ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0592:0595

Extra

PDB:
ATOM 1 O3' A A 591 -5.670 133.301 89.134 1.00 78.62 O
ATOM 2 P G A 592 -4.947 134.207 90.264 1.00 79.58 P
ATOM 3 OP1 G A 592 -5.854 134.367 91.437 1.00 79.15 O
ATOM 4 OP2 G A 592 -4.469 135.417 89.545 1.00 78.61 O
ATOM 5 O5' G A 592 -3.650 133.371 90.697 1.00 76.33 O
ATOM 6 C5' G A 592 -2.702 133.894 91.676 1.00 71.08 C
ATOM 7 C4' G A 592 -1.839 132.775 92.242 1.00 67.53 C
ATOM 8 O4' G A 592 -1.119 132.109 91.165 1.00 65.55 O
ATOM 9 C3' G A 592 -0.772 133.193 93.262 1.00 66.59 C
ATOM 10 O3' G A 592 -0.523 132.159 94.219 1.00 67.68 O
ATOM 11 C2' G A 592 0.489 133.284 92.406 1.00 64.59 C
ATOM 12 O2' G A 592 1.663 133.065 93.167 1.00 63.23 O
ATOM 13 C1' G A 592 0.271 132.117 91.445 1.00 61.50 C
ATOM 14 N9 G A 592 0.998 132.201 90.180 1.00 55.37 N
ATOM 15 C8 G A 592 1.229 133.324 89.422 1.00 53.86 C
ATOM 16 N7 G A 592 1.870 133.071 88.315 1.00 51.86 N
ATOM 17 C5 G A 592 2.085 131.701 88.347 1.00 51.67 C
ATOM 18 C6 G A 592 2.721 130.852 87.408 1.00 51.46 C
ATOM 19 O6 G A 592 3.242 131.155 86.325 1.00 54.82 O
ATOM 20 N1 G A 592 2.716 129.529 87.828 1.00 49.48 N
ATOM 21 C2 G A 592 2.176 129.077 89.006 1.00 50.97 C
ATOM 22 N2 G A 592 2.275 127.758 89.236 1.00 48.26 N
ATOM 23 N3 G A 592 1.580 129.861 89.896 1.00 51.54 N
ATOM 24 C4 G A 592 1.567 131.151 89.499 1.00 52.41 C
ATOM 25 P C A 593 -1.737 131.509 95.042 1.00 67.54 P
ATOM 26 OP1 C A 593 -2.846 132.500 95.085 1.00 67.82 O
ATOM 27 OP2 C A 593 -1.185 130.973 96.314 1.00 65.20 O
ATOM 28 O5' C A 593 -2.172 130.279 94.116 1.00 66.43 O
TER

ATOM 1 O3' C B 594 1.723 121.676 91.977 1.00 47.92 O
ATOM 2 P G B 595 3.276 122.077 91.835 1.00 47.16 P
ATOM 3 OP1 G B 595 4.057 121.121 92.667 1.00 45.66 O
ATOM 4 OP2 G B 595 3.401 123.543 92.068 1.00 44.04 O
ATOM 5 O5' G B 595 3.619 121.770 90.311 1.00 43.42 O
ATOM 6 C5' G B 595 3.512 120.435 89.800 1.00 41.65 C
ATOM 7 C4' G B 595 3.706 120.427 88.305 1.00 41.35 C
ATOM 8 O4' G B 595 2.723 121.286 87.671 1.00 40.74 O
ATOM 9 C3' G B 595 5.030 120.977 87.816 1.00 41.29 C
ATOM 10 O3' G B 595 6.042 119.981 87.908 1.00 42.93 O
ATOM 11 C2' G B 595 4.708 121.337 86.374 1.00 38.20 C
ATOM 12 O2' G B 595 4.687 120.194 85.545 1.00 41.57 O
ATOM 13 C1' G B 595 3.282 121.870 86.511 1.00 37.49 C
ATOM 14 N9 G B 595 3.224 123.318 86.648 1.00 34.38 N
ATOM 15 C8 G B 595 2.897 124.042 87.767 1.00 32.73 C
ATOM 16 N7 G B 595 2.936 125.330 87.574 1.00 33.45 N
ATOM 17 C5 G B 595 3.308 125.464 86.243 1.00 36.15 C
ATOM 18 C6 G B 595 3.511 126.625 85.454 1.00 36.65 C
ATOM 19 O6 G B 595 3.391 127.815 85.783 1.00 40.31 O
ATOM 20 N1 G B 595 3.890 126.300 84.155 1.00 35.90 N
ATOM 21 C2 G B 595 4.053 125.027 83.674 1.00 34.82 C
ATOM 22 N2 G B 595 4.428 124.920 82.391 1.00 35.47 N
ATOM 23 N3 G B 595 3.864 123.940 84.395 1.00 35.78 N
ATOM 24 C4 G B 595 3.493 124.230 85.661 1.00 35.78 C
ATOM 25 P A B 596 7.523 120.393 88.368 1.00 42.85 P
ATOM 26 OP1 A B 596 8.370 119.196 88.178 1.00 42.59 O
ATOM 27 OP2 A B 596 7.442 121.035 89.705 1.00 44.16 O
ATOM 28 O5' A B 596 7.949 121.533 87.339 1.00 42.94 O
TER

Atoms:
OP1: (-5.854,134.367,91.437)
OP2: (-4.469,135.417,89.545)
C3': (-0.772,133.193,93.262)
C1': (0.271,132.117,91.445)
C5': (-2.702,133.894,91.676)
O6: (3.242,131.155,86.325)
O4': (-1.119,132.109,91.165)
C8: (1.229,133.324,89.422)
C2: (2.176,129.077,89.006)
C6: (2.721,130.852,87.408)
C5: (2.085,131.701,88.347)
C4: (1.567,131.151,89.499)
P: (-4.947,134.207,90.264)
C4': (-1.839,132.775,92.242)
C2': (0.489,133.284,92.406)
O2': (1.663,133.065,93.167)
N1: (2.716,129.529,87.828)
N2: (2.275,127.758,89.236)
N3: (1.580,129.861,89.896)
N7: (1.870,133.071,88.315)
N9: (0.998,132.201,90.180)
O5': (-3.650,133.371,90.697)
O3': (-0.523,132.159,94.219)
OP1: (4.057,121.121,92.667)
OP2: (3.401,123.543,92.068)
C3': (5.030,120.977,87.816)
C1': (3.282,121.870,86.511)
C5': (3.512,120.435,89.800)
O6: (3.391,127.815,85.783)
O4': (2.723,121.286,87.671)
C8: (2.897,124.042,87.767)
C2: (4.053,125.027,83.674)
C6: (3.511,126.625,85.454)
C5: (3.308,125.464,86.243)
C4: (3.493,124.230,85.661)
P: (3.276,122.077,91.835)
C4': (3.706,120.427,88.305)
C2': (4.708,121.337,86.374)
O2': (4.687,120.194,85.545)
N1: (3.890,126.300,84.155)
N2: (4.428,124.920,82.391)
N3: (3.864,123.940,84.395)
N7: (2.936,125.330,87.574)
N9: (3.224,123.318,86.648)
O5': (3.619,121.770,90.311)
O3': (6.042,119.981,87.908)
Image (generated by PyMOL):
PyMOL image
show in jmol