Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DUQ:E5:F7
Extra
PDB:
ATOM 1 O3' G A 4 25.008 44.011 27.324 1.00 35.08 O
ATOM 2 P G A 5 24.137 42.989 26.424 1.00 37.49 P
ATOM 3 OP1 G A 5 24.771 43.139 25.088 1.00 36.32 O
ATOM 4 OP2 G A 5 22.686 43.225 26.568 1.00 42.05 O
ATOM 5 O5' G A 5 24.387 41.580 27.102 1.00 36.48 O
ATOM 6 C5' G A 5 25.665 41.229 27.622 1.00 32.17 C
ATOM 7 C4' G A 5 25.544 40.019 28.530 1.00 27.55 C
ATOM 8 O4' G A 5 25.105 40.417 29.857 1.00 30.54 O
ATOM 9 C3' G A 5 24.554 38.929 28.114 1.00 32.08 C
ATOM 10 O3' G A 5 25.088 38.040 27.126 1.00 35.31 O
ATOM 11 C2' G A 5 24.341 38.204 29.441 1.00 34.82 C
ATOM 12 O2' G A 5 25.384 37.330 29.772 1.00 30.52 O
ATOM 13 C1' G A 5 24.335 39.370 30.436 1.00 29.26 C
ATOM 14 N9 G A 5 22.974 39.865 30.617 1.00 32.23 N
ATOM 15 C8 G A 5 22.392 40.923 29.963 1.00 27.38 C
ATOM 16 N7 G A 5 21.152 41.131 30.327 1.00 34.47 N
ATOM 17 C5 G A 5 20.902 40.156 31.283 1.00 29.93 C
ATOM 18 C6 G A 5 19.725 39.903 32.053 1.00 22.20 C
ATOM 19 O6 G A 5 18.656 40.540 32.045 1.00 34.69 O
ATOM 20 N1 G A 5 19.885 38.793 32.895 1.00 20.02 N
ATOM 21 C2 G A 5 21.050 38.036 32.993 1.00 35.35 C
ATOM 22 N2 G A 5 21.033 36.988 33.857 1.00 15.29 N
ATOM 23 N3 G A 5 22.162 38.290 32.293 1.00 26.70 N
ATOM 24 C4 G A 5 22.014 39.356 31.469 1.00 32.05 C
ATOM 25 P C A 6 24.121 37.375 26.006 1.00 34.22 P
ATOM 26 OP1 C A 6 24.979 36.923 24.897 1.00 36.00 O
ATOM 27 OP2 C A 6 22.974 38.273 25.724 1.00 38.08 O
ATOM 28 O5' C A 6 23.492 36.098 26.705 1.00 38.09 O
TER
ATOM 1 O3' G B 6 12.369 33.802 38.553 1.00 24.07 O
ATOM 2 P G B 7 13.302 34.370 39.741 1.00 29.42 P
ATOM 3 OP1 G B 7 12.940 33.816 41.058 1.00 31.54 O
ATOM 4 OP2 G B 7 13.289 35.826 39.528 1.00 30.11 O
ATOM 5 O5' G B 7 14.766 33.812 39.376 1.00 33.72 O
ATOM 6 C5' G B 7 15.060 32.386 39.295 1.00 28.58 C
ATOM 7 C4' G B 7 16.492 32.203 38.812 1.00 17.22 C
ATOM 8 O4' G B 7 16.613 32.925 37.565 1.00 33.82 O
ATOM 9 C3' G B 7 17.502 32.822 39.812 1.00 33.04 C
ATOM 10 O3' G B 7 18.640 31.957 39.960 1.00 33.09 O
ATOM 11 C2' G B 7 18.142 34.003 39.064 1.00 29.14 C
ATOM 12 O2' G B 7 19.553 34.085 39.168 1.00 33.80 O
ATOM 13 C1' G B 7 17.789 33.681 37.616 1.00 26.33 C
ATOM 14 N9 G B 7 17.799 34.746 36.636 1.00 22.71 N
ATOM 15 C8 G B 7 18.726 34.892 35.642 1.00 28.25 C
ATOM 16 N7 G B 7 18.610 36.012 34.996 1.00 19.01 N
ATOM 17 C5 G B 7 17.521 36.628 35.584 1.00 22.31 C
ATOM 18 C6 G B 7 16.955 37.868 35.314 1.00 24.33 C
ATOM 19 O6 G B 7 17.348 38.712 34.492 1.00 36.53 O
ATOM 20 N1 G B 7 15.835 38.108 36.115 1.00 22.36 N
ATOM 21 C2 G B 7 15.365 37.225 37.075 1.00 37.59 C
ATOM 22 N2 G B 7 14.296 37.591 37.780 1.00 31.09 N
ATOM 23 N3 G B 7 15.917 36.056 37.334 1.00 28.70 N
ATOM 24 C4 G B 7 16.981 35.831 36.564 1.00 26.85 C
ATOM 25 P U B 8 18.702 30.784 41.034 1.00 37.33 P
ATOM 26 OP1 U B 8 19.644 29.809 40.424 1.00 40.21 O
ATOM 27 OP2 U B 8 17.351 30.347 41.461 1.00 44.01 O
ATOM 28 O5' U B 8 19.486 31.364 42.280 1.00 30.12 O
TER
ATOM 2 P G A 5 24.137 42.989 26.424 1.00 37.49 P
ATOM 3 OP1 G A 5 24.771 43.139 25.088 1.00 36.32 O
ATOM 4 OP2 G A 5 22.686 43.225 26.568 1.00 42.05 O
ATOM 5 O5' G A 5 24.387 41.580 27.102 1.00 36.48 O
ATOM 6 C5' G A 5 25.665 41.229 27.622 1.00 32.17 C
ATOM 7 C4' G A 5 25.544 40.019 28.530 1.00 27.55 C
ATOM 8 O4' G A 5 25.105 40.417 29.857 1.00 30.54 O
ATOM 9 C3' G A 5 24.554 38.929 28.114 1.00 32.08 C
ATOM 10 O3' G A 5 25.088 38.040 27.126 1.00 35.31 O
ATOM 11 C2' G A 5 24.341 38.204 29.441 1.00 34.82 C
ATOM 12 O2' G A 5 25.384 37.330 29.772 1.00 30.52 O
ATOM 13 C1' G A 5 24.335 39.370 30.436 1.00 29.26 C
ATOM 14 N9 G A 5 22.974 39.865 30.617 1.00 32.23 N
ATOM 15 C8 G A 5 22.392 40.923 29.963 1.00 27.38 C
ATOM 16 N7 G A 5 21.152 41.131 30.327 1.00 34.47 N
ATOM 17 C5 G A 5 20.902 40.156 31.283 1.00 29.93 C
ATOM 18 C6 G A 5 19.725 39.903 32.053 1.00 22.20 C
ATOM 19 O6 G A 5 18.656 40.540 32.045 1.00 34.69 O
ATOM 20 N1 G A 5 19.885 38.793 32.895 1.00 20.02 N
ATOM 21 C2 G A 5 21.050 38.036 32.993 1.00 35.35 C
ATOM 22 N2 G A 5 21.033 36.988 33.857 1.00 15.29 N
ATOM 23 N3 G A 5 22.162 38.290 32.293 1.00 26.70 N
ATOM 24 C4 G A 5 22.014 39.356 31.469 1.00 32.05 C
ATOM 25 P C A 6 24.121 37.375 26.006 1.00 34.22 P
ATOM 26 OP1 C A 6 24.979 36.923 24.897 1.00 36.00 O
ATOM 27 OP2 C A 6 22.974 38.273 25.724 1.00 38.08 O
ATOM 28 O5' C A 6 23.492 36.098 26.705 1.00 38.09 O
TER
ATOM 1 O3' G B 6 12.369 33.802 38.553 1.00 24.07 O
ATOM 2 P G B 7 13.302 34.370 39.741 1.00 29.42 P
ATOM 3 OP1 G B 7 12.940 33.816 41.058 1.00 31.54 O
ATOM 4 OP2 G B 7 13.289 35.826 39.528 1.00 30.11 O
ATOM 5 O5' G B 7 14.766 33.812 39.376 1.00 33.72 O
ATOM 6 C5' G B 7 15.060 32.386 39.295 1.00 28.58 C
ATOM 7 C4' G B 7 16.492 32.203 38.812 1.00 17.22 C
ATOM 8 O4' G B 7 16.613 32.925 37.565 1.00 33.82 O
ATOM 9 C3' G B 7 17.502 32.822 39.812 1.00 33.04 C
ATOM 10 O3' G B 7 18.640 31.957 39.960 1.00 33.09 O
ATOM 11 C2' G B 7 18.142 34.003 39.064 1.00 29.14 C
ATOM 12 O2' G B 7 19.553 34.085 39.168 1.00 33.80 O
ATOM 13 C1' G B 7 17.789 33.681 37.616 1.00 26.33 C
ATOM 14 N9 G B 7 17.799 34.746 36.636 1.00 22.71 N
ATOM 15 C8 G B 7 18.726 34.892 35.642 1.00 28.25 C
ATOM 16 N7 G B 7 18.610 36.012 34.996 1.00 19.01 N
ATOM 17 C5 G B 7 17.521 36.628 35.584 1.00 22.31 C
ATOM 18 C6 G B 7 16.955 37.868 35.314 1.00 24.33 C
ATOM 19 O6 G B 7 17.348 38.712 34.492 1.00 36.53 O
ATOM 20 N1 G B 7 15.835 38.108 36.115 1.00 22.36 N
ATOM 21 C2 G B 7 15.365 37.225 37.075 1.00 37.59 C
ATOM 22 N2 G B 7 14.296 37.591 37.780 1.00 31.09 N
ATOM 23 N3 G B 7 15.917 36.056 37.334 1.00 28.70 N
ATOM 24 C4 G B 7 16.981 35.831 36.564 1.00 26.85 C
ATOM 25 P U B 8 18.702 30.784 41.034 1.00 37.33 P
ATOM 26 OP1 U B 8 19.644 29.809 40.424 1.00 40.21 O
ATOM 27 OP2 U B 8 17.351 30.347 41.461 1.00 44.01 O
ATOM 28 O5' U B 8 19.486 31.364 42.280 1.00 30.12 O
TER
Atoms:
OP1: (24.771,43.139,25.088)
OP2: (22.686,43.225,26.568)
C3': (24.554,38.929,28.114)
C1': (24.335,39.370,30.436)
C5': (25.665,41.229,27.622)
O6: (18.656,40.540,32.045)
O4': (25.105,40.417,29.857)
C8: (22.392,40.923,29.963)
C2: (21.050,38.036,32.993)
C6: (19.725,39.903,32.053)
C5: (20.902,40.156,31.283)
C4: (22.014,39.356,31.469)
P: (24.137,42.989,26.424)
C4': (25.544,40.019,28.530)
C2': (24.341,38.204,29.441)
O2': (25.384,37.330,29.772)
N1: (19.885,38.793,32.895)
N2: (21.033,36.988,33.857)
N3: (22.162,38.290,32.293)
N7: (21.152,41.131,30.327)
N9: (22.974,39.865,30.617)
O5': (24.387,41.580,27.102)
O3': (25.088,38.040,27.126)
OP2: (22.686,43.225,26.568)
C3': (24.554,38.929,28.114)
C1': (24.335,39.370,30.436)
C5': (25.665,41.229,27.622)
O6: (18.656,40.540,32.045)
O4': (25.105,40.417,29.857)
C8: (22.392,40.923,29.963)
C2: (21.050,38.036,32.993)
C6: (19.725,39.903,32.053)
C5: (20.902,40.156,31.283)
C4: (22.014,39.356,31.469)
P: (24.137,42.989,26.424)
C4': (25.544,40.019,28.530)
C2': (24.341,38.204,29.441)
O2': (25.384,37.330,29.772)
N1: (19.885,38.793,32.895)
N2: (21.033,36.988,33.857)
N3: (22.162,38.290,32.293)
N7: (21.152,41.131,30.327)
N9: (22.974,39.865,30.617)
O5': (24.387,41.580,27.102)
O3': (25.088,38.040,27.126)
OP1: (12.940,33.816,41.058)
OP2: (13.289,35.826,39.528)
C3': (17.502,32.822,39.812)
C1': (17.789,33.681,37.616)
C5': (15.060,32.386,39.295)
O6: (17.348,38.712,34.492)
O4': (16.613,32.925,37.565)
C8: (18.726,34.892,35.642)
C2: (15.365,37.225,37.075)
C6: (16.955,37.868,35.314)
C5: (17.521,36.628,35.584)
C4: (16.981,35.831,36.564)
P: (13.302,34.370,39.741)
C4': (16.492,32.203,38.812)
C2': (18.142,34.003,39.064)
O2': (19.553,34.085,39.168)
N1: (15.835,38.108,36.115)
N2: (14.296,37.591,37.780)
N3: (15.917,36.056,37.334)
N7: (18.610,36.012,34.996)
N9: (17.799,34.746,36.636)
O5': (14.766,33.812,39.376)
O3': (18.640,31.957,39.960)
OP2: (13.289,35.826,39.528)
C3': (17.502,32.822,39.812)
C1': (17.789,33.681,37.616)
C5': (15.060,32.386,39.295)
O6: (17.348,38.712,34.492)
O4': (16.613,32.925,37.565)
C8: (18.726,34.892,35.642)
C2: (15.365,37.225,37.075)
C6: (16.955,37.868,35.314)
C5: (17.521,36.628,35.584)
C4: (16.981,35.831,36.564)
P: (13.302,34.370,39.741)
C4': (16.492,32.203,38.812)
C2': (18.142,34.003,39.064)
O2': (19.553,34.085,39.168)
N1: (15.835,38.108,36.115)
N2: (14.296,37.591,37.780)
N3: (15.917,36.056,37.334)
N7: (18.610,36.012,34.996)
N9: (17.799,34.746,36.636)
O5': (14.766,33.812,39.376)
O3': (18.640,31.957,39.960)
Image (generated by PyMOL):