ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U9S:A108:A97

Extra

PDB:
ATOM 1 O3' A A 107 52.280 -4.329 124.864 1.00 36.84 O
ATOM 2 P G A 108 52.602 -3.060 123.931 1.00 43.53 P
ATOM 3 OP1 G A 108 51.522 -2.951 122.910 1.00 23.69 O
ATOM 4 OP2 G A 108 54.028 -3.114 123.483 1.00 39.85 O
ATOM 5 O5' G A 108 52.468 -1.842 124.932 1.00 40.53 O
ATOM 6 C5' G A 108 51.199 -1.505 125.435 1.00 37.78 C
ATOM 7 C4' G A 108 51.306 -1.114 126.874 1.00 39.56 C
ATOM 8 O4' G A 108 51.772 0.246 126.989 1.00 48.19 O
ATOM 9 C3' G A 108 49.990 -1.135 127.567 1.00 40.42 C
ATOM 10 O3' G A 108 49.880 -2.182 128.538 1.00 40.01 O
ATOM 11 C2' G A 108 49.448 0.301 127.548 1.00 42.54 C
ATOM 12 O2' G A 108 48.789 0.680 128.746 1.00 47.18 O
ATOM 13 C1' G A 108 50.734 1.114 127.358 1.00 43.20 C
ATOM 14 N9 G A 108 50.838 2.237 126.427 1.00 52.80 N
ATOM 15 C8 G A 108 51.346 3.477 126.737 1.00 53.64 C
ATOM 16 N7 G A 108 51.508 4.245 125.692 1.00 53.30 N
ATOM 17 C5 G A 108 51.043 3.487 124.630 1.00 52.40 C
ATOM 18 C6 G A 108 50.989 3.798 123.259 1.00 52.39 C
ATOM 19 O6 G A 108 51.353 4.827 122.686 1.00 53.82 O
ATOM 20 N1 G A 108 50.449 2.767 122.524 1.00 54.37 N
ATOM 21 C2 G A 108 50.013 1.584 123.038 1.00 56.16 C
ATOM 22 N2 G A 108 49.498 0.723 122.133 1.00 61.27 N
ATOM 23 N3 G A 108 50.066 1.264 124.328 1.00 52.89 N
ATOM 24 C4 G A 108 50.589 2.259 125.063 1.00 53.17 C
ATOM 25 P C A 109 50.199 -1.908 130.087 1.00 50.89 P
ATOM 26 OP1 C A 109 49.977 -3.180 130.805 1.00 54.24 O
ATOM 27 OP2 C A 109 49.447 -0.678 130.543 1.00 60.83 O
ATOM 28 O5' C A 109 51.763 -1.626 130.188 1.00 41.84 O
TER

ATOM 1 O3' G B 96 46.019 -3.737 119.225 1.00 43.18 O
ATOM 2 P G B 97 47.554 -3.660 118.742 1.00 51.56 P
ATOM 3 OP1 G B 97 47.898 -4.909 118.013 1.00 48.11 O
ATOM 4 OP2 G B 97 48.379 -3.240 119.912 1.00 46.94 O
ATOM 5 O5' G B 97 47.544 -2.509 117.646 1.00 51.66 O
ATOM 6 C5' G B 97 46.742 -2.657 116.492 1.00 52.81 C
ATOM 7 C4' G B 97 46.932 -1.491 115.559 1.00 49.09 C
ATOM 8 O4' G B 97 46.427 -0.284 116.189 1.00 47.71 O
ATOM 9 C3' G B 97 48.373 -1.154 115.248 1.00 47.98 C
ATOM 10 O3' G B 97 48.885 -1.943 114.189 1.00 48.14 O
ATOM 11 C2' G B 97 48.263 0.297 114.826 1.00 47.42 C
ATOM 12 O2' G B 97 47.735 0.371 113.520 1.00 54.83 O
ATOM 13 C1' G B 97 47.214 0.815 115.798 1.00 45.93 C
ATOM 14 N9 G B 97 47.810 1.407 116.981 1.00 42.71 N
ATOM 15 C8 G B 97 47.817 0.902 118.248 1.00 44.88 C
ATOM 16 N7 G B 97 48.439 1.670 119.102 1.00 44.22 N
ATOM 17 C5 G B 97 48.863 2.741 118.346 1.00 46.71 C
ATOM 18 C6 G B 97 49.578 3.879 118.724 1.00 53.65 C
ATOM 19 O6 G B 97 50.013 4.169 119.850 1.00 61.45 O
ATOM 20 N1 G B 97 49.785 4.739 117.651 1.00 55.50 N
ATOM 21 C2 G B 97 49.351 4.516 116.375 1.00 59.90 C
ATOM 22 N2 G B 97 49.634 5.462 115.474 1.00 63.85 N
ATOM 23 N3 G B 97 48.683 3.439 116.005 1.00 56.51 N
ATOM 24 C4 G B 97 48.478 2.597 117.037 1.00 48.36 C
ATOM 25 P C B 98 50.468 -2.221 114.116 1.00 54.27 P
ATOM 26 OP1 C B 98 50.752 -3.078 112.931 1.00 44.40 O
ATOM 27 OP2 C B 98 50.886 -2.645 115.473 1.00 44.67 O
ATOM 28 O5' C B 98 51.124 -0.795 113.872 1.00 52.63 O
TER

Atoms:
OP1: (51.522,-2.951,122.910)
OP2: (54.028,-3.114,123.483)
C3': (49.990,-1.135,127.567)
C1': (50.734,1.114,127.358)
C5': (51.199,-1.505,125.435)
O6: (51.353,4.827,122.686)
O4': (51.772,0.246,126.989)
C8: (51.346,3.477,126.737)
C2: (50.013,1.584,123.038)
C6: (50.989,3.798,123.259)
C5: (51.043,3.487,124.630)
C4: (50.589,2.259,125.063)
P: (52.602,-3.060,123.931)
C4': (51.306,-1.114,126.874)
C2': (49.448,0.301,127.548)
O2': (48.789,0.680,128.746)
N1: (50.449,2.767,122.524)
N2: (49.498,0.723,122.133)
N3: (50.066,1.264,124.328)
N7: (51.508,4.245,125.692)
N9: (50.838,2.237,126.427)
O5': (52.468,-1.842,124.932)
O3': (49.880,-2.182,128.538)
OP1: (47.898,-4.909,118.013)
OP2: (48.379,-3.240,119.912)
C3': (48.373,-1.154,115.248)
C1': (47.214,0.815,115.798)
C5': (46.742,-2.657,116.492)
O6: (50.013,4.169,119.850)
O4': (46.427,-0.284,116.189)
C8: (47.817,0.902,118.248)
C2: (49.351,4.516,116.375)
C6: (49.578,3.879,118.724)
C5: (48.863,2.741,118.346)
C4: (48.478,2.597,117.037)
P: (47.554,-3.660,118.742)
C4': (46.932,-1.491,115.559)
C2': (48.263,0.297,114.826)
O2': (47.735,0.371,113.520)
N1: (49.785,4.739,117.651)
N2: (49.634,5.462,115.474)
N3: (48.683,3.439,116.005)
N7: (48.439,1.670,119.102)
N9: (47.810,1.407,116.981)
O5': (47.544,-2.509,117.646)
O3': (48.885,-1.943,114.189)
Image (generated by PyMOL):
PyMOL image
show in jmol