Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:046:074
Extra
PDB:
ATOM 1 O3' U A 45 55.350 165.681 36.059 1.00 46.86 O
ATOM 2 P G A 46 54.339 166.629 36.878 1.00 48.10 P
ATOM 3 OP1 G A 46 54.048 167.797 36.015 1.00 49.23 O
ATOM 4 OP2 G A 46 54.848 166.849 38.250 1.00 49.23 O
ATOM 5 O5' G A 46 53.011 165.762 36.974 1.00 47.90 O
ATOM 6 C5' G A 46 52.317 165.379 35.787 1.00 45.83 C
ATOM 7 C4' G A 46 50.836 165.419 36.019 1.00 46.23 C
ATOM 8 O4' G A 46 50.463 164.302 36.864 1.00 48.31 O
ATOM 9 C3' G A 46 50.291 166.670 36.702 1.00 47.09 C
ATOM 10 O3' G A 46 49.014 166.964 36.144 1.00 48.90 O
ATOM 11 C2' G A 46 50.129 166.216 38.150 1.00 45.79 C
ATOM 12 O2' G A 46 49.117 166.919 38.837 1.00 45.07 O
ATOM 13 C1' G A 46 49.689 164.773 37.944 1.00 48.94 C
ATOM 14 N9 G A 46 49.837 163.846 39.065 1.00 51.85 N
ATOM 15 C8 G A 46 50.547 164.022 40.233 1.00 52.41 C
ATOM 16 N7 G A 46 50.472 162.994 41.037 1.00 51.87 N
ATOM 17 C5 G A 46 49.670 162.086 40.359 1.00 52.83 C
ATOM 18 C6 G A 46 49.239 160.787 40.725 1.00 52.41 C
ATOM 19 O6 G A 46 49.494 160.154 41.754 1.00 52.87 O
ATOM 20 N1 G A 46 48.433 160.219 39.741 1.00 52.69 N
ATOM 21 C2 G A 46 48.089 160.820 38.557 1.00 51.72 C
ATOM 22 N2 G A 46 47.303 160.113 37.739 1.00 51.60 N
ATOM 23 N3 G A 46 48.487 162.024 38.202 1.00 51.72 N
ATOM 24 C4 G A 46 49.268 162.597 39.143 1.00 52.34 C
ATOM 25 P C A 47 48.772 168.370 35.407 1.00 48.14 P
ATOM 26 OP1 C A 47 47.411 168.365 34.808 1.00 50.00 O
ATOM 27 OP2 C A 47 49.957 168.619 34.542 1.00 46.67 O
ATOM 28 O5' C A 47 48.756 169.414 36.606 1.00 48.17 O
TER
ATOM 1 O3' C B 73 41.717 160.756 34.523 1.00 47.84 O
ATOM 2 P G B 74 41.467 160.181 36.007 1.00 46.58 P
ATOM 3 OP1 G B 74 40.014 160.142 36.316 1.00 44.48 O
ATOM 4 OP2 G B 74 42.385 160.908 36.917 1.00 47.41 O
ATOM 5 O5' G B 74 41.969 158.676 35.893 1.00 47.16 O
ATOM 6 C5' G B 74 41.296 157.735 35.033 1.00 47.25 C
ATOM 7 C4' G B 74 41.571 156.325 35.493 1.00 47.71 C
ATOM 8 O4' G B 74 42.989 156.033 35.366 1.00 47.74 O
ATOM 9 C3' G B 74 41.262 156.061 36.954 1.00 47.80 C
ATOM 10 O3' G B 74 39.889 155.766 37.135 1.00 50.46 O
ATOM 11 C2' G B 74 42.157 154.873 37.253 1.00 48.13 C
ATOM 12 O2' G B 74 41.617 153.681 36.725 1.00 49.34 O
ATOM 13 C1' G B 74 43.416 155.246 36.464 1.00 47.49 C
ATOM 14 N9 G B 74 44.374 156.034 37.238 1.00 48.10 N
ATOM 15 C8 G B 74 44.709 157.354 37.040 1.00 48.41 C
ATOM 16 N7 G B 74 45.585 157.798 37.899 1.00 47.48 N
ATOM 17 C5 G B 74 45.852 156.706 38.712 1.00 48.79 C
ATOM 18 C6 G B 74 46.725 156.581 39.819 1.00 48.75 C
ATOM 19 O6 G B 74 47.470 157.431 40.313 1.00 50.59 O
ATOM 20 N1 G B 74 46.683 155.305 40.358 1.00 47.11 N
ATOM 21 C2 G B 74 45.911 154.278 39.893 1.00 45.88 C
ATOM 22 N2 G B 74 46.017 153.126 40.552 1.00 46.35 N
ATOM 23 N3 G B 74 45.097 154.374 38.859 1.00 46.89 N
ATOM 24 C4 G B 74 45.115 155.608 38.319 1.00 48.13 C
ATOM 25 P C B 75 39.192 156.047 38.554 1.00 55.09 P
ATOM 26 OP1 C B 75 37.775 155.608 38.432 1.00 53.55 O
ATOM 27 OP2 C B 75 39.493 157.436 38.987 1.00 53.40 O
ATOM 28 O5' C B 75 39.940 155.049 39.542 1.00 55.46 O
TER
ATOM 2 P G A 46 54.339 166.629 36.878 1.00 48.10 P
ATOM 3 OP1 G A 46 54.048 167.797 36.015 1.00 49.23 O
ATOM 4 OP2 G A 46 54.848 166.849 38.250 1.00 49.23 O
ATOM 5 O5' G A 46 53.011 165.762 36.974 1.00 47.90 O
ATOM 6 C5' G A 46 52.317 165.379 35.787 1.00 45.83 C
ATOM 7 C4' G A 46 50.836 165.419 36.019 1.00 46.23 C
ATOM 8 O4' G A 46 50.463 164.302 36.864 1.00 48.31 O
ATOM 9 C3' G A 46 50.291 166.670 36.702 1.00 47.09 C
ATOM 10 O3' G A 46 49.014 166.964 36.144 1.00 48.90 O
ATOM 11 C2' G A 46 50.129 166.216 38.150 1.00 45.79 C
ATOM 12 O2' G A 46 49.117 166.919 38.837 1.00 45.07 O
ATOM 13 C1' G A 46 49.689 164.773 37.944 1.00 48.94 C
ATOM 14 N9 G A 46 49.837 163.846 39.065 1.00 51.85 N
ATOM 15 C8 G A 46 50.547 164.022 40.233 1.00 52.41 C
ATOM 16 N7 G A 46 50.472 162.994 41.037 1.00 51.87 N
ATOM 17 C5 G A 46 49.670 162.086 40.359 1.00 52.83 C
ATOM 18 C6 G A 46 49.239 160.787 40.725 1.00 52.41 C
ATOM 19 O6 G A 46 49.494 160.154 41.754 1.00 52.87 O
ATOM 20 N1 G A 46 48.433 160.219 39.741 1.00 52.69 N
ATOM 21 C2 G A 46 48.089 160.820 38.557 1.00 51.72 C
ATOM 22 N2 G A 46 47.303 160.113 37.739 1.00 51.60 N
ATOM 23 N3 G A 46 48.487 162.024 38.202 1.00 51.72 N
ATOM 24 C4 G A 46 49.268 162.597 39.143 1.00 52.34 C
ATOM 25 P C A 47 48.772 168.370 35.407 1.00 48.14 P
ATOM 26 OP1 C A 47 47.411 168.365 34.808 1.00 50.00 O
ATOM 27 OP2 C A 47 49.957 168.619 34.542 1.00 46.67 O
ATOM 28 O5' C A 47 48.756 169.414 36.606 1.00 48.17 O
TER
ATOM 1 O3' C B 73 41.717 160.756 34.523 1.00 47.84 O
ATOM 2 P G B 74 41.467 160.181 36.007 1.00 46.58 P
ATOM 3 OP1 G B 74 40.014 160.142 36.316 1.00 44.48 O
ATOM 4 OP2 G B 74 42.385 160.908 36.917 1.00 47.41 O
ATOM 5 O5' G B 74 41.969 158.676 35.893 1.00 47.16 O
ATOM 6 C5' G B 74 41.296 157.735 35.033 1.00 47.25 C
ATOM 7 C4' G B 74 41.571 156.325 35.493 1.00 47.71 C
ATOM 8 O4' G B 74 42.989 156.033 35.366 1.00 47.74 O
ATOM 9 C3' G B 74 41.262 156.061 36.954 1.00 47.80 C
ATOM 10 O3' G B 74 39.889 155.766 37.135 1.00 50.46 O
ATOM 11 C2' G B 74 42.157 154.873 37.253 1.00 48.13 C
ATOM 12 O2' G B 74 41.617 153.681 36.725 1.00 49.34 O
ATOM 13 C1' G B 74 43.416 155.246 36.464 1.00 47.49 C
ATOM 14 N9 G B 74 44.374 156.034 37.238 1.00 48.10 N
ATOM 15 C8 G B 74 44.709 157.354 37.040 1.00 48.41 C
ATOM 16 N7 G B 74 45.585 157.798 37.899 1.00 47.48 N
ATOM 17 C5 G B 74 45.852 156.706 38.712 1.00 48.79 C
ATOM 18 C6 G B 74 46.725 156.581 39.819 1.00 48.75 C
ATOM 19 O6 G B 74 47.470 157.431 40.313 1.00 50.59 O
ATOM 20 N1 G B 74 46.683 155.305 40.358 1.00 47.11 N
ATOM 21 C2 G B 74 45.911 154.278 39.893 1.00 45.88 C
ATOM 22 N2 G B 74 46.017 153.126 40.552 1.00 46.35 N
ATOM 23 N3 G B 74 45.097 154.374 38.859 1.00 46.89 N
ATOM 24 C4 G B 74 45.115 155.608 38.319 1.00 48.13 C
ATOM 25 P C B 75 39.192 156.047 38.554 1.00 55.09 P
ATOM 26 OP1 C B 75 37.775 155.608 38.432 1.00 53.55 O
ATOM 27 OP2 C B 75 39.493 157.436 38.987 1.00 53.40 O
ATOM 28 O5' C B 75 39.940 155.049 39.542 1.00 55.46 O
TER
Atoms:
OP1: (54.048,167.797,36.015)
OP2: (54.848,166.849,38.250)
C3': (50.291,166.670,36.702)
C1': (49.689,164.773,37.944)
C5': (52.317,165.379,35.787)
O6: (49.494,160.154,41.754)
O4': (50.463,164.302,36.864)
C8: (50.547,164.022,40.233)
C2: (48.089,160.820,38.557)
C6: (49.239,160.787,40.725)
C5: (49.670,162.086,40.359)
C4: (49.268,162.597,39.143)
P: (54.339,166.629,36.878)
C4': (50.836,165.419,36.019)
C2': (50.129,166.216,38.150)
O2': (49.117,166.919,38.837)
N1: (48.433,160.219,39.741)
N2: (47.303,160.113,37.739)
N3: (48.487,162.024,38.202)
N7: (50.472,162.994,41.037)
N9: (49.837,163.846,39.065)
O5': (53.011,165.762,36.974)
O3': (49.014,166.964,36.144)
OP2: (54.848,166.849,38.250)
C3': (50.291,166.670,36.702)
C1': (49.689,164.773,37.944)
C5': (52.317,165.379,35.787)
O6: (49.494,160.154,41.754)
O4': (50.463,164.302,36.864)
C8: (50.547,164.022,40.233)
C2: (48.089,160.820,38.557)
C6: (49.239,160.787,40.725)
C5: (49.670,162.086,40.359)
C4: (49.268,162.597,39.143)
P: (54.339,166.629,36.878)
C4': (50.836,165.419,36.019)
C2': (50.129,166.216,38.150)
O2': (49.117,166.919,38.837)
N1: (48.433,160.219,39.741)
N2: (47.303,160.113,37.739)
N3: (48.487,162.024,38.202)
N7: (50.472,162.994,41.037)
N9: (49.837,163.846,39.065)
O5': (53.011,165.762,36.974)
O3': (49.014,166.964,36.144)
OP1: (40.014,160.142,36.316)
OP2: (42.385,160.908,36.917)
C3': (41.262,156.061,36.954)
C1': (43.416,155.246,36.464)
C5': (41.296,157.735,35.033)
O6: (47.470,157.431,40.313)
O4': (42.989,156.033,35.366)
C8: (44.709,157.354,37.040)
C2: (45.911,154.278,39.893)
C6: (46.725,156.581,39.819)
C5: (45.852,156.706,38.712)
C4: (45.115,155.608,38.319)
P: (41.467,160.181,36.007)
C4': (41.571,156.325,35.493)
C2': (42.157,154.873,37.253)
O2': (41.617,153.681,36.725)
N1: (46.683,155.305,40.358)
N2: (46.017,153.126,40.552)
N3: (45.097,154.374,38.859)
N7: (45.585,157.798,37.899)
N9: (44.374,156.034,37.238)
O5': (41.969,158.676,35.893)
O3': (39.889,155.766,37.135)
OP2: (42.385,160.908,36.917)
C3': (41.262,156.061,36.954)
C1': (43.416,155.246,36.464)
C5': (41.296,157.735,35.033)
O6: (47.470,157.431,40.313)
O4': (42.989,156.033,35.366)
C8: (44.709,157.354,37.040)
C2: (45.911,154.278,39.893)
C6: (46.725,156.581,39.819)
C5: (45.852,156.706,38.712)
C4: (45.115,155.608,38.319)
P: (41.467,160.181,36.007)
C4': (41.571,156.325,35.493)
C2': (42.157,154.873,37.253)
O2': (41.617,153.681,36.725)
N1: (46.683,155.305,40.358)
N2: (46.017,153.126,40.552)
N3: (45.097,154.374,38.859)
N7: (45.585,157.798,37.899)
N9: (44.374,156.034,37.238)
O5': (41.969,158.676,35.893)
O3': (39.889,155.766,37.135)
Image (generated by PyMOL):