Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:69:610
Extra
PDB:
ATOM 1 O3' U A 8 245.884 0.406 249.501 1.00 51.82 O
ATOM 2 P G A 9 245.653 -0.300 250.914 1.00 52.81 P
ATOM 3 OP1 G A 9 244.651 -1.373 250.733 1.00 52.76 O
ATOM 4 OP2 G A 9 245.382 0.784 251.877 1.00 52.56 O
ATOM 5 O5' G A 9 247.056 -0.949 251.248 1.00 53.58 O
ATOM 6 C5' G A 9 247.387 -1.276 252.581 1.00 54.05 C
ATOM 7 C4' G A 9 248.774 -1.819 252.674 1.00 54.77 C
ATOM 8 O4' G A 9 248.916 -2.932 251.766 1.00 55.00 O
ATOM 9 C3' G A 9 249.879 -0.875 252.281 1.00 54.85 C
ATOM 10 O3' G A 9 250.253 -0.026 253.349 1.00 54.97 O
ATOM 11 C2' G A 9 250.976 -1.838 251.881 1.00 55.53 C
ATOM 12 O2' G A 9 251.557 -2.406 253.035 1.00 56.17 O
ATOM 13 C1' G A 9 250.191 -2.933 251.210 1.00 55.42 C
ATOM 14 N9 G A 9 250.060 -2.752 249.766 1.00 55.08 N
ATOM 15 C8 G A 9 248.866 -2.698 249.113 1.00 54.49 C
ATOM 16 N7 G A 9 248.988 -2.607 247.829 1.00 54.35 N
ATOM 17 C5 G A 9 250.365 -2.636 247.616 1.00 54.89 C
ATOM 18 C6 G A 9 251.133 -2.572 246.412 1.00 55.07 C
ATOM 19 O6 G A 9 250.741 -2.463 245.243 1.00 54.78 O
ATOM 20 N1 G A 9 252.497 -2.629 246.674 1.00 55.70 N
ATOM 21 C2 G A 9 253.019 -2.732 247.935 1.00 56.10 C
ATOM 22 N2 G A 9 254.352 -2.763 248.039 1.00 56.73 N
ATOM 23 N3 G A 9 252.319 -2.818 249.044 1.00 55.96 N
ATOM 24 C4 G A 9 251.020 -2.751 248.813 1.00 55.34 C
ATOM 25 P A A 10 250.408 1.566 253.139 1.00 55.26 P
ATOM 26 OP1 A A 10 250.748 2.145 254.473 1.00 55.53 O
ATOM 27 OP2 A A 10 249.177 2.061 252.429 1.00 54.47 O
ATOM 28 O5' A A 10 251.667 1.683 252.202 1.00 55.59 O
TER
ATOM 1 O3' G B 9 250.253 -0.026 253.349 1.00 54.97 O
ATOM 2 P A B 10 250.408 1.566 253.139 1.00 55.26 P
ATOM 3 OP1 A B 10 250.748 2.145 254.473 1.00 55.53 O
ATOM 4 OP2 A B 10 249.177 2.061 252.429 1.00 54.47 O
ATOM 5 O5' A B 10 251.667 1.683 252.202 1.00 55.59 O
ATOM 6 C5' A B 10 252.965 1.720 252.755 1.00 56.26 C
ATOM 7 C4' A B 10 253.972 1.342 251.733 1.00 56.64 C
ATOM 8 O4' A B 10 253.476 0.225 250.959 1.00 56.58 O
ATOM 9 C3' A B 10 254.261 2.387 250.681 1.00 56.33 C
ATOM 10 O3' A B 10 255.094 3.420 251.157 1.00 56.55 O
ATOM 11 C2' A B 10 254.885 1.537 249.580 1.00 56.68 C
ATOM 12 O2' A B 10 256.215 1.172 249.893 1.00 57.47 O
ATOM 13 C1' A B 10 254.016 0.281 249.658 1.00 56.61 C
ATOM 14 N9 A B 10 252.927 0.367 248.704 1.00 55.96 N
ATOM 15 C8 A B 10 251.610 0.511 248.914 1.00 55.36 C
ATOM 16 N7 A B 10 250.960 0.645 247.796 1.00 54.90 N
ATOM 17 C5 A B 10 251.937 0.616 246.809 1.00 55.23 C
ATOM 18 C6 A B 10 251.936 0.710 245.404 1.00 55.08 C
ATOM 19 N6 A B 10 250.829 0.852 244.696 1.00 54.52 N
ATOM 20 N1 A B 10 253.100 0.643 244.726 1.00 55.58 N
ATOM 21 C2 A B 10 254.204 0.487 245.419 1.00 56.18 C
ATOM 22 N3 A B 10 254.310 0.380 246.724 1.00 56.37 N
ATOM 23 C4 A B 10 253.152 0.452 247.370 1.00 55.88 C
ATOM 24 P U B 11 254.815 4.969 250.796 1.00 54.48 P
ATOM 25 OP1 U B 11 255.765 5.777 251.637 1.00 54.91 O
ATOM 26 OP2 U B 11 253.358 5.219 250.942 1.00 53.74 O
ATOM 27 O5' U B 11 255.233 5.051 249.238 1.00 54.43 O
TER
ATOM 2 P G A 9 245.653 -0.300 250.914 1.00 52.81 P
ATOM 3 OP1 G A 9 244.651 -1.373 250.733 1.00 52.76 O
ATOM 4 OP2 G A 9 245.382 0.784 251.877 1.00 52.56 O
ATOM 5 O5' G A 9 247.056 -0.949 251.248 1.00 53.58 O
ATOM 6 C5' G A 9 247.387 -1.276 252.581 1.00 54.05 C
ATOM 7 C4' G A 9 248.774 -1.819 252.674 1.00 54.77 C
ATOM 8 O4' G A 9 248.916 -2.932 251.766 1.00 55.00 O
ATOM 9 C3' G A 9 249.879 -0.875 252.281 1.00 54.85 C
ATOM 10 O3' G A 9 250.253 -0.026 253.349 1.00 54.97 O
ATOM 11 C2' G A 9 250.976 -1.838 251.881 1.00 55.53 C
ATOM 12 O2' G A 9 251.557 -2.406 253.035 1.00 56.17 O
ATOM 13 C1' G A 9 250.191 -2.933 251.210 1.00 55.42 C
ATOM 14 N9 G A 9 250.060 -2.752 249.766 1.00 55.08 N
ATOM 15 C8 G A 9 248.866 -2.698 249.113 1.00 54.49 C
ATOM 16 N7 G A 9 248.988 -2.607 247.829 1.00 54.35 N
ATOM 17 C5 G A 9 250.365 -2.636 247.616 1.00 54.89 C
ATOM 18 C6 G A 9 251.133 -2.572 246.412 1.00 55.07 C
ATOM 19 O6 G A 9 250.741 -2.463 245.243 1.00 54.78 O
ATOM 20 N1 G A 9 252.497 -2.629 246.674 1.00 55.70 N
ATOM 21 C2 G A 9 253.019 -2.732 247.935 1.00 56.10 C
ATOM 22 N2 G A 9 254.352 -2.763 248.039 1.00 56.73 N
ATOM 23 N3 G A 9 252.319 -2.818 249.044 1.00 55.96 N
ATOM 24 C4 G A 9 251.020 -2.751 248.813 1.00 55.34 C
ATOM 25 P A A 10 250.408 1.566 253.139 1.00 55.26 P
ATOM 26 OP1 A A 10 250.748 2.145 254.473 1.00 55.53 O
ATOM 27 OP2 A A 10 249.177 2.061 252.429 1.00 54.47 O
ATOM 28 O5' A A 10 251.667 1.683 252.202 1.00 55.59 O
TER
ATOM 1 O3' G B 9 250.253 -0.026 253.349 1.00 54.97 O
ATOM 2 P A B 10 250.408 1.566 253.139 1.00 55.26 P
ATOM 3 OP1 A B 10 250.748 2.145 254.473 1.00 55.53 O
ATOM 4 OP2 A B 10 249.177 2.061 252.429 1.00 54.47 O
ATOM 5 O5' A B 10 251.667 1.683 252.202 1.00 55.59 O
ATOM 6 C5' A B 10 252.965 1.720 252.755 1.00 56.26 C
ATOM 7 C4' A B 10 253.972 1.342 251.733 1.00 56.64 C
ATOM 8 O4' A B 10 253.476 0.225 250.959 1.00 56.58 O
ATOM 9 C3' A B 10 254.261 2.387 250.681 1.00 56.33 C
ATOM 10 O3' A B 10 255.094 3.420 251.157 1.00 56.55 O
ATOM 11 C2' A B 10 254.885 1.537 249.580 1.00 56.68 C
ATOM 12 O2' A B 10 256.215 1.172 249.893 1.00 57.47 O
ATOM 13 C1' A B 10 254.016 0.281 249.658 1.00 56.61 C
ATOM 14 N9 A B 10 252.927 0.367 248.704 1.00 55.96 N
ATOM 15 C8 A B 10 251.610 0.511 248.914 1.00 55.36 C
ATOM 16 N7 A B 10 250.960 0.645 247.796 1.00 54.90 N
ATOM 17 C5 A B 10 251.937 0.616 246.809 1.00 55.23 C
ATOM 18 C6 A B 10 251.936 0.710 245.404 1.00 55.08 C
ATOM 19 N6 A B 10 250.829 0.852 244.696 1.00 54.52 N
ATOM 20 N1 A B 10 253.100 0.643 244.726 1.00 55.58 N
ATOM 21 C2 A B 10 254.204 0.487 245.419 1.00 56.18 C
ATOM 22 N3 A B 10 254.310 0.380 246.724 1.00 56.37 N
ATOM 23 C4 A B 10 253.152 0.452 247.370 1.00 55.88 C
ATOM 24 P U B 11 254.815 4.969 250.796 1.00 54.48 P
ATOM 25 OP1 U B 11 255.765 5.777 251.637 1.00 54.91 O
ATOM 26 OP2 U B 11 253.358 5.219 250.942 1.00 53.74 O
ATOM 27 O5' U B 11 255.233 5.051 249.238 1.00 54.43 O
TER
Atoms:
OP1: (244.651,-1.373,250.733)
OP2: (245.382,0.784,251.877)
C3': (249.879,-0.875,252.281)
C1': (250.191,-2.933,251.210)
C5': (247.387,-1.276,252.581)
O6: (250.741,-2.463,245.243)
O4': (248.916,-2.932,251.766)
C8: (248.866,-2.698,249.113)
C2: (253.019,-2.732,247.935)
C6: (251.133,-2.572,246.412)
C5: (250.365,-2.636,247.616)
C4: (251.020,-2.751,248.813)
P: (245.653,-0.300,250.914)
C4': (248.774,-1.819,252.674)
C2': (250.976,-1.838,251.881)
O2': (251.557,-2.406,253.035)
N1: (252.497,-2.629,246.674)
N2: (254.352,-2.763,248.039)
N3: (252.319,-2.818,249.044)
N7: (248.988,-2.607,247.829)
N9: (250.060,-2.752,249.766)
O5': (247.056,-0.949,251.248)
O3': (250.253,-0.026,253.349)
OP2: (245.382,0.784,251.877)
C3': (249.879,-0.875,252.281)
C1': (250.191,-2.933,251.210)
C5': (247.387,-1.276,252.581)
O6: (250.741,-2.463,245.243)
O4': (248.916,-2.932,251.766)
C8: (248.866,-2.698,249.113)
C2: (253.019,-2.732,247.935)
C6: (251.133,-2.572,246.412)
C5: (250.365,-2.636,247.616)
C4: (251.020,-2.751,248.813)
P: (245.653,-0.300,250.914)
C4': (248.774,-1.819,252.674)
C2': (250.976,-1.838,251.881)
O2': (251.557,-2.406,253.035)
N1: (252.497,-2.629,246.674)
N2: (254.352,-2.763,248.039)
N3: (252.319,-2.818,249.044)
N7: (248.988,-2.607,247.829)
N9: (250.060,-2.752,249.766)
O5': (247.056,-0.949,251.248)
O3': (250.253,-0.026,253.349)
OP1: (250.748,2.145,254.473)
OP2: (249.177,2.061,252.429)
C3': (254.261,2.387,250.681)
C1': (254.016,0.281,249.658)
C5': (252.965,1.720,252.755)
O4': (253.476,0.225,250.959)
C8: (251.610,0.511,248.914)
O2': (256.215,1.172,249.893)
C6: (251.936,0.710,245.404)
C5: (251.937,0.616,246.809)
C4: (253.152,0.452,247.370)
P: (250.408,1.566,253.139)
C4': (253.972,1.342,251.733)
C2': (254.885,1.537,249.580)
C2: (254.204,0.487,245.419)
N1: (253.100,0.643,244.726)
N3: (254.310,0.380,246.724)
N6: (250.829,0.852,244.696)
N7: (250.960,0.645,247.796)
N9: (252.927,0.367,248.704)
O5': (251.667,1.683,252.202)
O3': (255.094,3.420,251.157)
OP2: (249.177,2.061,252.429)
C3': (254.261,2.387,250.681)
C1': (254.016,0.281,249.658)
C5': (252.965,1.720,252.755)
O4': (253.476,0.225,250.959)
C8: (251.610,0.511,248.914)
O2': (256.215,1.172,249.893)
C6: (251.936,0.710,245.404)
C5: (251.937,0.616,246.809)
C4: (253.152,0.452,247.370)
P: (250.408,1.566,253.139)
C4': (253.972,1.342,251.733)
C2': (254.885,1.537,249.580)
C2: (254.204,0.487,245.419)
N1: (253.100,0.643,244.726)
N3: (254.310,0.380,246.724)
N6: (250.829,0.852,244.696)
N7: (250.960,0.645,247.796)
N9: (252.927,0.367,248.704)
O5': (251.667,1.683,252.202)
O3': (255.094,3.420,251.157)
Image (generated by PyMOL):