Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0592:0595
Extra
PDB:
ATOM 1 O3' A A 591 -5.647 134.213 88.298 1.00 86.11 O
ATOM 2 P G A 592 -5.018 135.158 89.447 1.00 87.40 P
ATOM 3 OP1 G A 592 -5.961 135.251 90.595 1.00 87.32 O
ATOM 4 OP2 G A 592 -4.575 136.401 88.762 1.00 87.06 O
ATOM 5 O5' G A 592 -3.701 134.382 89.917 1.00 85.17 O
ATOM 6 C5' G A 592 -2.748 135.002 90.815 1.00 80.03 C
ATOM 7 C4' G A 592 -1.872 133.950 91.474 1.00 76.54 C
ATOM 8 O4' G A 592 -1.095 133.238 90.468 1.00 75.37 O
ATOM 9 C3' G A 592 -0.854 134.487 92.481 1.00 75.20 C
ATOM 10 O3' G A 592 -0.594 133.527 93.505 1.00 74.94 O
ATOM 11 C2' G A 592 0.414 134.588 91.643 1.00 74.19 C
ATOM 12 O2' G A 592 1.588 134.542 92.433 1.00 73.26 O
ATOM 13 C1' G A 592 0.283 133.335 90.778 1.00 73.20 C
ATOM 14 N9 G A 592 1.049 133.348 89.533 1.00 70.63 N
ATOM 15 C8 G A 592 1.365 134.441 88.761 1.00 69.16 C
ATOM 16 N7 G A 592 2.069 134.136 87.705 1.00 68.26 N
ATOM 17 C5 G A 592 2.229 132.760 87.780 1.00 68.70 C
ATOM 18 C6 G A 592 2.908 131.864 86.910 1.00 67.64 C
ATOM 19 O6 G A 592 3.534 132.120 85.877 1.00 68.05 O
ATOM 20 N1 G A 592 2.812 130.551 87.352 1.00 66.64 N
ATOM 21 C2 G A 592 2.160 130.148 88.487 1.00 68.00 C
ATOM 22 N2 G A 592 2.185 128.833 88.738 1.00 68.07 N
ATOM 23 N3 G A 592 1.530 130.970 89.315 1.00 68.27 N
ATOM 24 C4 G A 592 1.603 132.254 88.900 1.00 69.08 C
ATOM 25 P C A 593 -1.810 132.861 94.316 1.00 73.52 P
ATOM 26 OP1 C A 593 -2.939 133.831 94.357 1.00 73.13 O
ATOM 27 OP2 C A 593 -1.254 132.326 95.591 1.00 71.15 O
ATOM 28 O5' C A 593 -2.235 131.636 93.385 1.00 68.63 O
TER
ATOM 1 O3' C B 594 1.593 122.887 91.567 1.00 46.67 O
ATOM 2 P G B 595 3.156 123.272 91.545 1.00 46.79 P
ATOM 3 OP1 G B 595 3.859 122.349 92.476 1.00 48.18 O
ATOM 4 OP2 G B 595 3.267 124.743 91.744 1.00 45.25 O
ATOM 5 O5' G B 595 3.627 122.913 90.066 1.00 45.20 O
ATOM 6 C5' G B 595 3.504 121.575 89.558 1.00 41.60 C
ATOM 7 C4' G B 595 3.686 121.563 88.057 1.00 43.37 C
ATOM 8 O4' G B 595 2.713 122.441 87.430 1.00 43.15 O
ATOM 9 C3' G B 595 5.013 122.089 87.540 1.00 43.41 C
ATOM 10 O3' G B 595 6.018 121.091 87.622 1.00 46.06 O
ATOM 11 C2' G B 595 4.678 122.430 86.096 1.00 39.96 C
ATOM 12 O2' G B 595 4.610 121.284 85.282 1.00 41.56 O
ATOM 13 C1' G B 595 3.266 122.989 86.243 1.00 39.35 C
ATOM 14 N9 G B 595 3.249 124.441 86.344 1.00 37.13 N
ATOM 15 C8 G B 595 2.931 125.200 87.443 1.00 36.75 C
ATOM 16 N7 G B 595 3.019 126.483 87.220 1.00 37.17 N
ATOM 17 C5 G B 595 3.413 126.574 85.892 1.00 36.80 C
ATOM 18 C6 G B 595 3.674 127.709 85.088 1.00 37.93 C
ATOM 19 O6 G B 595 3.595 128.907 85.396 1.00 40.66 O
ATOM 20 N1 G B 595 4.065 127.346 83.802 1.00 35.27 N
ATOM 21 C2 G B 595 4.184 126.060 83.348 1.00 35.31 C
ATOM 22 N2 G B 595 4.582 125.912 82.072 1.00 34.77 N
ATOM 23 N3 G B 595 3.935 124.994 84.086 1.00 35.76 N
ATOM 24 C4 G B 595 3.559 125.323 85.339 1.00 36.66 C
ATOM 25 P A B 596 7.498 121.492 88.095 1.00 48.00 P
ATOM 26 OP1 A B 596 8.341 120.286 87.865 1.00 45.27 O
ATOM 27 OP2 A B 596 7.436 122.116 89.448 1.00 45.37 O
ATOM 28 O5' A B 596 7.935 122.634 87.077 1.00 46.41 O
TER
ATOM 2 P G A 592 -5.018 135.158 89.447 1.00 87.40 P
ATOM 3 OP1 G A 592 -5.961 135.251 90.595 1.00 87.32 O
ATOM 4 OP2 G A 592 -4.575 136.401 88.762 1.00 87.06 O
ATOM 5 O5' G A 592 -3.701 134.382 89.917 1.00 85.17 O
ATOM 6 C5' G A 592 -2.748 135.002 90.815 1.00 80.03 C
ATOM 7 C4' G A 592 -1.872 133.950 91.474 1.00 76.54 C
ATOM 8 O4' G A 592 -1.095 133.238 90.468 1.00 75.37 O
ATOM 9 C3' G A 592 -0.854 134.487 92.481 1.00 75.20 C
ATOM 10 O3' G A 592 -0.594 133.527 93.505 1.00 74.94 O
ATOM 11 C2' G A 592 0.414 134.588 91.643 1.00 74.19 C
ATOM 12 O2' G A 592 1.588 134.542 92.433 1.00 73.26 O
ATOM 13 C1' G A 592 0.283 133.335 90.778 1.00 73.20 C
ATOM 14 N9 G A 592 1.049 133.348 89.533 1.00 70.63 N
ATOM 15 C8 G A 592 1.365 134.441 88.761 1.00 69.16 C
ATOM 16 N7 G A 592 2.069 134.136 87.705 1.00 68.26 N
ATOM 17 C5 G A 592 2.229 132.760 87.780 1.00 68.70 C
ATOM 18 C6 G A 592 2.908 131.864 86.910 1.00 67.64 C
ATOM 19 O6 G A 592 3.534 132.120 85.877 1.00 68.05 O
ATOM 20 N1 G A 592 2.812 130.551 87.352 1.00 66.64 N
ATOM 21 C2 G A 592 2.160 130.148 88.487 1.00 68.00 C
ATOM 22 N2 G A 592 2.185 128.833 88.738 1.00 68.07 N
ATOM 23 N3 G A 592 1.530 130.970 89.315 1.00 68.27 N
ATOM 24 C4 G A 592 1.603 132.254 88.900 1.00 69.08 C
ATOM 25 P C A 593 -1.810 132.861 94.316 1.00 73.52 P
ATOM 26 OP1 C A 593 -2.939 133.831 94.357 1.00 73.13 O
ATOM 27 OP2 C A 593 -1.254 132.326 95.591 1.00 71.15 O
ATOM 28 O5' C A 593 -2.235 131.636 93.385 1.00 68.63 O
TER
ATOM 1 O3' C B 594 1.593 122.887 91.567 1.00 46.67 O
ATOM 2 P G B 595 3.156 123.272 91.545 1.00 46.79 P
ATOM 3 OP1 G B 595 3.859 122.349 92.476 1.00 48.18 O
ATOM 4 OP2 G B 595 3.267 124.743 91.744 1.00 45.25 O
ATOM 5 O5' G B 595 3.627 122.913 90.066 1.00 45.20 O
ATOM 6 C5' G B 595 3.504 121.575 89.558 1.00 41.60 C
ATOM 7 C4' G B 595 3.686 121.563 88.057 1.00 43.37 C
ATOM 8 O4' G B 595 2.713 122.441 87.430 1.00 43.15 O
ATOM 9 C3' G B 595 5.013 122.089 87.540 1.00 43.41 C
ATOM 10 O3' G B 595 6.018 121.091 87.622 1.00 46.06 O
ATOM 11 C2' G B 595 4.678 122.430 86.096 1.00 39.96 C
ATOM 12 O2' G B 595 4.610 121.284 85.282 1.00 41.56 O
ATOM 13 C1' G B 595 3.266 122.989 86.243 1.00 39.35 C
ATOM 14 N9 G B 595 3.249 124.441 86.344 1.00 37.13 N
ATOM 15 C8 G B 595 2.931 125.200 87.443 1.00 36.75 C
ATOM 16 N7 G B 595 3.019 126.483 87.220 1.00 37.17 N
ATOM 17 C5 G B 595 3.413 126.574 85.892 1.00 36.80 C
ATOM 18 C6 G B 595 3.674 127.709 85.088 1.00 37.93 C
ATOM 19 O6 G B 595 3.595 128.907 85.396 1.00 40.66 O
ATOM 20 N1 G B 595 4.065 127.346 83.802 1.00 35.27 N
ATOM 21 C2 G B 595 4.184 126.060 83.348 1.00 35.31 C
ATOM 22 N2 G B 595 4.582 125.912 82.072 1.00 34.77 N
ATOM 23 N3 G B 595 3.935 124.994 84.086 1.00 35.76 N
ATOM 24 C4 G B 595 3.559 125.323 85.339 1.00 36.66 C
ATOM 25 P A B 596 7.498 121.492 88.095 1.00 48.00 P
ATOM 26 OP1 A B 596 8.341 120.286 87.865 1.00 45.27 O
ATOM 27 OP2 A B 596 7.436 122.116 89.448 1.00 45.37 O
ATOM 28 O5' A B 596 7.935 122.634 87.077 1.00 46.41 O
TER
Atoms:
OP1: (-5.961,135.251,90.595)
OP2: (-4.575,136.401,88.762)
C3': (-0.854,134.487,92.481)
C1': (0.283,133.335,90.778)
C5': (-2.748,135.002,90.815)
O6: (3.534,132.120,85.877)
O4': (-1.095,133.238,90.468)
C8: (1.365,134.441,88.761)
C2: (2.160,130.148,88.487)
C6: (2.908,131.864,86.910)
C5: (2.229,132.760,87.780)
C4: (1.603,132.254,88.900)
P: (-5.018,135.158,89.447)
C4': (-1.872,133.950,91.474)
C2': (0.414,134.588,91.643)
O2': (1.588,134.542,92.433)
N1: (2.812,130.551,87.352)
N2: (2.185,128.833,88.738)
N3: (1.530,130.970,89.315)
N7: (2.069,134.136,87.705)
N9: (1.049,133.348,89.533)
O5': (-3.701,134.382,89.917)
O3': (-0.594,133.527,93.505)
OP2: (-4.575,136.401,88.762)
C3': (-0.854,134.487,92.481)
C1': (0.283,133.335,90.778)
C5': (-2.748,135.002,90.815)
O6: (3.534,132.120,85.877)
O4': (-1.095,133.238,90.468)
C8: (1.365,134.441,88.761)
C2: (2.160,130.148,88.487)
C6: (2.908,131.864,86.910)
C5: (2.229,132.760,87.780)
C4: (1.603,132.254,88.900)
P: (-5.018,135.158,89.447)
C4': (-1.872,133.950,91.474)
C2': (0.414,134.588,91.643)
O2': (1.588,134.542,92.433)
N1: (2.812,130.551,87.352)
N2: (2.185,128.833,88.738)
N3: (1.530,130.970,89.315)
N7: (2.069,134.136,87.705)
N9: (1.049,133.348,89.533)
O5': (-3.701,134.382,89.917)
O3': (-0.594,133.527,93.505)
OP1: (3.859,122.349,92.476)
OP2: (3.267,124.743,91.744)
C3': (5.013,122.089,87.540)
C1': (3.266,122.989,86.243)
C5': (3.504,121.575,89.558)
O6: (3.595,128.907,85.396)
O4': (2.713,122.441,87.430)
C8: (2.931,125.200,87.443)
C2: (4.184,126.060,83.348)
C6: (3.674,127.709,85.088)
C5: (3.413,126.574,85.892)
C4: (3.559,125.323,85.339)
P: (3.156,123.272,91.545)
C4': (3.686,121.563,88.057)
C2': (4.678,122.430,86.096)
O2': (4.610,121.284,85.282)
N1: (4.065,127.346,83.802)
N2: (4.582,125.912,82.072)
N3: (3.935,124.994,84.086)
N7: (3.019,126.483,87.220)
N9: (3.249,124.441,86.344)
O5': (3.627,122.913,90.066)
O3': (6.018,121.091,87.622)
OP2: (3.267,124.743,91.744)
C3': (5.013,122.089,87.540)
C1': (3.266,122.989,86.243)
C5': (3.504,121.575,89.558)
O6: (3.595,128.907,85.396)
O4': (2.713,122.441,87.430)
C8: (2.931,125.200,87.443)
C2: (4.184,126.060,83.348)
C6: (3.674,127.709,85.088)
C5: (3.413,126.574,85.892)
C4: (3.559,125.323,85.339)
P: (3.156,123.272,91.545)
C4': (3.686,121.563,88.057)
C2': (4.678,122.430,86.096)
O2': (4.610,121.284,85.282)
N1: (4.065,127.346,83.802)
N2: (4.582,125.912,82.072)
N3: (3.935,124.994,84.086)
N7: (3.019,126.483,87.220)
N9: (3.249,124.441,86.344)
O5': (3.627,122.913,90.066)
O3': (6.018,121.091,87.622)
Image (generated by PyMOL):