Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A731:A690
Extra
PDB:
ATOM 1 O3' G A 730 42.835 67.830 47.871 1.00 59.94 O
ATOM 2 P G A 731 41.422 67.703 48.618 1.00 60.40 P
ATOM 3 OP1 G A 731 40.564 68.902 48.339 1.00 58.32 O
ATOM 4 OP2 G A 731 41.711 67.321 50.016 1.00 60.20 O
ATOM 5 O5' G A 731 40.771 66.418 47.943 1.00 62.45 O
ATOM 6 C5' G A 731 40.538 66.351 46.521 1.00 62.95 C
ATOM 7 C4' G A 731 39.217 65.667 46.248 1.00 63.59 C
ATOM 8 O4' G A 731 39.212 64.329 46.817 1.00 65.87 O
ATOM 9 C3' G A 731 38.027 66.327 46.909 1.00 63.51 C
ATOM 10 O3' G A 731 37.600 67.372 46.085 1.00 61.11 O
ATOM 11 C2' G A 731 36.998 65.208 46.971 1.00 64.89 C
ATOM 12 O2' G A 731 36.324 65.041 45.738 1.00 67.29 O
ATOM 13 C1' G A 731 37.895 63.999 47.253 1.00 66.35 C
ATOM 14 N9 G A 731 37.974 63.630 48.660 1.00 68.00 N
ATOM 15 C8 G A 731 37.961 64.469 49.750 1.00 68.54 C
ATOM 16 N7 G A 731 38.077 63.833 50.883 1.00 69.45 N
ATOM 17 C5 G A 731 38.167 62.496 50.518 1.00 69.16 C
ATOM 18 C6 G A 731 38.318 61.346 51.309 1.00 68.86 C
ATOM 19 O6 G A 731 38.399 61.269 52.532 1.00 69.25 O
ATOM 20 N1 G A 731 38.377 60.194 50.534 1.00 69.48 N
ATOM 21 C2 G A 731 38.295 60.155 49.167 1.00 69.64 C
ATOM 22 N2 G A 731 38.374 58.946 48.604 1.00 69.82 N
ATOM 23 N3 G A 731 38.150 61.225 48.412 1.00 69.77 N
ATOM 24 C4 G A 731 38.097 62.356 49.150 1.00 69.09 C
ATOM 25 P G A 732 36.469 68.358 46.606 1.00 60.94 P
ATOM 26 OP1 G A 732 36.765 68.573 48.055 1.00 60.99 O
ATOM 27 OP2 G A 732 35.166 67.798 46.204 1.00 62.23 O
ATOM 28 O5' G A 732 36.731 69.680 45.760 1.00 60.58 O
TER
ATOM 1 O3' U B 689 34.859 56.287 46.042 1.00 74.12 O
ATOM 2 P G B 690 34.294 54.868 45.591 1.00 75.55 P
ATOM 3 OP1 G B 690 35.264 54.411 44.558 1.00 75.67 O
ATOM 4 OP2 G B 690 32.843 54.980 45.251 1.00 73.42 O
ATOM 5 O5' G B 690 34.462 53.973 46.894 1.00 74.46 O
ATOM 6 C5' G B 690 34.773 52.583 46.776 1.00 74.08 C
ATOM 7 C4' G B 690 35.365 52.067 48.059 1.00 73.83 C
ATOM 8 O4' G B 690 36.712 52.574 48.247 1.00 73.77 O
ATOM 9 C3' G B 690 34.647 52.481 49.331 1.00 72.65 C
ATOM 10 O3' G B 690 33.464 51.732 49.546 1.00 72.33 O
ATOM 11 C2' G B 690 35.714 52.214 50.376 1.00 73.51 C
ATOM 12 O2' G B 690 35.831 50.852 50.719 1.00 74.10 O
ATOM 13 C1' G B 690 36.966 52.696 49.638 1.00 74.59 C
ATOM 14 N9 G B 690 37.166 54.100 49.970 1.00 76.25 N
ATOM 15 C8 G B 690 36.956 55.213 49.186 1.00 77.12 C
ATOM 16 N7 G B 690 37.157 56.332 49.831 1.00 77.11 N
ATOM 17 C5 G B 690 37.542 55.929 51.106 1.00 76.61 C
ATOM 18 C6 G B 690 37.886 56.690 52.250 1.00 76.05 C
ATOM 19 O6 G B 690 37.939 57.915 52.370 1.00 75.51 O
ATOM 20 N1 G B 690 38.190 55.874 53.336 1.00 75.26 N
ATOM 21 C2 G B 690 38.168 54.503 53.324 1.00 75.80 C
ATOM 22 N2 G B 690 38.450 53.890 54.476 1.00 75.38 N
ATOM 23 N3 G B 690 37.874 53.784 52.261 1.00 76.75 N
ATOM 24 C4 G B 690 37.566 54.557 51.198 1.00 76.64 C
ATOM 25 P G B 691 32.313 52.312 50.510 1.00 71.10 P
ATOM 26 OP1 G B 691 31.152 51.399 50.424 1.00 71.45 O
ATOM 27 OP2 G B 691 32.119 53.766 50.301 1.00 72.63 O
ATOM 28 O5' G B 691 32.918 52.076 51.949 1.00 70.82 O
TER
ATOM 2 P G A 731 41.422 67.703 48.618 1.00 60.40 P
ATOM 3 OP1 G A 731 40.564 68.902 48.339 1.00 58.32 O
ATOM 4 OP2 G A 731 41.711 67.321 50.016 1.00 60.20 O
ATOM 5 O5' G A 731 40.771 66.418 47.943 1.00 62.45 O
ATOM 6 C5' G A 731 40.538 66.351 46.521 1.00 62.95 C
ATOM 7 C4' G A 731 39.217 65.667 46.248 1.00 63.59 C
ATOM 8 O4' G A 731 39.212 64.329 46.817 1.00 65.87 O
ATOM 9 C3' G A 731 38.027 66.327 46.909 1.00 63.51 C
ATOM 10 O3' G A 731 37.600 67.372 46.085 1.00 61.11 O
ATOM 11 C2' G A 731 36.998 65.208 46.971 1.00 64.89 C
ATOM 12 O2' G A 731 36.324 65.041 45.738 1.00 67.29 O
ATOM 13 C1' G A 731 37.895 63.999 47.253 1.00 66.35 C
ATOM 14 N9 G A 731 37.974 63.630 48.660 1.00 68.00 N
ATOM 15 C8 G A 731 37.961 64.469 49.750 1.00 68.54 C
ATOM 16 N7 G A 731 38.077 63.833 50.883 1.00 69.45 N
ATOM 17 C5 G A 731 38.167 62.496 50.518 1.00 69.16 C
ATOM 18 C6 G A 731 38.318 61.346 51.309 1.00 68.86 C
ATOM 19 O6 G A 731 38.399 61.269 52.532 1.00 69.25 O
ATOM 20 N1 G A 731 38.377 60.194 50.534 1.00 69.48 N
ATOM 21 C2 G A 731 38.295 60.155 49.167 1.00 69.64 C
ATOM 22 N2 G A 731 38.374 58.946 48.604 1.00 69.82 N
ATOM 23 N3 G A 731 38.150 61.225 48.412 1.00 69.77 N
ATOM 24 C4 G A 731 38.097 62.356 49.150 1.00 69.09 C
ATOM 25 P G A 732 36.469 68.358 46.606 1.00 60.94 P
ATOM 26 OP1 G A 732 36.765 68.573 48.055 1.00 60.99 O
ATOM 27 OP2 G A 732 35.166 67.798 46.204 1.00 62.23 O
ATOM 28 O5' G A 732 36.731 69.680 45.760 1.00 60.58 O
TER
ATOM 1 O3' U B 689 34.859 56.287 46.042 1.00 74.12 O
ATOM 2 P G B 690 34.294 54.868 45.591 1.00 75.55 P
ATOM 3 OP1 G B 690 35.264 54.411 44.558 1.00 75.67 O
ATOM 4 OP2 G B 690 32.843 54.980 45.251 1.00 73.42 O
ATOM 5 O5' G B 690 34.462 53.973 46.894 1.00 74.46 O
ATOM 6 C5' G B 690 34.773 52.583 46.776 1.00 74.08 C
ATOM 7 C4' G B 690 35.365 52.067 48.059 1.00 73.83 C
ATOM 8 O4' G B 690 36.712 52.574 48.247 1.00 73.77 O
ATOM 9 C3' G B 690 34.647 52.481 49.331 1.00 72.65 C
ATOM 10 O3' G B 690 33.464 51.732 49.546 1.00 72.33 O
ATOM 11 C2' G B 690 35.714 52.214 50.376 1.00 73.51 C
ATOM 12 O2' G B 690 35.831 50.852 50.719 1.00 74.10 O
ATOM 13 C1' G B 690 36.966 52.696 49.638 1.00 74.59 C
ATOM 14 N9 G B 690 37.166 54.100 49.970 1.00 76.25 N
ATOM 15 C8 G B 690 36.956 55.213 49.186 1.00 77.12 C
ATOM 16 N7 G B 690 37.157 56.332 49.831 1.00 77.11 N
ATOM 17 C5 G B 690 37.542 55.929 51.106 1.00 76.61 C
ATOM 18 C6 G B 690 37.886 56.690 52.250 1.00 76.05 C
ATOM 19 O6 G B 690 37.939 57.915 52.370 1.00 75.51 O
ATOM 20 N1 G B 690 38.190 55.874 53.336 1.00 75.26 N
ATOM 21 C2 G B 690 38.168 54.503 53.324 1.00 75.80 C
ATOM 22 N2 G B 690 38.450 53.890 54.476 1.00 75.38 N
ATOM 23 N3 G B 690 37.874 53.784 52.261 1.00 76.75 N
ATOM 24 C4 G B 690 37.566 54.557 51.198 1.00 76.64 C
ATOM 25 P G B 691 32.313 52.312 50.510 1.00 71.10 P
ATOM 26 OP1 G B 691 31.152 51.399 50.424 1.00 71.45 O
ATOM 27 OP2 G B 691 32.119 53.766 50.301 1.00 72.63 O
ATOM 28 O5' G B 691 32.918 52.076 51.949 1.00 70.82 O
TER
Atoms:
OP1: (40.564,68.902,48.339)
OP2: (41.711,67.321,50.016)
C3': (38.027,66.327,46.909)
C1': (37.895,63.999,47.253)
C5': (40.538,66.351,46.521)
O6: (38.399,61.269,52.532)
O4': (39.212,64.329,46.817)
C8: (37.961,64.469,49.750)
C2: (38.295,60.155,49.167)
C6: (38.318,61.346,51.309)
C5: (38.167,62.496,50.518)
C4: (38.097,62.356,49.150)
P: (41.422,67.703,48.618)
C4': (39.217,65.667,46.248)
C2': (36.998,65.208,46.971)
O2': (36.324,65.041,45.738)
N1: (38.377,60.194,50.534)
N2: (38.374,58.946,48.604)
N3: (38.150,61.225,48.412)
N7: (38.077,63.833,50.883)
N9: (37.974,63.630,48.660)
O5': (40.771,66.418,47.943)
O3': (37.600,67.372,46.085)
OP2: (41.711,67.321,50.016)
C3': (38.027,66.327,46.909)
C1': (37.895,63.999,47.253)
C5': (40.538,66.351,46.521)
O6: (38.399,61.269,52.532)
O4': (39.212,64.329,46.817)
C8: (37.961,64.469,49.750)
C2: (38.295,60.155,49.167)
C6: (38.318,61.346,51.309)
C5: (38.167,62.496,50.518)
C4: (38.097,62.356,49.150)
P: (41.422,67.703,48.618)
C4': (39.217,65.667,46.248)
C2': (36.998,65.208,46.971)
O2': (36.324,65.041,45.738)
N1: (38.377,60.194,50.534)
N2: (38.374,58.946,48.604)
N3: (38.150,61.225,48.412)
N7: (38.077,63.833,50.883)
N9: (37.974,63.630,48.660)
O5': (40.771,66.418,47.943)
O3': (37.600,67.372,46.085)
OP1: (35.264,54.411,44.558)
OP2: (32.843,54.980,45.251)
C3': (34.647,52.481,49.331)
C1': (36.966,52.696,49.638)
C5': (34.773,52.583,46.776)
O6: (37.939,57.915,52.370)
O4': (36.712,52.574,48.247)
C8: (36.956,55.213,49.186)
C2: (38.168,54.503,53.324)
C6: (37.886,56.690,52.250)
C5: (37.542,55.929,51.106)
C4: (37.566,54.557,51.198)
P: (34.294,54.868,45.591)
C4': (35.365,52.067,48.059)
C2': (35.714,52.214,50.376)
O2': (35.831,50.852,50.719)
N1: (38.190,55.874,53.336)
N2: (38.450,53.890,54.476)
N3: (37.874,53.784,52.261)
N7: (37.157,56.332,49.831)
N9: (37.166,54.100,49.970)
O5': (34.462,53.973,46.894)
O3': (33.464,51.732,49.546)
OP2: (32.843,54.980,45.251)
C3': (34.647,52.481,49.331)
C1': (36.966,52.696,49.638)
C5': (34.773,52.583,46.776)
O6: (37.939,57.915,52.370)
O4': (36.712,52.574,48.247)
C8: (36.956,55.213,49.186)
C2: (38.168,54.503,53.324)
C6: (37.886,56.690,52.250)
C5: (37.542,55.929,51.106)
C4: (37.566,54.557,51.198)
P: (34.294,54.868,45.591)
C4': (35.365,52.067,48.059)
C2': (35.714,52.214,50.376)
O2': (35.831,50.852,50.719)
N1: (38.190,55.874,53.336)
N2: (38.450,53.890,54.476)
N3: (37.874,53.784,52.261)
N7: (37.157,56.332,49.831)
N9: (37.166,54.100,49.970)
O5': (34.462,53.973,46.894)
O3': (33.464,51.732,49.546)
Image (generated by PyMOL):