ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A731:A690

Extra

PDB:
ATOM 1 O3' G A 730 42.914 67.540 47.941 1.00 55.98 O
ATOM 2 P G A 731 41.482 67.368 48.661 1.00 57.26 P
ATOM 3 OP1 G A 731 40.654 68.582 48.363 1.00 54.78 O
ATOM 4 OP2 G A 731 41.714 66.968 50.069 1.00 57.09 O
ATOM 5 O5' G A 731 40.848 66.087 47.951 1.00 60.46 O
ATOM 6 C5' G A 731 40.630 66.032 46.519 1.00 61.73 C
ATOM 7 C4' G A 731 39.307 65.351 46.224 1.00 62.59 C
ATOM 8 O4' G A 731 39.300 64.009 46.789 1.00 64.90 O
ATOM 9 C3' G A 731 38.101 66.008 46.871 1.00 62.65 C
ATOM 10 O3' G A 731 37.671 67.086 46.082 1.00 59.05 O
ATOM 11 C2' G A 731 37.080 64.877 46.924 1.00 64.54 C
ATOM 12 O2' G A 731 36.426 64.666 45.683 1.00 67.65 O
ATOM 13 C1' G A 731 37.985 63.680 47.230 1.00 65.90 C
ATOM 14 N9 G A 731 38.056 63.307 48.642 1.00 67.96 N
ATOM 15 C8 G A 731 38.010 64.134 49.741 1.00 68.75 C
ATOM 16 N7 G A 731 38.119 63.489 50.871 1.00 69.36 N
ATOM 17 C5 G A 731 38.241 62.160 50.495 1.00 69.33 C
ATOM 18 C6 G A 731 38.406 60.997 51.280 1.00 69.63 C
ATOM 19 O6 G A 731 38.483 60.904 52.504 1.00 70.70 O
ATOM 20 N1 G A 731 38.490 59.855 50.494 1.00 70.13 N
ATOM 21 C2 G A 731 38.427 59.832 49.122 1.00 70.26 C
ATOM 22 N2 G A 731 38.515 58.625 48.545 1.00 70.82 N
ATOM 23 N3 G A 731 38.286 60.913 48.374 1.00 70.22 N
ATOM 24 C4 G A 731 38.198 62.033 49.123 1.00 69.15 C
ATOM 25 P G A 732 36.568 68.079 46.657 1.00 58.01 P
ATOM 26 OP1 G A 732 36.867 68.254 48.113 1.00 58.24 O
ATOM 27 OP2 G A 732 35.257 67.550 46.243 1.00 58.83 O
ATOM 28 O5' G A 732 36.821 69.435 45.855 1.00 59.14 O
TER

ATOM 1 O3' U B 689 34.986 55.995 46.018 1.00 73.73 O
ATOM 2 P G B 690 34.449 54.562 45.592 1.00 74.78 P
ATOM 3 OP1 G B 690 35.384 54.102 44.521 1.00 74.09 O
ATOM 4 OP2 G B 690 32.987 54.670 45.306 1.00 74.01 O
ATOM 5 O5' G B 690 34.664 53.680 46.895 1.00 73.62 O
ATOM 6 C5' G B 690 34.933 52.277 46.773 1.00 73.49 C
ATOM 7 C4' G B 690 35.491 51.743 48.059 1.00 73.12 C
ATOM 8 O4' G B 690 36.844 52.235 48.264 1.00 72.99 O
ATOM 9 C3' G B 690 34.762 52.172 49.318 1.00 72.10 C
ATOM 10 O3' G B 690 33.534 51.478 49.498 1.00 72.59 O
ATOM 11 C2' G B 690 35.818 51.891 50.377 1.00 72.60 C
ATOM 12 O2' G B 690 35.967 50.526 50.707 1.00 72.46 O
ATOM 13 C1' G B 690 37.080 52.379 49.656 1.00 73.26 C
ATOM 14 N9 G B 690 37.305 53.788 49.968 1.00 74.01 N
ATOM 15 C8 G B 690 37.142 54.891 49.159 1.00 74.71 C
ATOM 16 N7 G B 690 37.365 56.016 49.782 1.00 74.70 N
ATOM 17 C5 G B 690 37.708 55.630 51.072 1.00 74.36 C
ATOM 18 C6 G B 690 38.050 56.405 52.213 1.00 74.50 C
ATOM 19 O6 G B 690 38.116 57.636 52.321 1.00 74.84 O
ATOM 20 N1 G B 690 38.330 55.598 53.312 1.00 73.12 N
ATOM 21 C2 G B 690 38.286 54.227 53.320 1.00 71.91 C
ATOM 22 N2 G B 690 38.582 53.629 54.475 1.00 69.93 N
ATOM 23 N3 G B 690 37.970 53.500 52.273 1.00 72.68 N
ATOM 24 C4 G B 690 37.693 54.260 51.192 1.00 73.75 C
ATOM 25 P G B 691 32.397 52.089 50.471 1.00 71.34 P
ATOM 26 OP1 G B 691 31.204 51.218 50.376 1.00 71.68 O
ATOM 27 OP2 G B 691 32.243 53.552 50.286 1.00 72.34 O
ATOM 28 O5' G B 691 33.000 51.830 51.912 1.00 71.24 O
TER

Atoms:
OP1: (40.654,68.582,48.363)
OP2: (41.714,66.968,50.069)
C3': (38.101,66.008,46.871)
C1': (37.985,63.680,47.230)
C5': (40.630,66.032,46.519)
O6: (38.483,60.904,52.504)
O4': (39.300,64.009,46.789)
C8: (38.010,64.134,49.741)
C2: (38.427,59.832,49.122)
C6: (38.406,60.997,51.280)
C5: (38.241,62.160,50.495)
C4: (38.198,62.033,49.123)
P: (41.482,67.368,48.661)
C4': (39.307,65.351,46.224)
C2': (37.080,64.877,46.924)
O2': (36.426,64.666,45.683)
N1: (38.490,59.855,50.494)
N2: (38.515,58.625,48.545)
N3: (38.286,60.913,48.374)
N7: (38.119,63.489,50.871)
N9: (38.056,63.307,48.642)
O5': (40.848,66.087,47.951)
O3': (37.671,67.086,46.082)
OP1: (35.384,54.102,44.521)
OP2: (32.987,54.670,45.306)
C3': (34.762,52.172,49.318)
C1': (37.080,52.379,49.656)
C5': (34.933,52.277,46.773)
O6: (38.116,57.636,52.321)
O4': (36.844,52.235,48.264)
C8: (37.142,54.891,49.159)
C2: (38.286,54.227,53.320)
C6: (38.050,56.405,52.213)
C5: (37.708,55.630,51.072)
C4: (37.693,54.260,51.192)
P: (34.449,54.562,45.592)
C4': (35.491,51.743,48.059)
C2': (35.818,51.891,50.377)
O2': (35.967,50.526,50.707)
N1: (38.330,55.598,53.312)
N2: (38.582,53.629,54.475)
N3: (37.970,53.500,52.273)
N7: (37.365,56.016,49.782)
N9: (37.305,53.788,49.968)
O5': (34.664,53.680,46.895)
O3': (33.534,51.478,49.498)
Image (generated by PyMOL):
PyMOL image
show in jmol