ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0592:0595

Extra

PDB:
ATOM 1 O3' A A 591 -5.703 133.249 89.120 1.00 82.42 O
ATOM 2 P G A 592 -4.981 134.153 90.256 1.00 83.30 P
ATOM 3 OP1 G A 592 -5.893 134.328 91.423 1.00 83.03 O
ATOM 4 OP2 G A 592 -4.471 135.353 89.543 1.00 83.31 O
ATOM 5 O5' G A 592 -3.697 133.307 90.702 1.00 80.54 O
ATOM 6 C5' G A 592 -2.743 133.839 91.660 1.00 75.18 C
ATOM 7 C4' G A 592 -1.877 132.728 92.231 1.00 71.35 C
ATOM 8 O4' G A 592 -1.153 132.065 91.156 1.00 69.14 O
ATOM 9 C3' G A 592 -0.814 133.167 93.245 1.00 70.51 C
ATOM 10 O3' G A 592 -0.565 132.155 94.226 1.00 71.36 O
ATOM 11 C2' G A 592 0.446 133.264 92.388 1.00 68.33 C
ATOM 12 O2' G A 592 1.627 133.075 93.146 1.00 67.55 O
ATOM 13 C1' G A 592 0.238 132.094 91.428 1.00 65.52 C
ATOM 14 N9 G A 592 0.951 132.202 90.159 1.00 60.55 N
ATOM 15 C8 G A 592 1.169 133.341 89.421 1.00 58.94 C
ATOM 16 N7 G A 592 1.810 133.115 88.307 1.00 57.30 N
ATOM 17 C5 G A 592 2.038 131.747 88.313 1.00 56.59 C
ATOM 18 C6 G A 592 2.681 130.924 87.359 1.00 55.87 C
ATOM 19 O6 G A 592 3.207 131.255 86.290 1.00 57.75 O
ATOM 20 N1 G A 592 2.676 129.589 87.746 1.00 54.72 N
ATOM 21 C2 G A 592 2.129 129.106 88.906 1.00 55.87 C
ATOM 22 N2 G A 592 2.216 127.779 89.094 1.00 54.11 N
ATOM 23 N3 G A 592 1.535 129.867 89.815 1.00 57.34 N
ATOM 24 C4 G A 592 1.521 131.168 89.452 1.00 57.73 C
ATOM 25 P C A 593 -1.784 131.502 95.045 1.00 70.41 P
ATOM 26 OP1 C A 593 -2.925 132.458 95.028 1.00 70.66 O
ATOM 27 OP2 C A 593 -1.241 131.038 96.348 1.00 69.36 O
ATOM 28 O5' C A 593 -2.158 130.227 94.154 1.00 69.00 O
TER

ATOM 1 O3' C B 594 1.707 121.641 91.911 1.00 50.23 O
ATOM 2 P G B 595 3.256 122.052 91.763 1.00 48.73 P
ATOM 3 OP1 G B 595 4.046 121.083 92.580 1.00 47.42 O
ATOM 4 OP2 G B 595 3.351 123.513 92.043 1.00 45.40 O
ATOM 5 O5' G B 595 3.587 121.776 90.228 1.00 44.86 O
ATOM 6 C5' G B 595 3.461 120.450 89.690 1.00 45.39 C
ATOM 7 C4' G B 595 3.656 120.457 88.192 1.00 45.25 C
ATOM 8 O4' G B 595 2.662 121.297 87.548 1.00 44.59 O
ATOM 9 C3' G B 595 4.973 121.022 87.707 1.00 46.03 C
ATOM 10 O3' G B 595 5.996 120.038 87.812 1.00 47.35 O
ATOM 11 C2' G B 595 4.653 121.364 86.259 1.00 43.85 C
ATOM 12 O2' G B 595 4.650 120.214 85.438 1.00 47.17 O
ATOM 13 C1' G B 595 3.222 121.885 86.387 1.00 42.40 C
ATOM 14 N9 G B 595 3.163 123.333 86.531 1.00 40.01 N
ATOM 15 C8 G B 595 2.836 124.045 87.657 1.00 37.86 C
ATOM 16 N7 G B 595 2.873 125.335 87.476 1.00 38.00 N
ATOM 17 C5 G B 595 3.248 125.482 86.148 1.00 39.69 C
ATOM 18 C6 G B 595 3.449 126.656 85.373 1.00 40.36 C
ATOM 19 O6 G B 595 3.327 127.841 85.721 1.00 42.14 O
ATOM 20 N1 G B 595 3.828 126.349 84.066 1.00 39.25 N
ATOM 21 C2 G B 595 3.990 125.078 83.570 1.00 39.72 C
ATOM 22 N2 G B 595 4.363 124.979 82.276 1.00 38.09 N
ATOM 23 N3 G B 595 3.799 123.980 84.284 1.00 39.41 N
ATOM 24 C4 G B 595 3.431 124.256 85.553 1.00 39.41 C
ATOM 25 P A B 596 7.465 120.468 88.292 1.00 44.37 P
ATOM 26 OP1 A B 596 8.331 119.284 88.076 1.00 44.73 O
ATOM 27 OP2 A B 596 7.381 121.095 89.635 1.00 45.68 O
ATOM 28 O5' A B 596 7.877 121.620 87.277 1.00 47.40 O
TER

Atoms:
OP1: (-5.893,134.328,91.423)
OP2: (-4.471,135.353,89.543)
C3': (-0.814,133.167,93.245)
C1': (0.238,132.094,91.428)
C5': (-2.743,133.839,91.660)
O6: (3.207,131.255,86.290)
O4': (-1.153,132.065,91.156)
C8: (1.169,133.341,89.421)
C2: (2.129,129.106,88.906)
C6: (2.681,130.924,87.359)
C5: (2.038,131.747,88.313)
C4: (1.521,131.168,89.452)
P: (-4.981,134.153,90.256)
C4': (-1.877,132.728,92.231)
C2': (0.446,133.264,92.388)
O2': (1.627,133.075,93.146)
N1: (2.676,129.589,87.746)
N2: (2.216,127.779,89.094)
N3: (1.535,129.867,89.815)
N7: (1.810,133.115,88.307)
N9: (0.951,132.202,90.159)
O5': (-3.697,133.307,90.702)
O3': (-0.565,132.155,94.226)
OP1: (4.046,121.083,92.580)
OP2: (3.351,123.513,92.043)
C3': (4.973,121.022,87.707)
C1': (3.222,121.885,86.387)
C5': (3.461,120.450,89.690)
O6: (3.327,127.841,85.721)
O4': (2.662,121.297,87.548)
C8: (2.836,124.045,87.657)
C2: (3.990,125.078,83.570)
C6: (3.449,126.656,85.373)
C5: (3.248,125.482,86.148)
C4: (3.431,124.256,85.553)
P: (3.256,122.052,91.763)
C4': (3.656,120.457,88.192)
C2': (4.653,121.364,86.259)
O2': (4.650,120.214,85.438)
N1: (3.828,126.349,84.066)
N2: (4.363,124.979,82.276)
N3: (3.799,123.980,84.284)
N7: (2.873,125.335,87.476)
N9: (3.163,123.333,86.531)
O5': (3.587,121.776,90.228)
O3': (5.996,120.038,87.812)
Image (generated by PyMOL):
PyMOL image
show in jmol