Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02620:02630
Extra
PDB:
ATOM 1 O3' C A2619 44.180 112.386 168.093 1.00 46.91 O
ATOM 2 P U A2620 43.904 110.894 168.608 1.00 47.15 P
ATOM 3 OP1 U A2620 43.898 110.917 170.092 1.00 49.35 O
ATOM 4 OP2 U A2620 44.829 109.977 167.896 1.00 47.49 O
ATOM 5 O5' U A2620 42.424 110.608 168.111 1.00 45.04 O
ATOM 6 C5' U A2620 41.325 111.301 168.705 1.00 45.89 C
ATOM 7 C4' U A2620 40.071 111.065 167.911 1.00 46.75 C
ATOM 8 O4' U A2620 40.212 111.667 166.596 1.00 46.88 O
ATOM 9 C3' U A2620 39.747 109.615 167.608 1.00 46.15 C
ATOM 10 O3' U A2620 39.126 108.937 168.685 1.00 46.60 O
ATOM 11 C2' U A2620 38.821 109.760 166.417 1.00 46.63 C
ATOM 12 O2' U A2620 37.527 110.162 166.820 1.00 46.13 O
ATOM 13 C1' U A2620 39.520 110.879 165.640 1.00 46.94 C
ATOM 14 N1 U A2620 40.499 110.331 164.689 1.00 46.99 N
ATOM 15 C2 U A2620 40.020 109.838 163.488 1.00 47.08 C
ATOM 16 O2 U A2620 38.851 109.900 163.162 1.00 45.30 O
ATOM 17 N3 U A2620 40.966 109.271 162.679 1.00 49.12 N
ATOM 18 C4 U A2620 42.318 109.160 162.927 1.00 49.62 C
ATOM 19 O4 U A2620 43.039 108.590 162.101 1.00 49.66 O
ATOM 20 C5 U A2620 42.744 109.726 164.172 1.00 48.48 C
ATOM 21 C6 U A2620 41.844 110.279 164.988 1.00 47.61 C
ATOM 22 P G A2621 39.243 107.336 168.779 1.00 49.33 P
ATOM 23 OP1 G A2621 38.202 106.858 169.725 1.00 51.54 O
ATOM 24 OP2 G A2621 40.659 106.956 168.998 1.00 48.28 O
ATOM 25 O5' G A2621 38.823 106.834 167.329 1.00 49.73 O
TER
ATOM 1 O3' C B2629 45.152 106.535 159.267 1.00 45.64 O
ATOM 2 P U B2630 45.398 105.216 158.379 1.00 45.23 P
ATOM 3 OP1 U B2630 44.527 104.143 158.926 1.00 45.14 O
ATOM 4 OP2 U B2630 46.859 104.971 158.254 1.00 43.02 O
ATOM 5 O5' U B2630 44.816 105.642 156.956 1.00 46.25 O
ATOM 6 C5' U B2630 44.488 104.666 155.941 1.00 46.36 C
ATOM 7 C4' U B2630 43.483 105.251 154.968 1.00 46.99 C
ATOM 8 O4' U B2630 42.265 105.569 155.686 1.00 47.65 O
ATOM 9 C3' U B2630 43.900 106.545 154.273 1.00 47.63 C
ATOM 10 O3' U B2630 43.224 106.704 153.019 1.00 48.43 O
ATOM 11 C2' U B2630 43.348 107.598 155.222 1.00 48.08 C
ATOM 12 O2' U B2630 43.152 108.844 154.590 1.00 49.69 O
ATOM 13 C1' U B2630 42.020 106.957 155.622 1.00 48.06 C
ATOM 14 N1 U B2630 41.452 107.361 156.917 1.00 49.46 N
ATOM 15 C2 U B2630 40.074 107.443 157.009 1.00 50.09 C
ATOM 16 O2 U B2630 39.333 107.236 156.070 1.00 51.52 O
ATOM 17 N3 U B2630 39.594 107.776 158.247 1.00 51.62 N
ATOM 18 C4 U B2630 40.330 108.035 159.380 1.00 52.54 C
ATOM 19 O4 U B2630 39.744 108.276 160.435 1.00 53.61 O
ATOM 20 C5 U B2630 41.748 107.953 159.204 1.00 52.21 C
ATOM 21 C6 U B2630 42.248 107.627 158.010 1.00 50.63 C
ATOM 22 P A B2631 43.164 105.487 151.962 1.00 49.60 P
ATOM 23 OP1 A B2631 44.347 104.603 152.144 1.00 49.59 O
ATOM 24 OP2 A B2631 42.894 106.084 150.629 1.00 50.84 O
ATOM 25 O5' A B2631 41.860 104.683 152.400 1.00 49.17 O
TER
ATOM 2 P U A2620 43.904 110.894 168.608 1.00 47.15 P
ATOM 3 OP1 U A2620 43.898 110.917 170.092 1.00 49.35 O
ATOM 4 OP2 U A2620 44.829 109.977 167.896 1.00 47.49 O
ATOM 5 O5' U A2620 42.424 110.608 168.111 1.00 45.04 O
ATOM 6 C5' U A2620 41.325 111.301 168.705 1.00 45.89 C
ATOM 7 C4' U A2620 40.071 111.065 167.911 1.00 46.75 C
ATOM 8 O4' U A2620 40.212 111.667 166.596 1.00 46.88 O
ATOM 9 C3' U A2620 39.747 109.615 167.608 1.00 46.15 C
ATOM 10 O3' U A2620 39.126 108.937 168.685 1.00 46.60 O
ATOM 11 C2' U A2620 38.821 109.760 166.417 1.00 46.63 C
ATOM 12 O2' U A2620 37.527 110.162 166.820 1.00 46.13 O
ATOM 13 C1' U A2620 39.520 110.879 165.640 1.00 46.94 C
ATOM 14 N1 U A2620 40.499 110.331 164.689 1.00 46.99 N
ATOM 15 C2 U A2620 40.020 109.838 163.488 1.00 47.08 C
ATOM 16 O2 U A2620 38.851 109.900 163.162 1.00 45.30 O
ATOM 17 N3 U A2620 40.966 109.271 162.679 1.00 49.12 N
ATOM 18 C4 U A2620 42.318 109.160 162.927 1.00 49.62 C
ATOM 19 O4 U A2620 43.039 108.590 162.101 1.00 49.66 O
ATOM 20 C5 U A2620 42.744 109.726 164.172 1.00 48.48 C
ATOM 21 C6 U A2620 41.844 110.279 164.988 1.00 47.61 C
ATOM 22 P G A2621 39.243 107.336 168.779 1.00 49.33 P
ATOM 23 OP1 G A2621 38.202 106.858 169.725 1.00 51.54 O
ATOM 24 OP2 G A2621 40.659 106.956 168.998 1.00 48.28 O
ATOM 25 O5' G A2621 38.823 106.834 167.329 1.00 49.73 O
TER
ATOM 1 O3' C B2629 45.152 106.535 159.267 1.00 45.64 O
ATOM 2 P U B2630 45.398 105.216 158.379 1.00 45.23 P
ATOM 3 OP1 U B2630 44.527 104.143 158.926 1.00 45.14 O
ATOM 4 OP2 U B2630 46.859 104.971 158.254 1.00 43.02 O
ATOM 5 O5' U B2630 44.816 105.642 156.956 1.00 46.25 O
ATOM 6 C5' U B2630 44.488 104.666 155.941 1.00 46.36 C
ATOM 7 C4' U B2630 43.483 105.251 154.968 1.00 46.99 C
ATOM 8 O4' U B2630 42.265 105.569 155.686 1.00 47.65 O
ATOM 9 C3' U B2630 43.900 106.545 154.273 1.00 47.63 C
ATOM 10 O3' U B2630 43.224 106.704 153.019 1.00 48.43 O
ATOM 11 C2' U B2630 43.348 107.598 155.222 1.00 48.08 C
ATOM 12 O2' U B2630 43.152 108.844 154.590 1.00 49.69 O
ATOM 13 C1' U B2630 42.020 106.957 155.622 1.00 48.06 C
ATOM 14 N1 U B2630 41.452 107.361 156.917 1.00 49.46 N
ATOM 15 C2 U B2630 40.074 107.443 157.009 1.00 50.09 C
ATOM 16 O2 U B2630 39.333 107.236 156.070 1.00 51.52 O
ATOM 17 N3 U B2630 39.594 107.776 158.247 1.00 51.62 N
ATOM 18 C4 U B2630 40.330 108.035 159.380 1.00 52.54 C
ATOM 19 O4 U B2630 39.744 108.276 160.435 1.00 53.61 O
ATOM 20 C5 U B2630 41.748 107.953 159.204 1.00 52.21 C
ATOM 21 C6 U B2630 42.248 107.627 158.010 1.00 50.63 C
ATOM 22 P A B2631 43.164 105.487 151.962 1.00 49.60 P
ATOM 23 OP1 A B2631 44.347 104.603 152.144 1.00 49.59 O
ATOM 24 OP2 A B2631 42.894 106.084 150.629 1.00 50.84 O
ATOM 25 O5' A B2631 41.860 104.683 152.400 1.00 49.17 O
TER
Atoms:
C4: (42.318,109.160,162.927)
N3: (40.966,109.271,162.679)
OP1: (43.898,110.917,170.092)
OP2: (44.829,109.977,167.896)
C2: (40.020,109.838,163.488)
C1': (39.520,110.879,165.640)
C3': (39.747,109.615,167.608)
O5': (42.424,110.608,168.111)
O4': (40.212,111.667,166.596)
C5': (41.325,111.301,168.705)
P: (43.904,110.894,168.608)
C4': (40.071,111.065,167.911)
C2': (38.821,109.760,166.417)
O2': (37.527,110.162,166.820)
N1: (40.499,110.331,164.689)
O4: (43.039,108.590,162.101)
O2: (38.851,109.900,163.162)
C6: (41.844,110.279,164.988)
C5: (42.744,109.726,164.172)
O3': (39.126,108.937,168.685)
N3: (40.966,109.271,162.679)
OP1: (43.898,110.917,170.092)
OP2: (44.829,109.977,167.896)
C2: (40.020,109.838,163.488)
C1': (39.520,110.879,165.640)
C3': (39.747,109.615,167.608)
O5': (42.424,110.608,168.111)
O4': (40.212,111.667,166.596)
C5': (41.325,111.301,168.705)
P: (43.904,110.894,168.608)
C4': (40.071,111.065,167.911)
C2': (38.821,109.760,166.417)
O2': (37.527,110.162,166.820)
N1: (40.499,110.331,164.689)
O4: (43.039,108.590,162.101)
O2: (38.851,109.900,163.162)
C6: (41.844,110.279,164.988)
C5: (42.744,109.726,164.172)
O3': (39.126,108.937,168.685)
C4: (40.330,108.035,159.380)
N3: (39.594,107.776,158.247)
OP1: (44.527,104.143,158.926)
OP2: (46.859,104.971,158.254)
C2: (40.074,107.443,157.009)
C1': (42.020,106.957,155.622)
C3': (43.900,106.545,154.273)
O5': (44.816,105.642,156.956)
O4': (42.265,105.569,155.686)
C5': (44.488,104.666,155.941)
P: (45.398,105.216,158.379)
C4': (43.483,105.251,154.968)
C2': (43.348,107.598,155.222)
O2': (43.152,108.844,154.590)
N1: (41.452,107.361,156.917)
O4: (39.744,108.276,160.435)
O2: (39.333,107.236,156.070)
C6: (42.248,107.627,158.010)
C5: (41.748,107.953,159.204)
O3': (43.224,106.704,153.019)
N3: (39.594,107.776,158.247)
OP1: (44.527,104.143,158.926)
OP2: (46.859,104.971,158.254)
C2: (40.074,107.443,157.009)
C1': (42.020,106.957,155.622)
C3': (43.900,106.545,154.273)
O5': (44.816,105.642,156.956)
O4': (42.265,105.569,155.686)
C5': (44.488,104.666,155.941)
P: (45.398,105.216,158.379)
C4': (43.483,105.251,154.968)
C2': (43.348,107.598,155.222)
O2': (43.152,108.844,154.590)
N1: (41.452,107.361,156.917)
O4: (39.744,108.276,160.435)
O2: (39.333,107.236,156.070)
C6: (42.248,107.627,158.010)
C5: (41.748,107.953,159.204)
O3': (43.224,106.704,153.019)
Image (generated by PyMOL):