Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GCS:B120:B121
Extra
PDB:
ATOM 1 O3' G A 119 4.069 -6.456 -14.751 1.00 57.35 O
ATOM 2 P G A 120 2.581 -6.633 -14.168 1.00 59.34 P
ATOM 3 OP1 G A 120 1.864 -7.515 -15.123 1.00 59.39 O
ATOM 4 OP2 G A 120 2.025 -5.290 -13.849 1.00 57.78 O
ATOM 5 O5' G A 120 2.782 -7.439 -12.806 1.00 56.95 O
ATOM 6 C5' G A 120 3.206 -8.797 -12.829 1.00 56.17 C
ATOM 7 C4' G A 120 3.404 -9.327 -11.424 1.00 55.49 C
ATOM 8 O4' G A 120 4.427 -8.551 -10.749 1.00 54.25 O
ATOM 9 C3' G A 120 2.236 -9.253 -10.453 1.00 56.06 C
ATOM 10 O3' G A 120 1.295 -10.298 -10.640 1.00 58.96 O
ATOM 11 C2' G A 120 2.947 -9.434 -9.122 1.00 54.55 C
ATOM 12 O2' G A 120 3.289 -10.781 -8.865 1.00 53.63 O
ATOM 13 C1' G A 120 4.209 -8.602 -9.348 1.00 52.51 C
ATOM 14 N9 G A 120 4.018 -7.243 -8.857 1.00 50.21 N
ATOM 15 C8 G A 120 3.797 -6.105 -9.597 1.00 48.45 C
ATOM 16 N7 G A 120 3.626 -5.041 -8.858 1.00 45.81 N
ATOM 17 C5 G A 120 3.750 -5.506 -7.556 1.00 44.89 C
ATOM 18 C6 G A 120 3.658 -4.815 -6.321 1.00 42.61 C
ATOM 19 O6 G A 120 3.441 -3.614 -6.126 1.00 42.04 O
ATOM 20 N1 G A 120 3.846 -5.671 -5.240 1.00 41.22 N
ATOM 21 C2 G A 120 4.094 -7.020 -5.334 1.00 44.37 C
ATOM 22 N2 G A 120 4.250 -7.680 -4.177 1.00 44.93 N
ATOM 23 N3 G A 120 4.182 -7.676 -6.481 1.00 46.44 N
ATOM 24 C4 G A 120 3.999 -6.861 -7.541 1.00 45.72 C
ATOM 25 P A A 121 -0.213 -10.113 -10.107 1.00 60.22 P
ATOM 26 OP1 A A 121 -1.010 -11.240 -10.657 1.00 61.14 O
ATOM 27 OP2 A A 121 -0.638 -8.713 -10.373 1.00 59.86 O
ATOM 28 O5' A A 121 -0.122 -10.287 -8.525 1.00 58.81 O
TER
ATOM 1 O3' G B 120 1.295 -10.298 -10.640 1.00 58.96 O
ATOM 2 P A B 121 -0.213 -10.113 -10.107 1.00 60.22 P
ATOM 3 OP1 A B 121 -1.010 -11.240 -10.657 1.00 61.14 O
ATOM 4 OP2 A B 121 -0.638 -8.713 -10.373 1.00 59.86 O
ATOM 5 O5' A B 121 -0.122 -10.287 -8.525 1.00 58.81 O
ATOM 6 C5' A B 121 0.372 -11.488 -7.946 1.00 60.12 C
ATOM 7 C4' A B 121 0.580 -11.305 -6.463 1.00 61.36 C
ATOM 8 O4' A B 121 1.553 -10.246 -6.268 1.00 61.05 O
ATOM 9 C3' A B 121 -0.620 -10.848 -5.639 1.00 63.01 C
ATOM 10 O3' A B 121 -1.467 -11.930 -5.249 1.00 66.36 O
ATOM 11 C2' A B 121 0.066 -10.246 -4.420 1.00 61.38 C
ATOM 12 O2' A B 121 0.565 -11.245 -3.551 1.00 61.48 O
ATOM 13 C1' A B 121 1.261 -9.555 -5.067 1.00 59.54 C
ATOM 14 N9 A B 121 1.010 -8.153 -5.384 1.00 56.84 N
ATOM 15 C8 A B 121 0.834 -7.562 -6.612 1.00 55.58 C
ATOM 16 N7 A B 121 0.676 -6.261 -6.552 1.00 54.32 N
ATOM 17 C5 A B 121 0.740 -5.983 -5.195 1.00 52.94 C
ATOM 18 C6 A B 121 0.654 -4.790 -4.476 1.00 51.61 C
ATOM 19 N6 A B 121 0.480 -3.599 -5.049 1.00 48.91 N
ATOM 20 N1 A B 121 0.755 -4.856 -3.130 1.00 50.53 N
ATOM 21 C2 A B 121 0.935 -6.051 -2.561 1.00 50.95 C
ATOM 22 N3 A B 121 1.037 -7.245 -3.130 1.00 53.28 N
ATOM 23 C4 A B 121 0.932 -7.139 -4.465 1.00 54.86 C
TER
ATOM 2 P G A 120 2.581 -6.633 -14.168 1.00 59.34 P
ATOM 3 OP1 G A 120 1.864 -7.515 -15.123 1.00 59.39 O
ATOM 4 OP2 G A 120 2.025 -5.290 -13.849 1.00 57.78 O
ATOM 5 O5' G A 120 2.782 -7.439 -12.806 1.00 56.95 O
ATOM 6 C5' G A 120 3.206 -8.797 -12.829 1.00 56.17 C
ATOM 7 C4' G A 120 3.404 -9.327 -11.424 1.00 55.49 C
ATOM 8 O4' G A 120 4.427 -8.551 -10.749 1.00 54.25 O
ATOM 9 C3' G A 120 2.236 -9.253 -10.453 1.00 56.06 C
ATOM 10 O3' G A 120 1.295 -10.298 -10.640 1.00 58.96 O
ATOM 11 C2' G A 120 2.947 -9.434 -9.122 1.00 54.55 C
ATOM 12 O2' G A 120 3.289 -10.781 -8.865 1.00 53.63 O
ATOM 13 C1' G A 120 4.209 -8.602 -9.348 1.00 52.51 C
ATOM 14 N9 G A 120 4.018 -7.243 -8.857 1.00 50.21 N
ATOM 15 C8 G A 120 3.797 -6.105 -9.597 1.00 48.45 C
ATOM 16 N7 G A 120 3.626 -5.041 -8.858 1.00 45.81 N
ATOM 17 C5 G A 120 3.750 -5.506 -7.556 1.00 44.89 C
ATOM 18 C6 G A 120 3.658 -4.815 -6.321 1.00 42.61 C
ATOM 19 O6 G A 120 3.441 -3.614 -6.126 1.00 42.04 O
ATOM 20 N1 G A 120 3.846 -5.671 -5.240 1.00 41.22 N
ATOM 21 C2 G A 120 4.094 -7.020 -5.334 1.00 44.37 C
ATOM 22 N2 G A 120 4.250 -7.680 -4.177 1.00 44.93 N
ATOM 23 N3 G A 120 4.182 -7.676 -6.481 1.00 46.44 N
ATOM 24 C4 G A 120 3.999 -6.861 -7.541 1.00 45.72 C
ATOM 25 P A A 121 -0.213 -10.113 -10.107 1.00 60.22 P
ATOM 26 OP1 A A 121 -1.010 -11.240 -10.657 1.00 61.14 O
ATOM 27 OP2 A A 121 -0.638 -8.713 -10.373 1.00 59.86 O
ATOM 28 O5' A A 121 -0.122 -10.287 -8.525 1.00 58.81 O
TER
ATOM 1 O3' G B 120 1.295 -10.298 -10.640 1.00 58.96 O
ATOM 2 P A B 121 -0.213 -10.113 -10.107 1.00 60.22 P
ATOM 3 OP1 A B 121 -1.010 -11.240 -10.657 1.00 61.14 O
ATOM 4 OP2 A B 121 -0.638 -8.713 -10.373 1.00 59.86 O
ATOM 5 O5' A B 121 -0.122 -10.287 -8.525 1.00 58.81 O
ATOM 6 C5' A B 121 0.372 -11.488 -7.946 1.00 60.12 C
ATOM 7 C4' A B 121 0.580 -11.305 -6.463 1.00 61.36 C
ATOM 8 O4' A B 121 1.553 -10.246 -6.268 1.00 61.05 O
ATOM 9 C3' A B 121 -0.620 -10.848 -5.639 1.00 63.01 C
ATOM 10 O3' A B 121 -1.467 -11.930 -5.249 1.00 66.36 O
ATOM 11 C2' A B 121 0.066 -10.246 -4.420 1.00 61.38 C
ATOM 12 O2' A B 121 0.565 -11.245 -3.551 1.00 61.48 O
ATOM 13 C1' A B 121 1.261 -9.555 -5.067 1.00 59.54 C
ATOM 14 N9 A B 121 1.010 -8.153 -5.384 1.00 56.84 N
ATOM 15 C8 A B 121 0.834 -7.562 -6.612 1.00 55.58 C
ATOM 16 N7 A B 121 0.676 -6.261 -6.552 1.00 54.32 N
ATOM 17 C5 A B 121 0.740 -5.983 -5.195 1.00 52.94 C
ATOM 18 C6 A B 121 0.654 -4.790 -4.476 1.00 51.61 C
ATOM 19 N6 A B 121 0.480 -3.599 -5.049 1.00 48.91 N
ATOM 20 N1 A B 121 0.755 -4.856 -3.130 1.00 50.53 N
ATOM 21 C2 A B 121 0.935 -6.051 -2.561 1.00 50.95 C
ATOM 22 N3 A B 121 1.037 -7.245 -3.130 1.00 53.28 N
ATOM 23 C4 A B 121 0.932 -7.139 -4.465 1.00 54.86 C
TER
Atoms:
OP1: (1.864,-7.515,-15.123)
OP2: (2.025,-5.290,-13.849)
C3': (2.236,-9.253,-10.453)
C1': (4.209,-8.602,-9.348)
C5': (3.206,-8.797,-12.829)
O6: (3.441,-3.614,-6.126)
O4': (4.427,-8.551,-10.749)
C8: (3.797,-6.105,-9.597)
C2: (4.094,-7.020,-5.334)
C6: (3.658,-4.815,-6.321)
C5: (3.750,-5.506,-7.556)
C4: (3.999,-6.861,-7.541)
P: (2.581,-6.633,-14.168)
C4': (3.404,-9.327,-11.424)
C2': (2.947,-9.434,-9.122)
O2': (3.289,-10.781,-8.865)
N1: (3.846,-5.671,-5.240)
N2: (4.250,-7.680,-4.177)
N3: (4.182,-7.676,-6.481)
N7: (3.626,-5.041,-8.858)
N9: (4.018,-7.243,-8.857)
O5': (2.782,-7.439,-12.806)
O3': (1.295,-10.298,-10.640)
OP2: (2.025,-5.290,-13.849)
C3': (2.236,-9.253,-10.453)
C1': (4.209,-8.602,-9.348)
C5': (3.206,-8.797,-12.829)
O6: (3.441,-3.614,-6.126)
O4': (4.427,-8.551,-10.749)
C8: (3.797,-6.105,-9.597)
C2: (4.094,-7.020,-5.334)
C6: (3.658,-4.815,-6.321)
C5: (3.750,-5.506,-7.556)
C4: (3.999,-6.861,-7.541)
P: (2.581,-6.633,-14.168)
C4': (3.404,-9.327,-11.424)
C2': (2.947,-9.434,-9.122)
O2': (3.289,-10.781,-8.865)
N1: (3.846,-5.671,-5.240)
N2: (4.250,-7.680,-4.177)
N3: (4.182,-7.676,-6.481)
N7: (3.626,-5.041,-8.858)
N9: (4.018,-7.243,-8.857)
O5': (2.782,-7.439,-12.806)
O3': (1.295,-10.298,-10.640)
OP1: (-1.010,-11.240,-10.657)
OP2: (-0.638,-8.713,-10.373)
C3': (-0.620,-10.848,-5.639)
C1': (1.261,-9.555,-5.067)
C5': (0.372,-11.488,-7.946)
O4': (1.553,-10.246,-6.268)
C8: (0.834,-7.562,-6.612)
O2': (0.565,-11.245,-3.551)
C6: (0.654,-4.790,-4.476)
C5: (0.740,-5.983,-5.195)
C4: (0.932,-7.139,-4.465)
P: (-0.213,-10.113,-10.107)
C4': (0.580,-11.305,-6.463)
C2': (0.066,-10.246,-4.420)
C2: (0.935,-6.051,-2.561)
N1: (0.755,-4.856,-3.130)
N3: (1.037,-7.245,-3.130)
N6: (0.480,-3.599,-5.049)
N7: (0.676,-6.261,-6.552)
N9: (1.010,-8.153,-5.384)
O5': (-0.122,-10.287,-8.525)
O3': (-1.467,-11.930,-5.249)
OP2: (-0.638,-8.713,-10.373)
C3': (-0.620,-10.848,-5.639)
C1': (1.261,-9.555,-5.067)
C5': (0.372,-11.488,-7.946)
O4': (1.553,-10.246,-6.268)
C8: (0.834,-7.562,-6.612)
O2': (0.565,-11.245,-3.551)
C6: (0.654,-4.790,-4.476)
C5: (0.740,-5.983,-5.195)
C4: (0.932,-7.139,-4.465)
P: (-0.213,-10.113,-10.107)
C4': (0.580,-11.305,-6.463)
C2': (0.066,-10.246,-4.420)
C2: (0.935,-6.051,-2.561)
N1: (0.755,-4.856,-3.130)
N3: (1.037,-7.245,-3.130)
N6: (0.480,-3.599,-5.049)
N7: (0.676,-6.261,-6.552)
N9: (1.010,-8.153,-5.384)
O5': (-0.122,-10.287,-8.525)
O3': (-1.467,-11.930,-5.249)
Image (generated by PyMOL):