Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A46:A74
Extra
PDB:
ATOM 1 O3' U A 45 55.483 165.457 36.124 1.00 51.51 O
ATOM 2 P G A 46 54.497 166.450 36.917 1.00 52.73 P
ATOM 3 OP1 G A 46 54.135 167.585 36.030 1.00 53.52 O
ATOM 4 OP2 G A 46 55.078 166.719 38.244 1.00 53.51 O
ATOM 5 O5' G A 46 53.169 165.597 37.088 1.00 52.22 O
ATOM 6 C5' G A 46 52.434 165.176 35.935 1.00 52.00 C
ATOM 7 C4' G A 46 50.971 165.224 36.216 1.00 53.16 C
ATOM 8 O4' G A 46 50.628 164.135 37.104 1.00 53.98 O
ATOM 9 C3' G A 46 50.465 166.500 36.875 1.00 53.39 C
ATOM 10 O3' G A 46 49.200 166.789 36.317 1.00 51.94 O
ATOM 11 C2' G A 46 50.287 166.079 38.331 1.00 54.19 C
ATOM 12 O2' G A 46 49.271 166.818 38.974 1.00 54.98 O
ATOM 13 C1' G A 46 49.836 164.632 38.153 1.00 55.06 C
ATOM 14 N9 G A 46 50.005 163.740 39.289 1.00 56.01 N
ATOM 15 C8 G A 46 50.787 163.924 40.399 1.00 55.75 C
ATOM 16 N7 G A 46 50.711 162.937 41.245 1.00 55.77 N
ATOM 17 C5 G A 46 49.823 162.049 40.656 1.00 56.22 C
ATOM 18 C6 G A 46 49.333 160.805 41.108 1.00 56.02 C
ATOM 19 O6 G A 46 49.564 160.227 42.173 1.00 55.55 O
ATOM 20 N1 G A 46 48.473 160.229 40.180 1.00 56.24 N
ATOM 21 C2 G A 46 48.113 160.788 38.980 1.00 56.11 C
ATOM 22 N2 G A 46 47.287 160.070 38.211 1.00 56.07 N
ATOM 23 N3 G A 46 48.537 161.961 38.565 1.00 56.17 N
ATOM 24 C4 G A 46 49.389 162.528 39.443 1.00 56.36 C
ATOM 25 P C A 47 48.965 168.192 35.619 1.00 49.77 P
ATOM 26 OP1 C A 47 47.655 168.039 34.949 1.00 49.60 O
ATOM 27 OP2 C A 47 50.178 168.523 34.814 1.00 48.39 O
ATOM 28 O5' C A 47 48.843 169.200 36.846 1.00 50.67 O
TER
ATOM 1 O3' C B 73 41.830 160.540 34.725 1.00 49.50 O
ATOM 2 P G B 74 41.598 159.947 36.221 1.00 51.36 P
ATOM 3 OP1 G B 74 40.161 159.875 36.589 1.00 49.33 O
ATOM 4 OP2 G B 74 42.545 160.630 37.134 1.00 52.28 O
ATOM 5 O5' G B 74 42.111 158.448 36.108 1.00 53.00 O
ATOM 6 C5' G B 74 41.464 157.489 35.249 1.00 55.29 C
ATOM 7 C4' G B 74 41.766 156.087 35.732 1.00 56.30 C
ATOM 8 O4' G B 74 43.191 155.830 35.623 1.00 55.44 O
ATOM 9 C3' G B 74 41.450 155.880 37.201 1.00 57.32 C
ATOM 10 O3' G B 74 40.079 155.556 37.384 1.00 60.93 O
ATOM 11 C2' G B 74 42.398 154.758 37.587 1.00 56.60 C
ATOM 12 O2' G B 74 41.928 153.493 37.180 1.00 57.02 O
ATOM 13 C1' G B 74 43.641 155.116 36.765 1.00 56.52 C
ATOM 14 N9 G B 74 44.586 155.963 37.494 1.00 56.64 N
ATOM 15 C8 G B 74 44.853 157.284 37.255 1.00 57.44 C
ATOM 16 N7 G B 74 45.711 157.796 38.092 1.00 57.56 N
ATOM 17 C5 G B 74 46.036 156.750 38.936 1.00 57.62 C
ATOM 18 C6 G B 74 46.917 156.709 40.052 1.00 57.56 C
ATOM 19 O6 G B 74 47.589 157.622 40.536 1.00 58.21 O
ATOM 20 N1 G B 74 46.968 155.443 40.616 1.00 56.92 N
ATOM 21 C2 G B 74 46.265 154.355 40.167 1.00 56.54 C
ATOM 22 N2 G B 74 46.455 153.211 40.845 1.00 57.04 N
ATOM 23 N3 G B 74 45.436 154.381 39.130 1.00 56.47 N
ATOM 24 C4 G B 74 45.367 155.603 38.570 1.00 56.63 C
ATOM 25 P C B 75 39.372 155.855 38.793 1.00 63.84 P
ATOM 26 OP1 C B 75 37.960 155.416 38.695 1.00 65.11 O
ATOM 27 OP2 C B 75 39.670 157.258 39.171 1.00 64.81 O
ATOM 28 O5' C B 75 40.105 154.855 39.793 1.00 65.27 O
TER
ATOM 2 P G A 46 54.497 166.450 36.917 1.00 52.73 P
ATOM 3 OP1 G A 46 54.135 167.585 36.030 1.00 53.52 O
ATOM 4 OP2 G A 46 55.078 166.719 38.244 1.00 53.51 O
ATOM 5 O5' G A 46 53.169 165.597 37.088 1.00 52.22 O
ATOM 6 C5' G A 46 52.434 165.176 35.935 1.00 52.00 C
ATOM 7 C4' G A 46 50.971 165.224 36.216 1.00 53.16 C
ATOM 8 O4' G A 46 50.628 164.135 37.104 1.00 53.98 O
ATOM 9 C3' G A 46 50.465 166.500 36.875 1.00 53.39 C
ATOM 10 O3' G A 46 49.200 166.789 36.317 1.00 51.94 O
ATOM 11 C2' G A 46 50.287 166.079 38.331 1.00 54.19 C
ATOM 12 O2' G A 46 49.271 166.818 38.974 1.00 54.98 O
ATOM 13 C1' G A 46 49.836 164.632 38.153 1.00 55.06 C
ATOM 14 N9 G A 46 50.005 163.740 39.289 1.00 56.01 N
ATOM 15 C8 G A 46 50.787 163.924 40.399 1.00 55.75 C
ATOM 16 N7 G A 46 50.711 162.937 41.245 1.00 55.77 N
ATOM 17 C5 G A 46 49.823 162.049 40.656 1.00 56.22 C
ATOM 18 C6 G A 46 49.333 160.805 41.108 1.00 56.02 C
ATOM 19 O6 G A 46 49.564 160.227 42.173 1.00 55.55 O
ATOM 20 N1 G A 46 48.473 160.229 40.180 1.00 56.24 N
ATOM 21 C2 G A 46 48.113 160.788 38.980 1.00 56.11 C
ATOM 22 N2 G A 46 47.287 160.070 38.211 1.00 56.07 N
ATOM 23 N3 G A 46 48.537 161.961 38.565 1.00 56.17 N
ATOM 24 C4 G A 46 49.389 162.528 39.443 1.00 56.36 C
ATOM 25 P C A 47 48.965 168.192 35.619 1.00 49.77 P
ATOM 26 OP1 C A 47 47.655 168.039 34.949 1.00 49.60 O
ATOM 27 OP2 C A 47 50.178 168.523 34.814 1.00 48.39 O
ATOM 28 O5' C A 47 48.843 169.200 36.846 1.00 50.67 O
TER
ATOM 1 O3' C B 73 41.830 160.540 34.725 1.00 49.50 O
ATOM 2 P G B 74 41.598 159.947 36.221 1.00 51.36 P
ATOM 3 OP1 G B 74 40.161 159.875 36.589 1.00 49.33 O
ATOM 4 OP2 G B 74 42.545 160.630 37.134 1.00 52.28 O
ATOM 5 O5' G B 74 42.111 158.448 36.108 1.00 53.00 O
ATOM 6 C5' G B 74 41.464 157.489 35.249 1.00 55.29 C
ATOM 7 C4' G B 74 41.766 156.087 35.732 1.00 56.30 C
ATOM 8 O4' G B 74 43.191 155.830 35.623 1.00 55.44 O
ATOM 9 C3' G B 74 41.450 155.880 37.201 1.00 57.32 C
ATOM 10 O3' G B 74 40.079 155.556 37.384 1.00 60.93 O
ATOM 11 C2' G B 74 42.398 154.758 37.587 1.00 56.60 C
ATOM 12 O2' G B 74 41.928 153.493 37.180 1.00 57.02 O
ATOM 13 C1' G B 74 43.641 155.116 36.765 1.00 56.52 C
ATOM 14 N9 G B 74 44.586 155.963 37.494 1.00 56.64 N
ATOM 15 C8 G B 74 44.853 157.284 37.255 1.00 57.44 C
ATOM 16 N7 G B 74 45.711 157.796 38.092 1.00 57.56 N
ATOM 17 C5 G B 74 46.036 156.750 38.936 1.00 57.62 C
ATOM 18 C6 G B 74 46.917 156.709 40.052 1.00 57.56 C
ATOM 19 O6 G B 74 47.589 157.622 40.536 1.00 58.21 O
ATOM 20 N1 G B 74 46.968 155.443 40.616 1.00 56.92 N
ATOM 21 C2 G B 74 46.265 154.355 40.167 1.00 56.54 C
ATOM 22 N2 G B 74 46.455 153.211 40.845 1.00 57.04 N
ATOM 23 N3 G B 74 45.436 154.381 39.130 1.00 56.47 N
ATOM 24 C4 G B 74 45.367 155.603 38.570 1.00 56.63 C
ATOM 25 P C B 75 39.372 155.855 38.793 1.00 63.84 P
ATOM 26 OP1 C B 75 37.960 155.416 38.695 1.00 65.11 O
ATOM 27 OP2 C B 75 39.670 157.258 39.171 1.00 64.81 O
ATOM 28 O5' C B 75 40.105 154.855 39.793 1.00 65.27 O
TER
Atoms:
OP1: (54.135,167.585,36.030)
OP2: (55.078,166.719,38.244)
C3': (50.465,166.500,36.875)
C1': (49.836,164.632,38.153)
C5': (52.434,165.176,35.935)
O6: (49.564,160.227,42.173)
O4': (50.628,164.135,37.104)
C8: (50.787,163.924,40.399)
C2: (48.113,160.788,38.980)
C6: (49.333,160.805,41.108)
C5: (49.823,162.049,40.656)
C4: (49.389,162.528,39.443)
P: (54.497,166.450,36.917)
C4': (50.971,165.224,36.216)
C2': (50.287,166.079,38.331)
O2': (49.271,166.818,38.974)
N1: (48.473,160.229,40.180)
N2: (47.287,160.070,38.211)
N3: (48.537,161.961,38.565)
N7: (50.711,162.937,41.245)
N9: (50.005,163.740,39.289)
O5': (53.169,165.597,37.088)
O3': (49.200,166.789,36.317)
OP2: (55.078,166.719,38.244)
C3': (50.465,166.500,36.875)
C1': (49.836,164.632,38.153)
C5': (52.434,165.176,35.935)
O6: (49.564,160.227,42.173)
O4': (50.628,164.135,37.104)
C8: (50.787,163.924,40.399)
C2: (48.113,160.788,38.980)
C6: (49.333,160.805,41.108)
C5: (49.823,162.049,40.656)
C4: (49.389,162.528,39.443)
P: (54.497,166.450,36.917)
C4': (50.971,165.224,36.216)
C2': (50.287,166.079,38.331)
O2': (49.271,166.818,38.974)
N1: (48.473,160.229,40.180)
N2: (47.287,160.070,38.211)
N3: (48.537,161.961,38.565)
N7: (50.711,162.937,41.245)
N9: (50.005,163.740,39.289)
O5': (53.169,165.597,37.088)
O3': (49.200,166.789,36.317)
OP1: (40.161,159.875,36.589)
OP2: (42.545,160.630,37.134)
C3': (41.450,155.880,37.201)
C1': (43.641,155.116,36.765)
C5': (41.464,157.489,35.249)
O6: (47.589,157.622,40.536)
O4': (43.191,155.830,35.623)
C8: (44.853,157.284,37.255)
C2: (46.265,154.355,40.167)
C6: (46.917,156.709,40.052)
C5: (46.036,156.750,38.936)
C4: (45.367,155.603,38.570)
P: (41.598,159.947,36.221)
C4': (41.766,156.087,35.732)
C2': (42.398,154.758,37.587)
O2': (41.928,153.493,37.180)
N1: (46.968,155.443,40.616)
N2: (46.455,153.211,40.845)
N3: (45.436,154.381,39.130)
N7: (45.711,157.796,38.092)
N9: (44.586,155.963,37.494)
O5': (42.111,158.448,36.108)
O3': (40.079,155.556,37.384)
OP2: (42.545,160.630,37.134)
C3': (41.450,155.880,37.201)
C1': (43.641,155.116,36.765)
C5': (41.464,157.489,35.249)
O6: (47.589,157.622,40.536)
O4': (43.191,155.830,35.623)
C8: (44.853,157.284,37.255)
C2: (46.265,154.355,40.167)
C6: (46.917,156.709,40.052)
C5: (46.036,156.750,38.936)
C4: (45.367,155.603,38.570)
P: (41.598,159.947,36.221)
C4': (41.766,156.087,35.732)
C2': (42.398,154.758,37.587)
O2': (41.928,153.493,37.180)
N1: (46.968,155.443,40.616)
N2: (46.455,153.211,40.845)
N3: (45.436,154.381,39.130)
N7: (45.711,157.796,38.092)
N9: (44.586,155.963,37.494)
O5': (42.111,158.448,36.108)
O3': (40.079,155.556,37.384)
Image (generated by PyMOL):