ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A592:A595

Extra

PDB:
ATOM 1 O3' A A 591 -5.826 134.306 88.441 1.00 81.54 O
ATOM 2 P G A 592 -5.100 135.157 89.615 1.00 83.61 P
ATOM 3 OP1 G A 592 -5.947 135.111 90.837 1.00 84.32 O
ATOM 4 OP2 G A 592 -4.718 136.478 89.039 1.00 83.56 O
ATOM 5 O5' G A 592 -3.744 134.362 89.905 1.00 80.66 O
ATOM 6 C5' G A 592 -2.757 134.876 90.840 1.00 73.67 C
ATOM 7 C4' G A 592 -1.940 133.740 91.444 1.00 69.86 C
ATOM 8 O4' G A 592 -1.174 133.055 90.411 1.00 68.51 O
ATOM 9 C3' G A 592 -0.915 134.174 92.496 1.00 68.19 C
ATOM 10 O3' G A 592 -0.676 133.160 93.470 1.00 67.39 O
ATOM 11 C2' G A 592 0.372 134.262 91.692 1.00 67.31 C
ATOM 12 O2' G A 592 1.505 134.108 92.524 1.00 66.73 O
ATOM 13 C1' G A 592 0.203 133.063 90.756 1.00 66.46 C
ATOM 14 N9 G A 592 1.002 133.087 89.528 1.00 64.03 N
ATOM 15 C8 G A 592 1.338 134.189 88.775 1.00 62.84 C
ATOM 16 N7 G A 592 2.049 133.893 87.721 1.00 62.43 N
ATOM 17 C5 G A 592 2.199 132.514 87.779 1.00 62.33 C
ATOM 18 C6 G A 592 2.877 131.624 86.897 1.00 62.12 C
ATOM 19 O6 G A 592 3.517 131.891 85.869 1.00 62.35 O
ATOM 20 N1 G A 592 2.761 130.307 87.315 1.00 60.57 N
ATOM 21 C2 G A 592 2.095 129.894 88.439 1.00 61.25 C
ATOM 22 N2 G A 592 2.080 128.572 88.652 1.00 61.12 N
ATOM 23 N3 G A 592 1.481 130.711 89.286 1.00 61.40 N
ATOM 24 C4 G A 592 1.565 131.999 88.891 1.00 62.35 C
ATOM 25 P C A 593 -1.897 132.524 94.290 1.00 66.11 P
ATOM 26 OP1 C A 593 -2.986 133.541 94.308 1.00 65.51 O
ATOM 27 OP2 C A 593 -1.376 131.988 95.582 1.00 64.08 O
ATOM 28 O5' C A 593 -2.330 131.310 93.345 1.00 63.22 O
TER

ATOM 1 O3' C B 594 1.605 122.607 91.497 1.00 42.68 O
ATOM 2 P G B 595 3.164 123.013 91.420 1.00 43.10 P
ATOM 3 OP1 G B 595 3.931 122.119 92.340 1.00 44.08 O
ATOM 4 OP2 G B 595 3.276 124.491 91.569 1.00 40.87 O
ATOM 5 O5' G B 595 3.584 122.629 89.934 1.00 40.56 O
ATOM 6 C5' G B 595 3.467 121.278 89.463 1.00 38.77 C
ATOM 7 C4' G B 595 3.681 121.231 87.969 1.00 38.83 C
ATOM 8 O4' G B 595 2.701 122.076 87.318 1.00 38.23 O
ATOM 9 C3' G B 595 5.002 121.792 87.478 1.00 38.90 C
ATOM 10 O3' G B 595 6.046 120.836 87.564 1.00 40.26 O
ATOM 11 C2' G B 595 4.690 122.125 86.030 1.00 37.72 C
ATOM 12 O2' G B 595 4.699 120.987 85.195 1.00 38.82 O
ATOM 13 C1' G B 595 3.266 122.648 86.154 1.00 36.44 C
ATOM 14 N9 G B 595 3.259 124.097 86.286 1.00 36.02 N
ATOM 15 C8 G B 595 2.917 124.845 87.383 1.00 35.95 C
ATOM 16 N7 G B 595 2.990 126.129 87.169 1.00 35.61 N
ATOM 17 C5 G B 595 3.412 126.231 85.851 1.00 36.54 C
ATOM 18 C6 G B 595 3.650 127.371 85.046 1.00 37.10 C
ATOM 19 O6 G B 595 3.513 128.570 85.336 1.00 39.59 O
ATOM 20 N1 G B 595 4.076 127.013 83.773 1.00 37.07 N
ATOM 21 C2 G B 595 4.237 125.729 83.325 1.00 36.15 C
ATOM 22 N2 G B 595 4.655 125.589 82.063 1.00 36.48 N
ATOM 23 N3 G B 595 4.004 124.660 84.060 1.00 36.11 N
ATOM 24 C4 G B 595 3.595 124.983 85.301 1.00 36.17 C
ATOM 25 P A B 596 7.522 121.312 87.961 1.00 41.68 P
ATOM 26 OP1 A B 596 8.419 120.168 87.663 1.00 40.06 O
ATOM 27 OP2 A B 596 7.498 121.914 89.318 1.00 41.45 O
ATOM 28 O5' A B 596 7.846 122.463 86.922 1.00 39.43 O
TER

Atoms:
OP1: (-5.947,135.111,90.837)
OP2: (-4.718,136.478,89.039)
C3': (-0.915,134.174,92.496)
C1': (0.203,133.063,90.756)
C5': (-2.757,134.876,90.840)
O6: (3.517,131.891,85.869)
O4': (-1.174,133.055,90.411)
C8: (1.338,134.189,88.775)
C2: (2.095,129.894,88.439)
C6: (2.877,131.624,86.897)
C5: (2.199,132.514,87.779)
C4: (1.565,131.999,88.891)
P: (-5.100,135.157,89.615)
C4': (-1.940,133.740,91.444)
C2': (0.372,134.262,91.692)
O2': (1.505,134.108,92.524)
N1: (2.761,130.307,87.315)
N2: (2.080,128.572,88.652)
N3: (1.481,130.711,89.286)
N7: (2.049,133.893,87.721)
N9: (1.002,133.087,89.528)
O5': (-3.744,134.362,89.905)
O3': (-0.676,133.160,93.470)
OP1: (3.931,122.119,92.340)
OP2: (3.276,124.491,91.569)
C3': (5.002,121.792,87.478)
C1': (3.266,122.648,86.154)
C5': (3.467,121.278,89.463)
O6: (3.513,128.570,85.336)
O4': (2.701,122.076,87.318)
C8: (2.917,124.845,87.383)
C2: (4.237,125.729,83.325)
C6: (3.650,127.371,85.046)
C5: (3.412,126.231,85.851)
C4: (3.595,124.983,85.301)
P: (3.164,123.013,91.420)
C4': (3.681,121.231,87.969)
C2': (4.690,122.125,86.030)
O2': (4.699,120.987,85.195)
N1: (4.076,127.013,83.773)
N2: (4.655,125.589,82.063)
N3: (4.004,124.660,84.060)
N7: (2.990,126.129,87.169)
N9: (3.259,124.097,86.286)
O5': (3.584,122.629,89.934)
O3': (6.046,120.836,87.564)
Image (generated by PyMOL):
PyMOL image
show in jmol