ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:0592:0595

Extra

PDB:
ATOM 1 O3' A A 591 -5.470 133.199 89.227 1.00 71.41 O
ATOM 2 P G A 592 -4.612 134.327 89.999 1.00 72.53 P
ATOM 3 OP1 G A 592 -5.345 134.743 91.239 1.00 70.92 O
ATOM 4 OP2 G A 592 -4.240 135.355 88.983 1.00 71.99 O
ATOM 5 O5' G A 592 -3.287 133.546 90.433 1.00 69.11 O
ATOM 6 C5' G A 592 -2.452 134.010 91.520 1.00 64.67 C
ATOM 7 C4' G A 592 -1.684 132.847 92.114 1.00 61.34 C
ATOM 8 O4' G A 592 -1.043 132.100 91.046 1.00 59.50 O
ATOM 9 C3' G A 592 -0.583 133.194 93.118 1.00 60.63 C
ATOM 10 O3' G A 592 -0.443 132.174 94.106 1.00 61.06 O
ATOM 11 C2' G A 592 0.677 133.161 92.256 1.00 58.93 C
ATOM 12 O2' G A 592 1.837 132.836 93.009 1.00 58.00 O
ATOM 13 C1' G A 592 0.350 132.027 91.283 1.00 56.53 C
ATOM 14 N9 G A 592 1.031 132.131 89.996 1.00 51.83 N
ATOM 15 C8 G A 592 1.243 133.271 89.257 1.00 50.43 C
ATOM 16 N7 G A 592 1.881 133.047 88.141 1.00 49.37 N
ATOM 17 C5 G A 592 2.107 131.678 88.143 1.00 47.92 C
ATOM 18 C6 G A 592 2.760 130.861 87.192 1.00 47.93 C
ATOM 19 O6 G A 592 3.317 131.201 86.133 1.00 50.81 O
ATOM 20 N1 G A 592 2.740 129.523 87.569 1.00 46.15 N
ATOM 21 C2 G A 592 2.180 129.037 88.724 1.00 47.58 C
ATOM 22 N2 G A 592 2.249 127.706 88.902 1.00 47.12 N
ATOM 23 N3 G A 592 1.591 129.796 89.635 1.00 48.13 N
ATOM 24 C4 G A 592 1.586 131.097 89.278 1.00 48.89 C
ATOM 25 P C A 593 -1.738 131.602 94.862 1.00 60.92 P
ATOM 26 OP1 C A 593 -2.821 132.623 94.775 1.00 60.81 O
ATOM 27 OP2 C A 593 -1.288 131.123 96.198 1.00 58.57 O
ATOM 28 O5' C A 593 -2.144 130.350 93.952 1.00 59.17 O
TER

ATOM 1 O3' C B 594 1.674 121.760 91.695 1.00 42.43 O
ATOM 2 P G B 595 3.220 122.221 91.621 1.00 42.43 P
ATOM 3 OP1 G B 595 4.001 121.292 92.494 1.00 42.81 O
ATOM 4 OP2 G B 595 3.298 123.695 91.844 1.00 40.39 O
ATOM 5 O5' G B 595 3.638 121.918 90.118 1.00 39.70 O
ATOM 6 C5' G B 595 3.531 120.591 89.606 1.00 38.56 C
ATOM 7 C4' G B 595 3.694 120.589 88.111 1.00 37.73 C
ATOM 8 O4' G B 595 2.723 121.477 87.500 1.00 37.34 O
ATOM 9 C3' G B 595 5.015 121.098 87.581 1.00 36.77 C
ATOM 10 O3' G B 595 5.988 120.065 87.690 1.00 38.04 O
ATOM 11 C2' G B 595 4.652 121.408 86.133 1.00 35.57 C
ATOM 12 O2' G B 595 4.507 120.226 85.370 1.00 37.23 O
ATOM 13 C1' G B 595 3.255 122.004 86.299 1.00 32.49 C
ATOM 14 N9 G B 595 3.237 123.455 86.403 1.00 29.82 N
ATOM 15 C8 G B 595 2.899 124.203 87.505 1.00 28.48 C
ATOM 16 N7 G B 595 2.948 125.489 87.285 1.00 29.06 N
ATOM 17 C5 G B 595 3.349 125.593 85.960 1.00 29.05 C
ATOM 18 C6 G B 595 3.571 126.741 85.155 1.00 30.43 C
ATOM 19 O6 G B 595 3.468 127.944 85.475 1.00 30.74 O
ATOM 20 N1 G B 595 3.956 126.391 83.858 1.00 29.20 N
ATOM 21 C2 G B 595 4.117 125.103 83.403 1.00 30.35 C
ATOM 22 N2 G B 595 4.487 124.958 82.107 1.00 30.59 N
ATOM 23 N3 G B 595 3.926 124.028 84.155 1.00 31.00 N
ATOM 24 C4 G B 595 3.540 124.346 85.407 1.00 29.51 C
ATOM 25 P A B 596 7.489 120.430 88.132 1.00 40.04 P
ATOM 26 OP1 A B 596 8.310 119.213 87.889 1.00 38.17 O
ATOM 27 OP2 A B 596 7.484 121.060 89.476 1.00 39.00 O
ATOM 28 O5' A B 596 7.904 121.588 87.120 1.00 40.90 O
TER

Atoms:
OP1: (-5.345,134.743,91.239)
OP2: (-4.240,135.355,88.983)
C3': (-0.583,133.194,93.118)
C1': (0.350,132.027,91.283)
C5': (-2.452,134.010,91.520)
O6: (3.317,131.201,86.133)
O4': (-1.043,132.100,91.046)
C8: (1.243,133.271,89.257)
C2: (2.180,129.037,88.724)
C6: (2.760,130.861,87.192)
C5: (2.107,131.678,88.143)
C4: (1.586,131.097,89.278)
P: (-4.612,134.327,89.999)
C4': (-1.684,132.847,92.114)
C2': (0.677,133.161,92.256)
O2': (1.837,132.836,93.009)
N1: (2.740,129.523,87.569)
N2: (2.249,127.706,88.902)
N3: (1.591,129.796,89.635)
N7: (1.881,133.047,88.141)
N9: (1.031,132.131,89.996)
O5': (-3.287,133.546,90.433)
O3': (-0.443,132.174,94.106)
OP1: (4.001,121.292,92.494)
OP2: (3.298,123.695,91.844)
C3': (5.015,121.098,87.581)
C1': (3.255,122.004,86.299)
C5': (3.531,120.591,89.606)
O6: (3.468,127.944,85.475)
O4': (2.723,121.477,87.500)
C8: (2.899,124.203,87.505)
C2: (4.117,125.103,83.403)
C6: (3.571,126.741,85.155)
C5: (3.349,125.593,85.960)
C4: (3.540,124.346,85.407)
P: (3.220,122.221,91.621)
C4': (3.694,120.589,88.111)
C2': (4.652,121.408,86.133)
O2': (4.507,120.226,85.370)
N1: (3.956,126.391,83.858)
N2: (4.487,124.958,82.107)
N3: (3.926,124.028,84.155)
N7: (2.948,125.489,87.285)
N9: (3.237,123.455,86.403)
O5': (3.638,121.918,90.118)
O3': (5.988,120.065,87.690)
Image (generated by PyMOL):
PyMOL image
show in jmol