.329 156.055 1.00 56.83 C
ATOM 14 N1 U B2630 41.534 107.761 157.342 1.00 58.15 N
ATOM 15 C2 U B2630 40.158 107.836 157.436 1.00 58.99 C
ATOM 16 O2 U B2630 39.417 107.560 156.513 1.00 57.87 O
ATOM 17 N3 U B2630 39.678 108.245 158.655 1.00 60.68 N
ATOM 18 C4 U B2630 40.417 108.579 159.768 1.00 60.74 C
ATOM 19 O4 U B2630 39.838 108.988 160.774 1.00 59.97 O
ATOM 20 C5 U B2630 41.838 108.468 159.596 1.00 61.09 C
ATOM 21 C6 U B2630 42.335 108.075 158.417 1.00 59.14 C
ATOM 22 P A B2631 43.249 105.876 152.342 1.00 53.77 P
ATOM 23 OP1 A B2631 44.448 105.024 152.535 1.00 52.23 O
ATOM 24 OP2 A B2631 42.972 106.465 151.010 1.00 52.65 O
ATOM 25 O5' A B2631 41.954 105.053 152.765 1.00 53.17 O
TER
Atoms:
C4: (42.620,109.651,163.292)
N3: (41.268,109.718,163.030)
OP1: (44.049,111.442,170.539)
OP2: (45.000,110.527,168.339)
C2: (40.297,110.253,163.829)
C1': (39.745,111.297,165.972)
C3': (39.923,110.052,167.965)
O5': (42.564,111.047,168.573)
O4': (40.401,112.098,166.941)
C5': (41.442,111.773,169.091)
P: (44.037,111.399,169.054)
C4': (40.218,111.511,168.257)
C2': (39.048,110.159,166.726)
O2': (37.714,110.504,167.026)
N1: (40.751,110.773,165.034)
O4: (43.362,109.088,162.480)
O2: (39.130,110.262,163.494)
C6: (42.096,110.767,165.346)
C5: (43.020,110.238,164.541)
O3': (39.285,109.368,169.038)
N3: (41.268,109.718,163.030)
OP1: (44.049,111.442,170.539)
OP2: (45.000,110.527,168.339)
C2: (40.297,110.253,163.829)
C1': (39.745,111.297,165.972)
C3': (39.923,110.052,167.965)
O5': (42.564,111.047,168.573)
O4': (40.401,112.098,166.941)
C5': (41.442,111.773,169.091)
P: (44.037,111.399,169.054)
C4': (40.218,111.511,168.257)
C2': (39.048,110.159,166.726)
O2': (37.714,110.504,167.026)
N1: (40.751,110.773,165.034)
O4: (43.362,109.088,162.480)
O2: (39.130,110.262,163.494)
C6: (42.096,110.767,165.346)
C5: (43.020,110.238,164.541)
O3': (39.285,109.368,169.038)
C4: (40.417,108.579,159.768)
N3: (39.678,108.245,158.655)
OP1: (44.664,104.643,159.319)
OP2: (46.991,105.368,158.544)
C2: (40.158,107.836,157.436)
C1': (42.092,107.329,156.055)
C3': (43.950,106.931,154.674)
O5': (44.932,106.069,157.311)
O4': (42.348,105.946,156.132)
C5': (44.574,105.071,156.337)
P: (45.554,105.672,158.722)
C4': (43.547,105.633,155.380)
C2': (43.407,107.980,155.638)
O2': (43.176,109.238,155.043)
N1: (41.534,107.761,157.342)
O4: (39.838,108.988,160.774)
O2: (39.417,107.560,156.513)
C6: (42.335,108.075,158.417)
C5: (41.838,108.468,159.596)
O3': (43.279,107.087,153.409)
N3: (39.678,108.245,158.655)
OP1: (44.664,104.643,159.319)
OP2: (46.991,105.368,158.544)
C2: (40.158,107.836,157.436)
C1': (42.092,107.329,156.055)
C3': (43.950,106.931,154.674)
O5': (44.932,106.069,157.311)
O4': (42.348,105.946,156.132)
C5': (44.574,105.071,156.337)
P: (45.554,105.672,158.722)
C4': (43.547,105.633,155.380)
C2': (43.407,107.980,155.638)
O2': (43.176,109.238,155.043)
N1: (41.534,107.761,157.342)
O4: (39.838,108.988,160.774)
O2: (39.417,107.560,156.513)
C6: (42.335,108.075,158.417)
C5: (41.838,108.468,159.596)
O3': (43.279,107.087,153.409)
Image (generated by PyMOL):