ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHK:A225:A399

Extra

PDB:
ATOM 1 O3' U A 224 166.583 -39.226-142.746 1.00 37.23 O
ATOM 2 P A A 225 165.984 -39.814-144.119 1.00 64.71 P
ATOM 3 OP1 A A 225 164.565 -39.372-144.189 1.00 67.94 O
ATOM 4 OP2 A A 225 166.282 -41.276-144.144 1.00 59.47 O
ATOM 5 O5' A A 225 166.847 -39.069-145.244 1.00 48.21 O
ATOM 6 C5' A A 225 166.950 -37.654-145.281 1.00 44.55 C
ATOM 7 C4' A A 225 167.822 -37.207-146.426 1.00 47.93 C
ATOM 8 O4' A A 225 169.215 -37.426-146.107 1.00 56.28 O
ATOM 9 C3' A A 225 167.629 -37.951-147.725 1.00 47.77 C
ATOM 10 O3' A A 225 166.516 -37.478-148.446 1.00 52.28 O
ATOM 11 C2' A A 225 168.959 -37.748-148.449 1.00 47.86 C
ATOM 12 O2' A A 225 168.961 -36.528-149.175 1.00 65.74 O
ATOM 13 C1' A A 225 169.951 -37.622-147.292 1.00 45.19 C
ATOM 14 N9 A A 225 170.788 -38.821-147.146 1.00 50.01 N
ATOM 15 C8 A A 225 170.572 -39.917-146.339 1.00 53.03 C
ATOM 16 N7 A A 225 171.505 -40.848-146.428 1.00 50.58 N
ATOM 17 C5 A A 225 172.384 -40.311-147.358 1.00 52.87 C
ATOM 18 C6 A A 225 173.582 -40.821-147.872 1.00 55.44 C
ATOM 19 N6 A A 225 174.030 -42.030-147.467 1.00 51.30 N
ATOM 20 N1 A A 225 174.255 -40.046-148.788 1.00 47.70 N
ATOM 21 C2 A A 225 173.722 -38.867-149.144 1.00 43.41 C
ATOM 22 N3 A A 225 172.606 -38.277-148.713 1.00 46.30 N
ATOM 23 C4 A A 225 171.973 -39.059-147.811 1.00 52.50 C
ATOM 24 P G A 226 165.687 -38.471-149.398 1.00 54.71 P
ATOM 25 OP1 G A 226 164.561 -37.686-149.960 1.00 64.51 O
ATOM 26 OP2 G A 226 165.385 -39.706-148.610 1.00 49.51 O
ATOM 27 O5' G A 226 166.732 -38.797-150.541 1.00 42.67 O
TER

ATOM 1 O3' U B 398 181.140 -40.834-151.501 1.00 57.03 O
ATOM 2 P U B 399 180.811 -41.880-150.328 1.00 55.46 P
ATOM 3 OP1 U B 399 181.012 -41.167-149.032 1.00 47.17 O
ATOM 4 OP2 U B 399 181.600 -43.115-150.608 1.00 61.24 O
ATOM 5 O5' U B 399 179.272 -42.174-150.544 1.00 60.29 O
ATOM 6 C5' U B 399 178.590 -43.081-149.695 1.00 55.56 C
ATOM 7 C4' U B 399 177.281 -43.513-150.299 1.00 48.80 C
ATOM 8 O4' U B 399 176.252 -42.536-150.001 1.00 45.64 O
ATOM 9 C3' U B 399 177.282 -43.654-151.812 1.00 41.41 C
ATOM 10 O3' U B 399 177.711 -44.945-152.206 1.00 46.25 O
ATOM 11 C2' U B 399 175.840 -43.342-152.200 1.00 45.23 C
ATOM 12 O2' U B 399 175.031 -44.494-152.079 1.00 44.86 O
ATOM 13 C1' U B 399 175.417 -42.353-151.113 1.00 45.98 C
ATOM 14 N1 U B 399 175.542 -40.962-151.544 1.00 50.00 N
ATOM 15 C2 U B 399 174.494 -40.453-152.280 1.00 48.67 C
ATOM 16 O2 U B 399 173.529 -41.144-152.579 1.00 45.41 O
ATOM 17 N3 U B 399 174.657 -39.132-152.641 1.00 51.24 N
ATOM 18 C4 U B 399 175.735 -38.320-152.317 1.00 51.73 C
ATOM 19 O4 U B 399 175.755 -37.151-152.691 1.00 59.08 O
ATOM 20 C5 U B 399 176.767 -38.942-151.543 1.00 50.63 C
ATOM 21 C6 U B 399 176.642 -40.216-151.177 1.00 45.92 C
ATOM 22 P C B 400 178.275 -45.207-153.683 1.00 60.41 P
ATOM 23 OP1 C B 400 178.468 -46.672-153.824 1.00 50.31 O
ATOM 24 OP2 C B 400 179.454 -44.290-153.885 1.00 61.64 O
ATOM 25 O5' C B 400 177.071 -44.758-154.586 1.00 34.96 O
TER

Atoms:
OP1: (164.565,-39.372,-144.189)
OP2: (166.282,-41.276,-144.144)
C3': (167.629,-37.951,-147.725)
C1': (169.951,-37.622,-147.292)
C5': (166.950,-37.654,-145.281)
O4': (169.215,-37.426,-146.107)
C8: (170.572,-39.917,-146.339)
O2': (168.961,-36.528,-149.175)
C6: (173.582,-40.821,-147.872)
C5: (172.384,-40.311,-147.358)
C4: (171.973,-39.059,-147.811)
P: (165.984,-39.814,-144.119)
C4': (167.822,-37.207,-146.426)
C2': (168.959,-37.748,-148.449)
C2: (173.722,-38.867,-149.144)
N1: (174.255,-40.046,-148.788)
N3: (172.606,-38.277,-148.713)
N6: (174.030,-42.030,-147.467)
N7: (171.505,-40.848,-146.428)
N9: (170.788,-38.821,-147.146)
O5': (166.847,-39.069,-145.244)
O3': (166.516,-37.478,-148.446)
C4: (175.735,-38.320,-152.317)
N3: (174.657,-39.132,-152.641)
OP1: (181.012,-41.167,-149.032)
OP2: (181.600,-43.115,-150.608)
C2: (174.494,-40.453,-152.280)
C1': (175.417,-42.353,-151.113)
C3': (177.282,-43.654,-151.812)
O5': (179.272,-42.174,-150.544)
O4': (176.252,-42.536,-150.001)
C5': (178.590,-43.081,-149.695)
P: (180.811,-41.880,-150.328)
C4': (177.281,-43.513,-150.299)
C2': (175.840,-43.342,-152.200)
O2': (175.031,-44.494,-152.079)
N1: (175.542,-40.962,-151.544)
O4: (175.755,-37.151,-152.691)
O2: (173.529,-41.144,-152.579)
C6: (176.642,-40.216,-151.177)
C5: (176.767,-38.942,-151.543)
O3': (177.711,-44.945,-152.206)
Image (generated by PyMOL):
PyMOL image
show in jmol