Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02620:02630
Extra
PDB:
ATOM 1 O3' C A2619 44.155 112.568 168.111 1.00 52.73 O
ATOM 2 P U A2620 43.892 111.068 168.626 1.00 53.16 P
ATOM 3 OP1 U A2620 43.917 111.081 170.113 1.00 53.98 O
ATOM 4 OP2 U A2620 44.800 110.152 167.892 1.00 52.71 O
ATOM 5 O5' U A2620 42.405 110.763 168.154 1.00 51.80 O
ATOM 6 C5' U A2620 41.299 111.496 168.702 1.00 52.02 C
ATOM 7 C4' U A2620 40.058 111.252 167.888 1.00 51.82 C
ATOM 8 O4' U A2620 40.220 111.833 166.566 1.00 52.53 O
ATOM 9 C3' U A2620 39.764 109.795 167.606 1.00 51.77 C
ATOM 10 O3' U A2620 39.112 109.154 168.682 1.00 53.32 O
ATOM 11 C2' U A2620 38.888 109.878 166.369 1.00 51.94 C
ATOM 12 O2' U A2620 37.552 110.200 166.679 1.00 53.33 O
ATOM 13 C1' U A2620 39.556 111.025 165.608 1.00 52.17 C
ATOM 14 N1 U A2620 40.546 110.524 164.644 1.00 52.73 N
ATOM 15 C2 U A2620 40.067 109.988 163.462 1.00 52.95 C
ATOM 16 O2 U A2620 38.885 109.966 163.171 1.00 52.24 O
ATOM 17 N3 U A2620 41.026 109.476 162.631 1.00 53.38 N
ATOM 18 C4 U A2620 42.385 109.452 162.844 1.00 53.71 C
ATOM 19 O4 U A2620 43.114 108.910 162.010 1.00 54.40 O
ATOM 20 C5 U A2620 42.809 110.055 164.075 1.00 52.40 C
ATOM 21 C6 U A2620 41.900 110.559 164.909 1.00 52.10 C
ATOM 22 P G A2621 39.199 107.554 168.811 1.00 57.03 P
ATOM 23 OP1 G A2621 38.144 107.109 169.753 1.00 58.94 O
ATOM 24 OP2 G A2621 40.613 107.170 169.058 1.00 55.66 O
ATOM 25 O5' G A2621 38.780 107.032 167.367 1.00 57.20 O
TER
ATOM 1 O3' C B2629 45.273 106.741 159.313 1.00 48.82 O
ATOM 2 P U B2630 45.446 105.447 158.370 1.00 49.67 P
ATOM 3 OP1 U B2630 44.599 104.368 158.944 1.00 47.43 O
ATOM 4 OP2 U B2630 46.885 105.193 158.120 1.00 48.27 O
ATOM 5 O5' U B2630 44.774 105.902 156.999 1.00 50.48 O
ATOM 6 C5' U B2630 44.539 104.963 155.928 1.00 51.41 C
ATOM 7 C4' U B2630 43.516 105.523 154.963 1.00 52.08 C
ATOM 8 O4' U B2630 42.304 105.812 155.700 1.00 52.28 O
ATOM 9 C3' U B2630 43.891 106.829 154.266 1.00 52.63 C
ATOM 10 O3' U B2630 43.177 106.976 153.030 1.00 54.63 O
ATOM 11 C2' U B2630 43.336 107.865 155.229 1.00 51.56 C
ATOM 12 O2' U B2630 43.072 109.092 154.593 1.00 53.36 O
ATOM 13 C1' U B2630 42.029 107.195 155.641 1.00 52.04 C
ATOM 14 N1 U B2630 41.467 107.599 156.939 1.00 52.72 N
ATOM 15 C2 U B2630 40.089 107.754 157.020 1.00 52.63 C
ATOM 16 O2 U B2630 39.340 107.587 156.071 1.00 51.96 O
ATOM 17 N3 U B2630 39.619 108.110 158.256 1.00 52.77 N
ATOM 18 C4 U B2630 40.362 108.329 159.392 1.00 53.58 C
ATOM 19 O4 U B2630 39.794 108.705 160.415 1.00 55.23 O
ATOM 20 C5 U B2630 41.773 108.153 159.231 1.00 53.49 C
ATOM 21 C6 U B2630 42.266 107.805 158.042 1.00 52.56 C
ATOM 22 P A B2631 43.112 105.758 151.972 1.00 56.32 P
ATOM 23 OP1 A B2631 44.315 104.901 152.132 1.00 56.03 O
ATOM 24 OP2 A B2631 42.801 106.347 150.646 1.00 57.20 O
ATOM 25 O5' A B2631 41.828 104.938 152.429 1.00 54.61 O
TER
ATOM 2 P U A2620 43.892 111.068 168.626 1.00 53.16 P
ATOM 3 OP1 U A2620 43.917 111.081 170.113 1.00 53.98 O
ATOM 4 OP2 U A2620 44.800 110.152 167.892 1.00 52.71 O
ATOM 5 O5' U A2620 42.405 110.763 168.154 1.00 51.80 O
ATOM 6 C5' U A2620 41.299 111.496 168.702 1.00 52.02 C
ATOM 7 C4' U A2620 40.058 111.252 167.888 1.00 51.82 C
ATOM 8 O4' U A2620 40.220 111.833 166.566 1.00 52.53 O
ATOM 9 C3' U A2620 39.764 109.795 167.606 1.00 51.77 C
ATOM 10 O3' U A2620 39.112 109.154 168.682 1.00 53.32 O
ATOM 11 C2' U A2620 38.888 109.878 166.369 1.00 51.94 C
ATOM 12 O2' U A2620 37.552 110.200 166.679 1.00 53.33 O
ATOM 13 C1' U A2620 39.556 111.025 165.608 1.00 52.17 C
ATOM 14 N1 U A2620 40.546 110.524 164.644 1.00 52.73 N
ATOM 15 C2 U A2620 40.067 109.988 163.462 1.00 52.95 C
ATOM 16 O2 U A2620 38.885 109.966 163.171 1.00 52.24 O
ATOM 17 N3 U A2620 41.026 109.476 162.631 1.00 53.38 N
ATOM 18 C4 U A2620 42.385 109.452 162.844 1.00 53.71 C
ATOM 19 O4 U A2620 43.114 108.910 162.010 1.00 54.40 O
ATOM 20 C5 U A2620 42.809 110.055 164.075 1.00 52.40 C
ATOM 21 C6 U A2620 41.900 110.559 164.909 1.00 52.10 C
ATOM 22 P G A2621 39.199 107.554 168.811 1.00 57.03 P
ATOM 23 OP1 G A2621 38.144 107.109 169.753 1.00 58.94 O
ATOM 24 OP2 G A2621 40.613 107.170 169.058 1.00 55.66 O
ATOM 25 O5' G A2621 38.780 107.032 167.367 1.00 57.20 O
TER
ATOM 1 O3' C B2629 45.273 106.741 159.313 1.00 48.82 O
ATOM 2 P U B2630 45.446 105.447 158.370 1.00 49.67 P
ATOM 3 OP1 U B2630 44.599 104.368 158.944 1.00 47.43 O
ATOM 4 OP2 U B2630 46.885 105.193 158.120 1.00 48.27 O
ATOM 5 O5' U B2630 44.774 105.902 156.999 1.00 50.48 O
ATOM 6 C5' U B2630 44.539 104.963 155.928 1.00 51.41 C
ATOM 7 C4' U B2630 43.516 105.523 154.963 1.00 52.08 C
ATOM 8 O4' U B2630 42.304 105.812 155.700 1.00 52.28 O
ATOM 9 C3' U B2630 43.891 106.829 154.266 1.00 52.63 C
ATOM 10 O3' U B2630 43.177 106.976 153.030 1.00 54.63 O
ATOM 11 C2' U B2630 43.336 107.865 155.229 1.00 51.56 C
ATOM 12 O2' U B2630 43.072 109.092 154.593 1.00 53.36 O
ATOM 13 C1' U B2630 42.029 107.195 155.641 1.00 52.04 C
ATOM 14 N1 U B2630 41.467 107.599 156.939 1.00 52.72 N
ATOM 15 C2 U B2630 40.089 107.754 157.020 1.00 52.63 C
ATOM 16 O2 U B2630 39.340 107.587 156.071 1.00 51.96 O
ATOM 17 N3 U B2630 39.619 108.110 158.256 1.00 52.77 N
ATOM 18 C4 U B2630 40.362 108.329 159.392 1.00 53.58 C
ATOM 19 O4 U B2630 39.794 108.705 160.415 1.00 55.23 O
ATOM 20 C5 U B2630 41.773 108.153 159.231 1.00 53.49 C
ATOM 21 C6 U B2630 42.266 107.805 158.042 1.00 52.56 C
ATOM 22 P A B2631 43.112 105.758 151.972 1.00 56.32 P
ATOM 23 OP1 A B2631 44.315 104.901 152.132 1.00 56.03 O
ATOM 24 OP2 A B2631 42.801 106.347 150.646 1.00 57.20 O
ATOM 25 O5' A B2631 41.828 104.938 152.429 1.00 54.61 O
TER
Atoms:
C4: (42.385,109.452,162.844)
N3: (41.026,109.476,162.631)
OP1: (43.917,111.081,170.113)
OP2: (44.800,110.152,167.892)
C2: (40.067,109.988,163.462)
C1': (39.556,111.025,165.608)
C3': (39.764,109.795,167.606)
O5': (42.405,110.763,168.154)
O4': (40.220,111.833,166.566)
C5': (41.299,111.496,168.702)
P: (43.892,111.068,168.626)
C4': (40.058,111.252,167.888)
C2': (38.888,109.878,166.369)
O2': (37.552,110.200,166.679)
N1: (40.546,110.524,164.644)
O4: (43.114,108.910,162.010)
O2: (38.885,109.966,163.171)
C6: (41.900,110.559,164.909)
C5: (42.809,110.055,164.075)
O3': (39.112,109.154,168.682)
N3: (41.026,109.476,162.631)
OP1: (43.917,111.081,170.113)
OP2: (44.800,110.152,167.892)
C2: (40.067,109.988,163.462)
C1': (39.556,111.025,165.608)
C3': (39.764,109.795,167.606)
O5': (42.405,110.763,168.154)
O4': (40.220,111.833,166.566)
C5': (41.299,111.496,168.702)
P: (43.892,111.068,168.626)
C4': (40.058,111.252,167.888)
C2': (38.888,109.878,166.369)
O2': (37.552,110.200,166.679)
N1: (40.546,110.524,164.644)
O4: (43.114,108.910,162.010)
O2: (38.885,109.966,163.171)
C6: (41.900,110.559,164.909)
C5: (42.809,110.055,164.075)
O3': (39.112,109.154,168.682)
C4: (40.362,108.329,159.392)
N3: (39.619,108.110,158.256)
OP1: (44.599,104.368,158.944)
OP2: (46.885,105.193,158.120)
C2: (40.089,107.754,157.020)
C1': (42.029,107.195,155.641)
C3': (43.891,106.829,154.266)
O5': (44.774,105.902,156.999)
O4': (42.304,105.812,155.700)
C5': (44.539,104.963,155.928)
P: (45.446,105.447,158.370)
C4': (43.516,105.523,154.963)
C2': (43.336,107.865,155.229)
O2': (43.072,109.092,154.593)
N1: (41.467,107.599,156.939)
O4: (39.794,108.705,160.415)
O2: (39.340,107.587,156.071)
C6: (42.266,107.805,158.042)
C5: (41.773,108.153,159.231)
O3': (43.177,106.976,153.030)
N3: (39.619,108.110,158.256)
OP1: (44.599,104.368,158.944)
OP2: (46.885,105.193,158.120)
C2: (40.089,107.754,157.020)
C1': (42.029,107.195,155.641)
C3': (43.891,106.829,154.266)
O5': (44.774,105.902,156.999)
O4': (42.304,105.812,155.700)
C5': (44.539,104.963,155.928)
P: (45.446,105.447,158.370)
C4': (43.516,105.523,154.963)
C2': (43.336,107.865,155.229)
O2': (43.072,109.092,154.593)
N1: (41.467,107.599,156.939)
O4: (39.794,108.705,160.415)
O2: (39.340,107.587,156.071)
C6: (42.266,107.805,158.042)
C5: (41.773,108.153,159.231)
O3': (43.177,106.976,153.030)
Image (generated by PyMOL):