Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MMS:C20:C40
Extra
PDB:
ATOM 1 O3' A A 19 1.078 2.564 -9.026 1.00 37.18 O
ATOM 2 P G A 20 2.022 1.866 -7.940 1.00 29.75 P
ATOM 3 OP1 G A 20 2.436 0.526 -8.435 1.00 39.01 O
ATOM 4 OP2 G A 20 1.299 1.985 -6.653 1.00 39.09 O
ATOM 5 O5' G A 20 3.325 2.769 -7.901 1.00 19.92 O
ATOM 6 C5' G A 20 3.295 4.113 -7.406 1.00 16.74 C
ATOM 7 C4' G A 20 4.704 4.562 -7.133 1.00 23.89 C
ATOM 8 O4' G A 20 5.222 3.769 -6.044 1.00 22.65 O
ATOM 9 C3' G A 20 5.633 4.285 -8.302 1.00 25.19 C
ATOM 10 O3' G A 20 5.646 5.390 -9.187 1.00 38.67 O
ATOM 11 C2' G A 20 6.974 4.006 -7.639 1.00 21.49 C
ATOM 12 O2' G A 20 7.729 5.164 -7.347 1.00 30.27 O
ATOM 13 C1' G A 20 6.533 3.335 -6.340 1.00 18.58 C
ATOM 14 N9 G A 20 6.500 1.878 -6.393 1.00 22.64 N
ATOM 15 C8 G A 20 5.389 1.076 -6.272 1.00 20.39 C
ATOM 16 N7 G A 20 5.672 -0.196 -6.315 1.00 31.29 N
ATOM 17 C5 G A 20 7.048 -0.236 -6.482 1.00 14.55 C
ATOM 18 C6 G A 20 7.922 -1.342 -6.582 1.00 28.22 C
ATOM 19 O6 G A 20 7.647 -2.549 -6.512 1.00 31.85 O
ATOM 20 N1 G A 20 9.239 -0.934 -6.762 1.00 15.53 N
ATOM 21 C2 G A 20 9.660 0.371 -6.818 1.00 20.27 C
ATOM 22 N2 G A 20 10.977 0.567 -6.997 1.00 25.10 N
ATOM 23 N3 G A 20 8.853 1.411 -6.707 1.00 19.36 N
ATOM 24 C4 G A 20 7.570 1.035 -6.546 1.00 11.18 C
ATOM 25 P C A 21 5.597 5.137 -10.767 1.00 27.21 P
ATOM 26 OP1 C A 21 5.512 6.459 -11.426 1.00 25.77 O
ATOM 27 OP2 C A 21 4.563 4.110 -11.043 1.00 30.50 O
ATOM 28 O5' C A 21 7.022 4.506 -11.073 1.00 15.96 O
TER
ATOM 1 O3' U B 39 17.267 3.222 -6.875 1.00 51.89 O
ATOM 2 P G B 40 16.725 3.245 -8.383 1.00 58.06 P
ATOM 3 OP1 G B 40 17.668 4.074 -9.177 1.00 62.85 O
ATOM 4 OP2 G B 40 15.277 3.599 -8.351 1.00 49.18 O
ATOM 5 O5' G B 40 16.838 1.724 -8.851 1.00 59.36 O
ATOM 6 C5' G B 40 18.123 1.141 -9.135 1.00 62.76 C
ATOM 7 C4' G B 40 18.029 -0.370 -9.212 1.00 62.76 C
ATOM 8 O4' G B 40 17.448 -0.882 -7.980 1.00 57.83 O
ATOM 9 C3' G B 40 17.168 -0.998 -10.302 1.00 67.15 C
ATOM 10 O3' G B 40 17.800 -1.073 -11.581 1.00 73.47 O
ATOM 11 C2' G B 40 16.911 -2.391 -9.736 1.00 63.68 C
ATOM 12 O2' G B 40 17.997 -3.276 -9.939 1.00 66.38 O
ATOM 13 C1' G B 40 16.766 -2.098 -8.243 1.00 52.76 C
ATOM 14 N9 G B 40 15.354 -1.954 -7.902 1.00 42.68 N
ATOM 15 C8 G B 40 14.638 -0.795 -7.717 1.00 43.79 C
ATOM 16 N7 G B 40 13.368 -1.009 -7.490 1.00 42.36 N
ATOM 17 C5 G B 40 13.243 -2.392 -7.512 1.00 31.07 C
ATOM 18 C6 G B 40 12.100 -3.220 -7.342 1.00 32.80 C
ATOM 19 O6 G B 40 10.926 -2.886 -7.133 1.00 29.29 O
ATOM 20 N1 G B 40 12.427 -4.567 -7.442 1.00 27.53 N
ATOM 21 C2 G B 40 13.687 -5.057 -7.676 1.00 37.58 C
ATOM 22 N2 G B 40 13.806 -6.387 -7.734 1.00 43.37 N
ATOM 23 N3 G B 40 14.754 -4.300 -7.840 1.00 37.83 N
ATOM 24 C4 G B 40 14.461 -2.989 -7.748 1.00 34.74 C
ATOM 25 P C B 41 16.901 -1.334 -12.902 1.00 78.16 P
ATOM 26 OP1 C B 41 17.813 -1.307 -14.079 1.00 77.44 O
ATOM 27 OP2 C B 41 15.717 -0.429 -12.869 1.00 76.90 O
ATOM 28 O5' C B 41 16.360 -2.822 -12.721 1.00 69.64 O
TER
ATOM 2 P G A 20 2.022 1.866 -7.940 1.00 29.75 P
ATOM 3 OP1 G A 20 2.436 0.526 -8.435 1.00 39.01 O
ATOM 4 OP2 G A 20 1.299 1.985 -6.653 1.00 39.09 O
ATOM 5 O5' G A 20 3.325 2.769 -7.901 1.00 19.92 O
ATOM 6 C5' G A 20 3.295 4.113 -7.406 1.00 16.74 C
ATOM 7 C4' G A 20 4.704 4.562 -7.133 1.00 23.89 C
ATOM 8 O4' G A 20 5.222 3.769 -6.044 1.00 22.65 O
ATOM 9 C3' G A 20 5.633 4.285 -8.302 1.00 25.19 C
ATOM 10 O3' G A 20 5.646 5.390 -9.187 1.00 38.67 O
ATOM 11 C2' G A 20 6.974 4.006 -7.639 1.00 21.49 C
ATOM 12 O2' G A 20 7.729 5.164 -7.347 1.00 30.27 O
ATOM 13 C1' G A 20 6.533 3.335 -6.340 1.00 18.58 C
ATOM 14 N9 G A 20 6.500 1.878 -6.393 1.00 22.64 N
ATOM 15 C8 G A 20 5.389 1.076 -6.272 1.00 20.39 C
ATOM 16 N7 G A 20 5.672 -0.196 -6.315 1.00 31.29 N
ATOM 17 C5 G A 20 7.048 -0.236 -6.482 1.00 14.55 C
ATOM 18 C6 G A 20 7.922 -1.342 -6.582 1.00 28.22 C
ATOM 19 O6 G A 20 7.647 -2.549 -6.512 1.00 31.85 O
ATOM 20 N1 G A 20 9.239 -0.934 -6.762 1.00 15.53 N
ATOM 21 C2 G A 20 9.660 0.371 -6.818 1.00 20.27 C
ATOM 22 N2 G A 20 10.977 0.567 -6.997 1.00 25.10 N
ATOM 23 N3 G A 20 8.853 1.411 -6.707 1.00 19.36 N
ATOM 24 C4 G A 20 7.570 1.035 -6.546 1.00 11.18 C
ATOM 25 P C A 21 5.597 5.137 -10.767 1.00 27.21 P
ATOM 26 OP1 C A 21 5.512 6.459 -11.426 1.00 25.77 O
ATOM 27 OP2 C A 21 4.563 4.110 -11.043 1.00 30.50 O
ATOM 28 O5' C A 21 7.022 4.506 -11.073 1.00 15.96 O
TER
ATOM 1 O3' U B 39 17.267 3.222 -6.875 1.00 51.89 O
ATOM 2 P G B 40 16.725 3.245 -8.383 1.00 58.06 P
ATOM 3 OP1 G B 40 17.668 4.074 -9.177 1.00 62.85 O
ATOM 4 OP2 G B 40 15.277 3.599 -8.351 1.00 49.18 O
ATOM 5 O5' G B 40 16.838 1.724 -8.851 1.00 59.36 O
ATOM 6 C5' G B 40 18.123 1.141 -9.135 1.00 62.76 C
ATOM 7 C4' G B 40 18.029 -0.370 -9.212 1.00 62.76 C
ATOM 8 O4' G B 40 17.448 -0.882 -7.980 1.00 57.83 O
ATOM 9 C3' G B 40 17.168 -0.998 -10.302 1.00 67.15 C
ATOM 10 O3' G B 40 17.800 -1.073 -11.581 1.00 73.47 O
ATOM 11 C2' G B 40 16.911 -2.391 -9.736 1.00 63.68 C
ATOM 12 O2' G B 40 17.997 -3.276 -9.939 1.00 66.38 O
ATOM 13 C1' G B 40 16.766 -2.098 -8.243 1.00 52.76 C
ATOM 14 N9 G B 40 15.354 -1.954 -7.902 1.00 42.68 N
ATOM 15 C8 G B 40 14.638 -0.795 -7.717 1.00 43.79 C
ATOM 16 N7 G B 40 13.368 -1.009 -7.490 1.00 42.36 N
ATOM 17 C5 G B 40 13.243 -2.392 -7.512 1.00 31.07 C
ATOM 18 C6 G B 40 12.100 -3.220 -7.342 1.00 32.80 C
ATOM 19 O6 G B 40 10.926 -2.886 -7.133 1.00 29.29 O
ATOM 20 N1 G B 40 12.427 -4.567 -7.442 1.00 27.53 N
ATOM 21 C2 G B 40 13.687 -5.057 -7.676 1.00 37.58 C
ATOM 22 N2 G B 40 13.806 -6.387 -7.734 1.00 43.37 N
ATOM 23 N3 G B 40 14.754 -4.300 -7.840 1.00 37.83 N
ATOM 24 C4 G B 40 14.461 -2.989 -7.748 1.00 34.74 C
ATOM 25 P C B 41 16.901 -1.334 -12.902 1.00 78.16 P
ATOM 26 OP1 C B 41 17.813 -1.307 -14.079 1.00 77.44 O
ATOM 27 OP2 C B 41 15.717 -0.429 -12.869 1.00 76.90 O
ATOM 28 O5' C B 41 16.360 -2.822 -12.721 1.00 69.64 O
TER
Atoms:
OP1: (2.436,0.526,-8.435)
OP2: (1.299,1.985,-6.653)
C3': (5.633,4.285,-8.302)
C1': (6.533,3.335,-6.340)
C5': (3.295,4.113,-7.406)
O6: (7.647,-2.549,-6.512)
O4': (5.222,3.769,-6.044)
C8: (5.389,1.076,-6.272)
C2: (9.660,0.371,-6.818)
C6: (7.922,-1.342,-6.582)
C5: (7.048,-0.236,-6.482)
C4: (7.570,1.035,-6.546)
P: (2.022,1.866,-7.940)
C4': (4.704,4.562,-7.133)
C2': (6.974,4.006,-7.639)
O2': (7.729,5.164,-7.347)
N1: (9.239,-0.934,-6.762)
N2: (10.977,0.567,-6.997)
N3: (8.853,1.411,-6.707)
N7: (5.672,-0.196,-6.315)
N9: (6.500,1.878,-6.393)
O5': (3.325,2.769,-7.901)
O3': (5.646,5.390,-9.187)
OP2: (1.299,1.985,-6.653)
C3': (5.633,4.285,-8.302)
C1': (6.533,3.335,-6.340)
C5': (3.295,4.113,-7.406)
O6: (7.647,-2.549,-6.512)
O4': (5.222,3.769,-6.044)
C8: (5.389,1.076,-6.272)
C2: (9.660,0.371,-6.818)
C6: (7.922,-1.342,-6.582)
C5: (7.048,-0.236,-6.482)
C4: (7.570,1.035,-6.546)
P: (2.022,1.866,-7.940)
C4': (4.704,4.562,-7.133)
C2': (6.974,4.006,-7.639)
O2': (7.729,5.164,-7.347)
N1: (9.239,-0.934,-6.762)
N2: (10.977,0.567,-6.997)
N3: (8.853,1.411,-6.707)
N7: (5.672,-0.196,-6.315)
N9: (6.500,1.878,-6.393)
O5': (3.325,2.769,-7.901)
O3': (5.646,5.390,-9.187)
OP1: (17.668,4.074,-9.177)
OP2: (15.277,3.599,-8.351)
C3': (17.168,-0.998,-10.302)
C1': (16.766,-2.098,-8.243)
C5': (18.123,1.141,-9.135)
O6: (10.926,-2.886,-7.133)
O4': (17.448,-0.882,-7.980)
C8: (14.638,-0.795,-7.717)
C2: (13.687,-5.057,-7.676)
C6: (12.100,-3.220,-7.342)
C5: (13.243,-2.392,-7.512)
C4: (14.461,-2.989,-7.748)
P: (16.725,3.245,-8.383)
C4': (18.029,-0.370,-9.212)
C2': (16.911,-2.391,-9.736)
O2': (17.997,-3.276,-9.939)
N1: (12.427,-4.567,-7.442)
N2: (13.806,-6.387,-7.734)
N3: (14.754,-4.300,-7.840)
N7: (13.368,-1.009,-7.490)
N9: (15.354,-1.954,-7.902)
O5': (16.838,1.724,-8.851)
O3': (17.800,-1.073,-11.581)
OP2: (15.277,3.599,-8.351)
C3': (17.168,-0.998,-10.302)
C1': (16.766,-2.098,-8.243)
C5': (18.123,1.141,-9.135)
O6: (10.926,-2.886,-7.133)
O4': (17.448,-0.882,-7.980)
C8: (14.638,-0.795,-7.717)
C2: (13.687,-5.057,-7.676)
C6: (12.100,-3.220,-7.342)
C5: (13.243,-2.392,-7.512)
C4: (14.461,-2.989,-7.748)
P: (16.725,3.245,-8.383)
C4': (18.029,-0.370,-9.212)
C2': (16.911,-2.391,-9.736)
O2': (17.997,-3.276,-9.939)
N1: (12.427,-4.567,-7.442)
N2: (13.806,-6.387,-7.734)
N3: (14.754,-4.300,-7.840)
N7: (13.368,-1.009,-7.490)
N9: (15.354,-1.954,-7.902)
O5': (16.838,1.724,-8.851)
O3': (17.800,-1.073,-11.581)
Image (generated by PyMOL):